Click here to switch to the map view.

The map label for this gene is 68535107

Identifier: 68535107

GI number: 68535107

Start: 54224

End: 54811

Strand: Direct

Name: 68535107

Synonym: jk0045

Alternate gene names: NA

Gene position: 54224-54811 (Clockwise)

Preceding gene: 68535098

Following gene: 68535110

Centisome position: 2.2

GC content: 53.74

Gene sequence:

>588_bases
GTGTTTCCGGAGTTGATTGCCAATCCTGTGCGTTCTGTAGCCGTATTTACAGGGGCGAGCAGTGGTCGCAACCATTCCAA
TGCCATGCTTGCTGAAGCCCTAGGGGCGGGTCTAGCTGAGCAGGGCGTACGGATGATTTATGGTGGCGGCAAGGTCGGCC
TTATGGGTGCTGCGGCGGATGCCTGTCTGGCCAACGGTGGCTGTGTAATCGGTGTGATTCCTCAGAATCTTGTCGATGGC
GAAATTGCACATGCGGGTCTTTCGCACCTTGAGATTGTTGACACGATGTATCAGCGTAAGCAACGGATGAGTGACCTGGT
CGATGCCTACGTGTGTTTGCCTGGCGGCGCTGGAACGTTAGACGAATTTTTTGATGCGTGGACAGCTCAACAGCTCGGGC
TTCATCGCAAGCCCATTGCCCTTTTTGGTTCAAGTTTCTGGGCGCCTACGGTATCGATGCTCAAGCATATGGCAGACGAG
GGATTTATTCGTCAAGATGATGTCGACACGCTTATTGTTGCCGACACCGTTGATGAACTTCTCGTCGCACTCAATTCTTG
GGCTGCGCCGTGCCCCAAGTGGAATTAG

Upstream 100 bases:

>100_bases
AGATTCGGTGGAGCCCGTGGCAGCTGCAGAAATTGCTGAGTGCGAATGGGTAAACCCGTCCGTGCCGAACGTTAAGCTGG
CACCGCTTTTGAAAGATGAA

Downstream 100 bases:

>100_bases
TTTCTAAGTTGTATTGCAATAAGTACCGAGTAAAGCGATCTTTATTTGCATCTGCTGGGCTGAACGCTATACCGCAAACG
GGTCGTGGTCCGGTTCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MFPELIANPVRSVAVFTGASSGRNHSNAMLAEALGAGLAEQGVRMIYGGGKVGLMGAAADACLANGGCVIGVIPQNLVDG
EIAHAGLSHLEIVDTMYQRKQRMSDLVDAYVCLPGGAGTLDEFFDAWTAQQLGLHRKPIALFGSSFWAPTVSMLKHMADE
GFIRQDDVDTLIVADTVDELLVALNSWAAPCPKWN

Sequences:

>Translated_195_residues
MFPELIANPVRSVAVFTGASSGRNHSNAMLAEALGAGLAEQGVRMIYGGGKVGLMGAAADACLANGGCVIGVIPQNLVDG
EIAHAGLSHLEIVDTMYQRKQRMSDLVDAYVCLPGGAGTLDEFFDAWTAQQLGLHRKPIALFGSSFWAPTVSMLKHMADE
GFIRQDDVDTLIVADTVDELLVALNSWAAPCPKWN
>Mature_195_residues
MFPELIANPVRSVAVFTGASSGRNHSNAMLAEALGAGLAEQGVRMIYGGGKVGLMGAAADACLANGGCVIGVIPQNLVDG
EIAHAGLSHLEIVDTMYQRKQRMSDLVDAYVCLPGGAGTLDEFFDAWTAQQLGLHRKPIALFGSSFWAPTVSMLKHMADE
GFIRQDDVDTLIVADTVDELLVALNSWAAPCPKWN

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=212, Percent_Identity=33.4905660377358, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20659; Mature: 20659

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPELIANPVRSVAVFTGASSGRNHSNAMLAEALGAGLAEQGVRMIYGGGKVGLMGAAAD
CCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCHHHCCCEEEECCCCEEEHHHHHH
ACLANGGCVIGVIPQNLVDGEIAHAGLSHLEIVDTMYQRKQRMSDLVDAYVCLPGGAGTL
HHHCCCCEEEEECCCCHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DEFFDAWTAQQLGLHRKPIALFGSSFWAPTVSMLKHMADEGFIRQDDVDTLIVADTVDEL
HHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCEEEEHHHHHHH
LVALNSWAAPCPKWN
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MFPELIANPVRSVAVFTGASSGRNHSNAMLAEALGAGLAEQGVRMIYGGGKVGLMGAAAD
CCHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCHHHCCCEEEECCCCEEEHHHHHH
ACLANGGCVIGVIPQNLVDGEIAHAGLSHLEIVDTMYQRKQRMSDLVDAYVCLPGGAGTL
HHHCCCCEEEEECCCCHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DEFFDAWTAQQLGLHRKPIALFGSSFWAPTVSMLKHMADEGFIRQDDVDTLIVADTVDEL
HHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCEEEEHHHHHHH
LVALNSWAAPCPKWN
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]