| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 77761073
Identifier: 77761073
GI number: 77761073
Start: 211775
End: 212791
Strand: Reverse
Name: 77761073
Synonym: XC_0169
Alternate gene names: NA
Gene position: 212791-211775 (Counterclockwise)
Preceding gene: 66766515
Following gene: 66766513
Centisome position: 4.13
GC content: 69.52
Gene sequence:
>1017_bases ATGGCACAGTGGTATTTCCATATTCCCGGACAGGCCGACCGGATCGGCCCGCTTGATGACGCCAGCGCCCGCGCGCATGC GCAGCGCCAGCCCGACGCGCTGGCCTGGCGCGACGGCCTCGACGGCTGGACACCCGCCCGCCAGCTGGCCGAATTGCAGG GCGCCGGCAGCCTGCCGCCGCAGTTGAGCGGCACAGGCGCCGCACGCGCGGACGAGATCGATTACCGCATCGTCGGCAAC GACATGCAGTTCGTCGAGGTCGAACTGGACCCGGGCGAGAGCGCCATCGCCGAAGCCGGTGCGCTGATGTACAAGGACGC CGCGGTGCAGATGGACACCGTGTTCGGCGATGGCTCGCACGATGGCCAGGGCGGCAGCAGCGGCGGGCTGATGGGCAAGT TGCTCTCGGCCGGCAAGCGCGTGGTGACCGGCGAAAGCATGTTCACCACCGTGTTCACGCACGCCGGCAGCGGCAAGGCC AAGGTGGCGTTCGCCGCGCCCTACCCCGGCACCGTGCTGGCGTTGCGGCTGTCCGAACACGGCGGCCGCCTGATCTGCCA GAAGGACAGCTTCCTGGCGGGTGCGCGCGGCGTATCGCTGGGTATCGCCTTCCAGCGCAAGATCCTCACCGGCCTGTTCG GCGGCGAGGGATTCATCATGCAGAAGCTCGAAGGCGACGGCTGGGTGTTCGTGCATGCCGGCGGCACCGTGGTGGAACGC GACCTGGCGCCGGGCGAACGCATCGACGTGGACACCGGCTGCGTGGTCGCCTACCACGCCAGCGTGGACATGGACGTGCG CCGCATCGCCGGCCTGAAGAGCATGTTCTTCGGCGGCGAAGGCGTGTTCCTGGCCACCCTCACCGGCCCGGGCAAGGTGT GGATGCAATCGCTGCCGTTCTCGCGCATGGCCGGCCGCATGCTGCAGGCCGCCCCGCAGGCCGGTGGCCAACAACGCGGC GAAGGGTCGGTGCTGGGTGGACTGGGGCGCTTGCTGGATGGCGACAACCGGTTCTGA
Upstream 100 bases:
>100_bases ACCCCTGCCCAACCGGTGCGCCGCGCCATGACGTTGGGCAGGGGACAGCGGGCCGGCCACTGCGCTTAGACTCGGCGCAC CGCAGACAGGAGTCGTCCCG
Downstream 100 bases:
>100_bases TCGAAGCAGACTGGTTGACCGCGGCTGGTGCGACGCGTTGCCGTAAACGCACCAGCCGCGGTTAACCGAAGCGCTTTACT GCGGCGCTGATGCGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAQWYFHIPGQADRIGPLDDASARAHAQRQPDALAWRDGLDGWTPARQLAELQGAGSLPPQLSGTGAARADEIDYRIVGN DMQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSHDGQGGSSGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKA KVAFAAPYPGTVLALRLSEHGGRLICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVER DLAPGERIDVDTGCVVAYHASVDMDVRRIAGLKSMFFGGEGVFLATLTGPGKVWMQSLPFSRMAGRMLQAAPQAGGQQRG EGSVLGGLGRLLDGDNRF
Sequences:
>Translated_338_residues MAQWYFHIPGQADRIGPLDDASARAHAQRQPDALAWRDGLDGWTPARQLAELQGAGSLPPQLSGTGAARADEIDYRIVGN DMQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSHDGQGGSSGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKA KVAFAAPYPGTVLALRLSEHGGRLICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVER DLAPGERIDVDTGCVVAYHASVDMDVRRIAGLKSMFFGGEGVFLATLTGPGKVWMQSLPFSRMAGRMLQAAPQAGGQQRG EGSVLGGLGRLLDGDNRF >Mature_337_residues AQWYFHIPGQADRIGPLDDASARAHAQRQPDALAWRDGLDGWTPARQLAELQGAGSLPPQLSGTGAARADEIDYRIVGND MQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSHDGQGGSSGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKAK VAFAAPYPGTVLALRLSEHGGRLICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVERD LAPGERIDVDTGCVVAYHASVDMDVRRIAGLKSMFFGGEGVFLATLTGPGKVWMQSLPFSRMAGRMLQAAPQAGGQQRGE GSVLGGLGRLLDGDNRF
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 35513; Mature: 35382
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQWYFHIPGQADRIGPLDDASARAHAQRQPDALAWRDGLDGWTPARQLAELQGAGSLPP CCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEHHCCCCCCCHHHHHHHHCCCCCCCC QLSGTGAARADEIDYRIVGNDMQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSH CCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHHCCEEEECCEEEEEEEECCCCC DGQGGSSGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKAKVAFAAPYPGTVLALRLSEH CCCCCCCCCHHHHHHHCCCEEEECCHHEEEEEEECCCCCEEEEEECCCCCEEEEEEEECC GGRLICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVER CCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCEEEEE DLAPGERIDVDTGCVVAYHASVDMDVRRIAGLKSMFFGGEGVFLATLTGPGKVWMQSLPF CCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHCCCH SRMAGRMLQAAPQAGGQQRGEGSVLGGLGRLLDGDNRF HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure AQWYFHIPGQADRIGPLDDASARAHAQRQPDALAWRDGLDGWTPARQLAELQGAGSLPP CEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEHHCCCCCCCHHHHHHHHCCCCCCCC QLSGTGAARADEIDYRIVGNDMQFVEVELDPGESAIAEAGALMYKDAAVQMDTVFGDGSH CCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHHCCEEEECCEEEEEEEECCCCC DGQGGSSGGLMGKLLSAGKRVVTGESMFTTVFTHAGSGKAKVAFAAPYPGTVLALRLSEH CCCCCCCCCHHHHHHHCCCEEEECCHHEEEEEEECCCCCEEEEEECCCCCEEEEEEEECC GGRLICQKDSFLAGARGVSLGIAFQRKILTGLFGGEGFIMQKLEGDGWVFVHAGGTVVER CCEEEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCEEEEE DLAPGERIDVDTGCVVAYHASVDMDVRRIAGLKSMFFGGEGVFLATLTGPGKVWMQSLPF CCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHCCCH SRMAGRMLQAAPQAGGQQRGEGSVLGGLGRLLDGDNRF HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA