| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is pabA [H]
Identifier: 68535098
GI number: 68535098
Start: 40841
End: 41569
Strand: Direct
Name: pabA [H]
Synonym: jk0036
Alternate gene names: 68535098
Gene position: 40841-41569 (Clockwise)
Preceding gene: 68535096
Following gene: 68535107
Centisome position: 1.66
GC content: 62.28
Gene sequence:
>729_bases ATGCGCATTCTCGTGATCGACAACTACGACAGCTTCGTTTACAACCTCGTGCAATACATCGGGCAGCTGGGCTTCAGCGG GGACGACTGTGTGGTGTTGCGCAATGACGCCCCCGAGCTCACAGGTGCCGGCAACCCAGACGGAGCTGACACGGATGCGC TGGCTAACATGCTGCAGGGCTTCGACGCGATCCTGCTATCCCCCGGGCCCGGCGAACCAAGCGCGGCCGGCTGCATGCTG GACGTGTTGAAAATCGCGGTTGAAAAGCAGATTCCGCTGTTCGGAGTGTGCCTGGGGCACCAGGCGATCGGCATGCACTT CGGCGCGAAGGTCGTTCGGGCAGACGAACTCTTCCACGGCAAAACTTCGCCCGTGACCCACGACGGTACTGGCGTGCTGG CCGGGGTGCCGAGCCCGTTCCGGGTGACGCGCTACCACTCGCTCACCGTTGATCCCGACACTGTACCGGAGGAACTGAAG GTCACAGCGACTTCCGATTCCGGCATGATTATGGCGATGCGCCACCAGACGCTGCCGGTCCACTCCGTACAGTTTCACCC CGAGTCCGTGATGACACAGTACGGCCACCTGATGCTGGCGAACTGGCTGAACGAAGCCGGGCGGTTGAACGGCACGGGCG AGGTAGTTCCAGCCGAGCTAGTGAATCGCCTAGTGCAGGAGCAGCTAGAGGTCACCGGCGCCATCAGCGCCGAAGCCTCG ATGCTTTAG
Upstream 100 bases:
>100_bases CCTACGAGGTACCGAGCGCCCATGGGCAAAATACGTACCAAACGATAGTACCAGCACACCACGGCAAAACTATGCATGCT GCCGCGCTAGACTCTTTGCT
Downstream 100 bases:
>100_bases GGTCCGCTGAGAGGCGCTGCTGCTATTAGGGCAGCAGGTTGAAGACGTACACCGTCACGGTGATGTCCTCGTCCCGCTTA ATCACCTGACCACTATGGAT
Product: para-aminobenzoate synthase component II
Products: NA
Alternate protein names: Anthranilate synthase component II; Glutamine amido-transferase [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MRILVIDNYDSFVYNLVQYIGQLGFSGDDCVVLRNDAPELTGAGNPDGADTDALANMLQGFDAILLSPGPGEPSAAGCML DVLKIAVEKQIPLFGVCLGHQAIGMHFGAKVVRADELFHGKTSPVTHDGTGVLAGVPSPFRVTRYHSLTVDPDTVPEELK VTATSDSGMIMAMRHQTLPVHSVQFHPESVMTQYGHLMLANWLNEAGRLNGTGEVVPAELVNRLVQEQLEVTGAISAEAS ML
Sequences:
>Translated_242_residues MRILVIDNYDSFVYNLVQYIGQLGFSGDDCVVLRNDAPELTGAGNPDGADTDALANMLQGFDAILLSPGPGEPSAAGCML DVLKIAVEKQIPLFGVCLGHQAIGMHFGAKVVRADELFHGKTSPVTHDGTGVLAGVPSPFRVTRYHSLTVDPDTVPEELK VTATSDSGMIMAMRHQTLPVHSVQFHPESVMTQYGHLMLANWLNEAGRLNGTGEVVPAELVNRLVQEQLEVTGAISAEAS ML >Mature_242_residues MRILVIDNYDSFVYNLVQYIGQLGFSGDDCVVLRNDAPELTGAGNPDGADTDALANMLQGFDAILLSPGPGEPSAAGCML DVLKIAVEKQIPLFGVCLGHQAIGMHFGAKVVRADELFHGKTSPVTHDGTGVLAGVPSPFRVTRYHSLTVDPDTVPEELK VTATSDSGMIMAMRHQTLPVHSVQFHPESVMTQYGHLMLANWLNEAGRLNGTGEVVPAELVNRLVQEQLEVTGAISAEAS ML
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI18105007, Length=174, Percent_Identity=29.3103448275862, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789760, Length=203, Percent_Identity=48.7684729064039, Blast_Score=188, Evalue=3e-49, Organism=Escherichia coli, GI1787517, Length=201, Percent_Identity=41.2935323383085, Blast_Score=137, Evalue=5e-34, Organism=Escherichia coli, GI1786215, Length=129, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193204318, Length=130, Percent_Identity=33.8461538461538, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6322638, Length=216, Percent_Identity=43.0555555555556, Blast_Score=167, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6324361, Length=215, Percent_Identity=31.6279069767442, Blast_Score=93, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6322331, Length=135, Percent_Identity=34.0740740740741, Blast_Score=69, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6324878, Length=139, Percent_Identity=30.9352517985612, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI45555749, Length=134, Percent_Identity=33.5820895522388, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642586, Length=134, Percent_Identity=33.5820895522388, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 25865; Mature: 25865
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVIDNYDSFVYNLVQYIGQLGFSGDDCVVLRNDAPELTGAGNPDGADTDALANMLQG CEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC FDAILLSPGPGEPSAAGCMLDVLKIAVEKQIPLFGVCLGHQAIGMHFGAKVVRADELFHG CCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCHHEEEHHHHHCC KTSPVTHDGTGVLAGVPSPFRVTRYHSLTVDPDTVPEELKVTATSDSGMIMAMRHQTLPV CCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCC HSVQFHPESVMTQYGHLMLANWLNEAGRLNGTGEVVPAELVNRLVQEQLEVTGAISAEAS EEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC ML CC >Mature Secondary Structure MRILVIDNYDSFVYNLVQYIGQLGFSGDDCVVLRNDAPELTGAGNPDGADTDALANMLQG CEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC FDAILLSPGPGEPSAAGCMLDVLKIAVEKQIPLFGVCLGHQAIGMHFGAKVVRADELFHG CCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCHHEEEHHHHHCC KTSPVTHDGTGVLAGVPSPFRVTRYHSLTVDPDTVPEELKVTATSDSGMIMAMRHQTLPV CCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCC HSVQFHPESVMTQYGHLMLANWLNEAGRLNGTGEVVPAELVNRLVQEQLEVTGAISAEAS EEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC ML CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]