| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is ycaI [C]
Identifier: 68535644
GI number: 68535644
Start: 691680
End: 693530
Strand: Direct
Name: ycaI [C]
Synonym: jk0572
Alternate gene names: 68535644
Gene position: 691680-693530 (Clockwise)
Preceding gene: 68535643
Following gene: 68535645
Centisome position: 28.09
GC content: 63.48
Gene sequence:
>1851_bases ATGGTTGCTGCGATAATCCTGACCCGCAGCTTCTGGCCGCTTGCCATTGGAGGGTTCATCACGCTCGCCAGCTCCGTGTG GTGGTGGCGCGCCCGCCGCAGCTACGGAGCCCCGTGGCGTCGCCTTCTCGCGCGCAGCCTCGCCACCGTCGGCGCTGTCG CCAGCGCGGTGGGCCTGGGCACGTGGTGGCGGATCTTTCTTATTGACGCCCAACCGCTGCTGCAGAATCTCTCCACCCAA TCGGGCAGTGTGCAGCAGCGAGTGACGGTGGTGGGATTGCCGAAGCAAGTCGCGGAGGGGACGGTGCTGGTTCCCGTGGA TGTCGACAGCCTGGGAGAGGTGCCTCTCTTTCTACGTCCCGACCTAGCCGGTGCCGGTGCTGGTGCTGGAGGCGTCGGAG TAGGCGGAGCGGGCGGAGGCACAGTGGGCGCCGGCGACCTCACGGCTCTACAACCCGGCATGAGCTTCGACATCGCCGCC AACATGCGCCCTGCTCGCGGGGCGGAGATGGTGCCCGTCACTCTGTCTGCCACGCGCGCGCCGGAAAATATTAGCGATCC GGAGGGAATATGGGGTGTTACCGCCTGGCTGCGCCGAGACTTCGACGCGCTGTGCGTGGACCTGCCGTGGGAAGCTGGGA AGATCCTACCCGGCATGGTGATGGGGGACGTCAGTATGCAGGATTCCACCCTACGCAACCAGTTCGCCGTCACGGGGCTA AGCCACCTTAGTGCGGTCTCGGGCTCTAATGTCGCAGTCGTTACCGGAGCCGCGTTGGTGCTGGCCACGGCTTGTCGGGC GGGGCGCCTCAGCCGGCTGCTGGTAGCAGCTGGTGCCCTGGTGGCCTTTGTGCTGCTGGTCGGCCCAGAACCCAGTGTGC TGCGCGCAGCAATTATGGGCTGCGTTGGGCTGGTGGCAGTGGCCTCGGCTCGATGGACGGATATCATCGCCTCCTTGAGC GCGGCCATCATCGTGCTGATGGTGCTTTCCCCAAGCATGGCCATTAGCTATGCCTTCGTGCTTTCGGTGGTGGCGACGGC GGGCATCGTTGTGGTTTTGCCTTGGTGGTCGAAAGCCGTGCTGGCCAGGATGCCGCTGTTTCCCTGGCTTCCGGCCCACG AACGGCCGACTCAGCTGCAGGCGATGGTGGTGCGAATGGTTCTGGTGGCAATCGCAGCGGACTTGGTGACCATTCCGATC ATCGTCCATATGACGGGGAAAGTCTCCCTGGTAGCGGTGGTCTGCAACCTTGCGGTGACGGTAGTGGTTCCAGTGATCAC TGTGCTGGGGCTTATGGCTGCTCTGCTGGCGGCGATTTATCCACCGGTGACGATGTTGTTGGCCAAGATCATTATCGCGC CTGCTGTGCCTTGTGCTGCATGGGTGTTGCAGGTGGCCCGCATGGGGTCCGGAGCGCCGATGCTCGCCACCCCAGGAGGA TGGGCATGGGCGGGGATCGCCAGCGCACTGTTGGCAGTTTTGCTGTTGAGCGTGCGCTATGCCCGTTACTGGCGAACACT CCGGTGGGGCTGGGCCACGCTTATGTGCGGGGTGCTGATGATAGGGGTGTGGGGACGAGGGGGCGTCATAAAACTAGAAA AACCAGACGCACCCGCGACAATCCAGACAGGGCCGGTGGACCTTACCAGCAAGGTAGTGTTTCAAGTTCGAGACGACGAC CAAGCGATGCGGCAGCTACAAACGATCGACACAGCCGTAGCGGAGAGAGGGGGAGCGCAACAGGTGGCTGTGGTCGTAAC GCAGTGTGGGAAACCGCACGACAGGCCCAGCTTTATGCCCAACGGGGTGCCCGTGTACTACCCGTGCAAGGACAAGGTGG AGTTCCGTTAG
Upstream 100 bases:
>100_bases GGCACCGCAAGAATCGCCGGAGCCGTTCAGCCCGGAGGCCGTCACCAAAGCTCGTGGCGTCGATCTGCGGCTGGTTCCCG TCGCGCTTGGGTGTTGGCTT
Downstream 100 bases:
>100_bases AAGTGTCGTGCACAGATCTGGCAAGATCGAACCCATGAACCGCCCCGAGCATCCCGCACCCATCAACCTGATCGTCGGCG GCGATGACTTCCTGGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Internalization-Related Competence; Integral Membrane Protein; ComEC/Rec2-Like Protein; Competence Protein; Hydrolase-Like Protein; ComEC/Rec2-Related Domain-Containing Protein; ComEC Operon Protein; DNA Internalization Competence; Competence Protein ComEC
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MVAAIILTRSFWPLAIGGFITLASSVWWWRARRSYGAPWRRLLARSLATVGAVASAVGLGTWWRIFLIDAQPLLQNLSTQ SGSVQQRVTVVGLPKQVAEGTVLVPVDVDSLGEVPLFLRPDLAGAGAGAGGVGVGGAGGGTVGAGDLTALQPGMSFDIAA NMRPARGAEMVPVTLSATRAPENISDPEGIWGVTAWLRRDFDALCVDLPWEAGKILPGMVMGDVSMQDSTLRNQFAVTGL SHLSAVSGSNVAVVTGAALVLATACRAGRLSRLLVAAGALVAFVLLVGPEPSVLRAAIMGCVGLVAVASARWTDIIASLS AAIIVLMVLSPSMAISYAFVLSVVATAGIVVVLPWWSKAVLARMPLFPWLPAHERPTQLQAMVVRMVLVAIAADLVTIPI IVHMTGKVSLVAVVCNLAVTVVVPVITVLGLMAALLAAIYPPVTMLLAKIIIAPAVPCAAWVLQVARMGSGAPMLATPGG WAWAGIASALLAVLLLSVRYARYWRTLRWGWATLMCGVLMIGVWGRGGVIKLEKPDAPATIQTGPVDLTSKVVFQVRDDD QAMRQLQTIDTAVAERGGAQQVAVVVTQCGKPHDRPSFMPNGVPVYYPCKDKVEFR
Sequences:
>Translated_616_residues MVAAIILTRSFWPLAIGGFITLASSVWWWRARRSYGAPWRRLLARSLATVGAVASAVGLGTWWRIFLIDAQPLLQNLSTQ SGSVQQRVTVVGLPKQVAEGTVLVPVDVDSLGEVPLFLRPDLAGAGAGAGGVGVGGAGGGTVGAGDLTALQPGMSFDIAA NMRPARGAEMVPVTLSATRAPENISDPEGIWGVTAWLRRDFDALCVDLPWEAGKILPGMVMGDVSMQDSTLRNQFAVTGL SHLSAVSGSNVAVVTGAALVLATACRAGRLSRLLVAAGALVAFVLLVGPEPSVLRAAIMGCVGLVAVASARWTDIIASLS AAIIVLMVLSPSMAISYAFVLSVVATAGIVVVLPWWSKAVLARMPLFPWLPAHERPTQLQAMVVRMVLVAIAADLVTIPI IVHMTGKVSLVAVVCNLAVTVVVPVITVLGLMAALLAAIYPPVTMLLAKIIIAPAVPCAAWVLQVARMGSGAPMLATPGG WAWAGIASALLAVLLLSVRYARYWRTLRWGWATLMCGVLMIGVWGRGGVIKLEKPDAPATIQTGPVDLTSKVVFQVRDDD QAMRQLQTIDTAVAERGGAQQVAVVVTQCGKPHDRPSFMPNGVPVYYPCKDKVEFR >Mature_616_residues MVAAIILTRSFWPLAIGGFITLASSVWWWRARRSYGAPWRRLLARSLATVGAVASAVGLGTWWRIFLIDAQPLLQNLSTQ SGSVQQRVTVVGLPKQVAEGTVLVPVDVDSLGEVPLFLRPDLAGAGAGAGGVGVGGAGGGTVGAGDLTALQPGMSFDIAA NMRPARGAEMVPVTLSATRAPENISDPEGIWGVTAWLRRDFDALCVDLPWEAGKILPGMVMGDVSMQDSTLRNQFAVTGL SHLSAVSGSNVAVVTGAALVLATACRAGRLSRLLVAAGALVAFVLLVGPEPSVLRAAIMGCVGLVAVASARWTDIIASLS AAIIVLMVLSPSMAISYAFVLSVVATAGIVVVLPWWSKAVLARMPLFPWLPAHERPTQLQAMVVRMVLVAIAADLVTIPI IVHMTGKVSLVAVVCNLAVTVVVPVITVLGLMAALLAAIYPPVTMLLAKIIIAPAVPCAAWVLQVARMGSGAPMLATPGG WAWAGIASALLAVLLLSVRYARYWRTLRWGWATLMCGVLMIGVWGRGGVIKLEKPDAPATIQTGPVDLTSKVVFQVRDDD QAMRQLQTIDTAVAERGGAQQVAVVVTQCGKPHDRPSFMPNGVPVYYPCKDKVEFR
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64659; Mature: 64659
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAAIILTRSFWPLAIGGFITLASSVWWWRARRSYGAPWRRLLARSLATVGAVASAVGLG CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC TWWRIFLIDAQPLLQNLSTQSGSVQQRVTVVGLPKQVAEGTVLVPVDVDSLGEVPLFLRP CEEEEEEEECHHHHHHCCCCCCCHHHEEEEEECCHHHHCCEEEEEECCCCCCCCCEEECC DLAGAGAGAGGVGVGGAGGGTVGAGDLTALQPGMSFDIAANMRPARGAEMVPVTLSATRA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCEEEEEEECCCC PENISDPEGIWGVTAWLRRDFDALCVDLPWEAGKILPGMVMGDVSMQDSTLRNQFAVTGL CCCCCCCCCHHHHHHHHHCCCHHEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHH SHLSAVSGSNVAVVTGAALVLATACRAGRLSRLLVAAGALVAFVLLVGPEPSVLRAAIMG HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH CVGLVAVASARWTDIIASLSAAIIVLMVLSPSMAISYAFVLSVVATAGIVVVLPWWSKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCHHHHH LARMPLFPWLPAHERPTQLQAMVVRMVLVAIAADLVTIPIIVHMTGKVSLVAVVCNLAVT HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH VVVPVITVLGLMAALLAAIYPPVTMLLAKIIIAPAVPCAAWVLQVARMGSGAPMLATPGG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCC WAWAGIASALLAVLLLSVRYARYWRTLRWGWATLMCGVLMIGVWGRGGVIKLEKPDAPAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE IQTGPVDLTSKVVFQVRDDDQAMRQLQTIDTAVAERGGAQQVAVVVTQCGKPHDRPSFMP EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCC NGVPVYYPCKDKVEFR CCCEEEECCCCCCCCC >Mature Secondary Structure MVAAIILTRSFWPLAIGGFITLASSVWWWRARRSYGAPWRRLLARSLATVGAVASAVGLG CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC TWWRIFLIDAQPLLQNLSTQSGSVQQRVTVVGLPKQVAEGTVLVPVDVDSLGEVPLFLRP CEEEEEEEECHHHHHHCCCCCCCHHHEEEEEECCHHHHCCEEEEEECCCCCCCCCEEECC DLAGAGAGAGGVGVGGAGGGTVGAGDLTALQPGMSFDIAANMRPARGAEMVPVTLSATRA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCEEEEEEECCCC PENISDPEGIWGVTAWLRRDFDALCVDLPWEAGKILPGMVMGDVSMQDSTLRNQFAVTGL CCCCCCCCCHHHHHHHHHCCCHHEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHH SHLSAVSGSNVAVVTGAALVLATACRAGRLSRLLVAAGALVAFVLLVGPEPSVLRAAIMG HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH CVGLVAVASARWTDIIASLSAAIIVLMVLSPSMAISYAFVLSVVATAGIVVVLPWWSKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCHHHHH LARMPLFPWLPAHERPTQLQAMVVRMVLVAIAADLVTIPIIVHMTGKVSLVAVVCNLAVT HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHH VVVPVITVLGLMAALLAAIYPPVTMLLAKIIIAPAVPCAAWVLQVARMGSGAPMLATPGG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCC WAWAGIASALLAVLLLSVRYARYWRTLRWGWATLMCGVLMIGVWGRGGVIKLEKPDAPAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCE IQTGPVDLTSKVVFQVRDDDQAMRQLQTIDTAVAERGGAQQVAVVVTQCGKPHDRPSFMP EECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCCC NGVPVYYPCKDKVEFR CCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA