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The map label for this gene is ylbK [H]

Identifier: 66766513

GI number: 66766513

Start: 210389

End: 211426

Strand: Reverse

Name: ylbK [H]

Synonym: XC_0168

Alternate gene names: 66766513

Gene position: 211426-210389 (Counterclockwise)

Preceding gene: 77761073

Following gene: 66766510

Centisome position: 4.11

GC content: 67.73

Gene sequence:

>1038_bases
ATGACTGCGCTCCGTCGCCCACGCTCCCTTGCCTTGCTGTCGCTGATCGGCCTGCTTTCGGCCTGTGGGGGCGAACCGCG
TCCCGCCACGCCCGCGCCGGTGGTGCAGGCGCCGTCTGCCACTGCGCCCAAGCCGGTGAAGATCGGCGTCGCGCTCGGCG
GCGGTGCGGCCAAGGGCTTTGCACATATCGGCGTGATCAAGATGCTGGAAGCCAACGGGTTTGCACCGGTGGTGGTGTCG
GGCACCAGCGCCGGTAGCGTGGTGGGCGCGCTGTACGCCAGCGGCATGGACGCGTTCCAGATGCAGGAAAAGGCCGTGGC
GCTGGACCAGACCAGCATCCGCGACGTGCGCTTGTTCTCCGGTGGCCTGGTGCAGGGGCAGAAGCTGCAGGACTACGTCA
ACGAACAGCTCGGCGGCAAGCCGATCGACAAACTGCGCAAACCATTCGCCGCGGTCGCCACACGGCTGGAAGACGGTGAG
CGCACGGTGTTCGTGCGTGGCAATGCCGGCCAGGCGGTGCGCGCCTCCAGCAGCATTCCCGGCGTGTTCGAGCCGGTGAC
CATCGGCCAGTACCACTACGTGGACGGCGGCGTGGTCAGCCCGGTGCCGGTGGATGCGGCGCGCCAGCTCGGCGCCGAAT
TCGTGGTGGCGGTGGATATTTCCAGCAAGGCCAGCGGCAAGAATCCCGGCGACCTGCTGGGCACGGTCAATCAGTCGATC
TCGATCATGGGCCAGCGCCTGGGCGAGGCCGAACTCAAGCGTGCCGACGTGGTGATCCGCCCCAAGGTCAACGACATCGG
CTCGGCCGATTTCAACCAGCGCGGCGCCGCAATCCTGGAAGGCGAACGCGCGGCAATGGCGGTGATGCCGCAGATCCGCG
CCAAGATCGCGCAACTGCAGGCGCAGCGCAGCAGCGCCACCCGCAGTGCGGCCGAACAGGCCAAGGCGGCAAAGCAGGAG
GCGTACAAGCGCTGCCTGGAAGAACGCTCGCGCTGGCAGAAGTTGCGCGGCAAGGATGAGGAATGCGTGGCGCCCTGA

Upstream 100 bases:

>100_bases
TCCCTGACGCAGCCCGGCTGCCGAGGCGACCAATGGGACGCGCGGCGTTAGGGGGTGCGCGTGTATTCTCCCTCGCCTTT
CCAACTACGTTTCCGTCGCC

Downstream 100 bases:

>100_bases
TGCGCGTGTTGGTGCGGATGTAGATGCGCGTGAGCCGTACGTCGCAGGCCGATCAACGAAGTACGCGCAAGGTTGATGTG
GGCGTTTTTGGCGACAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTALRRPRSLALLSLIGLLSACGGEPRPATPAPVVQAPSATAPKPVKIGVALGGGAAKGFAHIGVIKMLEANGFAPVVVS
GTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFSGGLVQGQKLQDYVNEQLGGKPIDKLRKPFAAVATRLEDGE
RTVFVRGNAGQAVRASSSIPGVFEPVTIGQYHYVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQSI
SIMGQRLGEAELKRADVVIRPKVNDIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQAQRSSATRSAAEQAKAAKQE
AYKRCLEERSRWQKLRGKDEECVAP

Sequences:

>Translated_345_residues
MTALRRPRSLALLSLIGLLSACGGEPRPATPAPVVQAPSATAPKPVKIGVALGGGAAKGFAHIGVIKMLEANGFAPVVVS
GTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFSGGLVQGQKLQDYVNEQLGGKPIDKLRKPFAAVATRLEDGE
RTVFVRGNAGQAVRASSSIPGVFEPVTIGQYHYVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQSI
SIMGQRLGEAELKRADVVIRPKVNDIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQAQRSSATRSAAEQAKAAKQE
AYKRCLEERSRWQKLRGKDEECVAP
>Mature_344_residues
TALRRPRSLALLSLIGLLSACGGEPRPATPAPVVQAPSATAPKPVKIGVALGGGAAKGFAHIGVIKMLEANGFAPVVVSG
TSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFSGGLVQGQKLQDYVNEQLGGKPIDKLRKPFAAVATRLEDGER
TVFVRGNAGQAVRASSSIPGVFEPVTIGQYHYVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQSIS
IMGQRLGEAELKRADVVIRPKVNDIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQAQRSSATRSAAEQAKAAKQEA
YKRCLEERSRWQKLRGKDEECVAP

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=232, Percent_Identity=31.0344827586207, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI260656041, Length=232, Percent_Identity=31.0344827586207, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI116256487, Length=232, Percent_Identity=31.0344827586207, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI260656043, Length=232, Percent_Identity=31.0344827586207, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI260656037, Length=232, Percent_Identity=31.0344827586207, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI148727335, Length=202, Percent_Identity=32.1782178217822, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI148727290, Length=202, Percent_Identity=32.1782178217822, Blast_Score=86, Evalue=4e-17,
Organism=Escherichia coli, GI226510936, Length=302, Percent_Identity=32.7814569536424, Blast_Score=140, Evalue=2e-34,
Organism=Saccharomyces cerevisiae, GI6323581, Length=196, Percent_Identity=30.1020408163265, Blast_Score=83, Evalue=6e-17,
Organism=Drosophila melanogaster, GI281376913, Length=184, Percent_Identity=28.2608695652174, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI28571388, Length=184, Percent_Identity=27.1739130434783, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36133; Mature: 36002

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALRRPRSLALLSLIGLLSACGGEPRPATPAPVVQAPSATAPKPVKIGVALGGGAAKGF
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCHHHH
AHIGVIKMLEANGFAPVVVSGTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFS
HHHHHHHEEECCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEEEC
GGLVQGQKLQDYVNEQLGGKPIDKLRKPFAAVATRLEDGERTVFVRGNAGQAVRASSSIP
CCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
GVFEPVTIGQYHYVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQSI
CCCCCEECCEEEEECCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH
SIMGQRLGEAELKRADVVIRPKVNDIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQ
HHHHHHHCHHHHHHCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHH
AQRSSATRSAAEQAKAAKQEAYKRCLEERSRWQKLRGKDEECVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TALRRPRSLALLSLIGLLSACGGEPRPATPAPVVQAPSATAPKPVKIGVALGGGAAKGF
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCHHHH
AHIGVIKMLEANGFAPVVVSGTSAGSVVGALYASGMDAFQMQEKAVALDQTSIRDVRLFS
HHHHHHHEEECCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHEEEEC
GGLVQGQKLQDYVNEQLGGKPIDKLRKPFAAVATRLEDGERTVFVRGNAGQAVRASSSIP
CCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
GVFEPVTIGQYHYVDGGVVSPVPVDAARQLGAEFVVAVDISSKASGKNPGDLLGTVNQSI
CCCCCEECCEEEEECCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH
SIMGQRLGEAELKRADVVIRPKVNDIGSADFNQRGAAILEGERAAMAVMPQIRAKIAQLQ
HHHHHHHCHHHHHHCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHH
AQRSSATRSAAEQAKAAKQEAYKRCLEERSRWQKLRGKDEECVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]