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The map label for this gene is ftsY [H]

Identifier: 66768019

GI number: 66768019

Start: 2034649

End: 2036289

Strand: Reverse

Name: ftsY [H]

Synonym: XC_1695

Alternate gene names: 66768019

Gene position: 2036289-2034649 (Counterclockwise)

Preceding gene: 66768020

Following gene: 66768018

Centisome position: 39.55

GC content: 70.44

Gene sequence:

>1641_bases
ATGGTAGAATTCCGCGTTTCCCCTACTGCGTTGCCAATGGCCAGCTTCTTCCGTCGCAACAAGCCAACCACGCCCGACAG
CTCGCGGACCTCGCGCTACAGCCTGGAAGAACTGGCAGCCGCATTCCCCACGGCGCCATCGGCTGCCACGCCAGCCGCTC
CGCCCGCGCCCACCCAGACACCGCCTGCCAGCGCGCCGACCACACCGGTCGCGCCGGTTGCAGCGCCCAGCACGCCGGCT
GCAGAAACGCCAACGCCAACAGCGCCGGCCGCACCCGCTGAACAACTGGCGCAGGACATCGCCGCACGCACCGGGCAGGC
GCAGAGCATTGCCGCGGTGCCCAGCGCCCCCACGCCGGCGCCAGCCGCTGCGCCCTCGGCGCTGCAGGCATTGCCGGATC
CGGTTGCGCCGAGCGCGCCTGCCACCGCCACGCCCGTCGTTGTGGTGCCTACGCCACAGCCCCTGCCACAGGCCGCACCT
GCTGCACCGCTGCAAGCGCCGACCCCGGCAGTCACGCCAGCCGCGCAAGTAGCCACGCCGCAGGTGGCGGTACCGCCCGT
GGTGCCTGCACCGGCCGCGCCTGCGGTGCCCGCAGCGACACCGCCCGCCGCATACGCGCCAGCTCCGGCAGCGCCCGTGG
TCACCACACCGGTGGCTGCGCCCACGCACCTCGTGCAGGACAGCGGCATCGACACCCACGACAGCCTGCCTGCCGCGCCG
GCCGGCAAGCCGGGCTGGCGCGAGCGCCTGCGCAACAGCACCTTTGCGCGCAGCTTTGGCGGCCTGTTCTCCCGTAACCC
CAAGCTCGACGACGACCTGCTCGACGAGATCGAGACCGCGTTGATCACCGCCGACGTCGGCATCGGCGCCACCACCGCGC
TGGTCGAAGGCCTGCGCAAGCGCATGAAGTCGCGCGAGTTCGTCGATGCCCAGGCCATGTTCAAGGCCTTTCGCGCCGAC
CTCATCGCACTGCTGCAGCCGGTCTCCAAACCGCTGGTGATCGACCGCTCGGTCAAGCCGTTCGTGGTGCTGACCGTCGG
CGTCAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTCGCCAAGCGCTTCAAGGACGACGGCCACAGCCTGATGCTGG
CCGCCGGCGACACCTTCCGTGCCGCCGCGGTGGCCCAGCTGCAGGCCTGGGGCGATCGCAATGGCGTGGCCGTGATTGCG
CAGGGACAGAACGCCGATGCCGCTTCGGTGGCGTTCGACGCACTGCAGGCCGCCAAGGCCCGTGGCACCGAGGTGCTGAT
TGCCGATACCGCTGGCCGCCTGCACACGCAGACCGGGCTGATGAACGAGCTGGGCAAAATCCGCCGCGTGCTCGGCAAGA
TCGATGCCGCCGCGCCGCACGAAGTGCTGATGGTCATCGACGGCACCACCGGCCAGAACGCCATCTCGCAGCTGCGCCAG
TTCCACGCGGCCGTCGGCGTCACCGGCCTGGTGGTGACCAAGCTCGATGGCACCGCCAAGGGCGGCGTGGTATTTGCGCT
GGCCCGCGAGTTCGGCATTCCAATCCGCTTCGCCGGCATCGGCGAGCGCCCGGAAGACCTGCGCGTGTTCGACCCGGAAG
CGTTTGTCGATGCGCTGCTGCCAGAAGCGCTGGGCAGCTGA

Upstream 100 bases:

>100_bases
GTATGCCGCAGATGCAGAATTCGGCAGGATTGCAGCCGGGCCGCGAGGCCCGTGGCGCTGGCTGCGCTGAAGGACGCGTC
AAGGGCCGAACCGGGCCCGG

Downstream 100 bases:

>100_bases
TTCCACGCCTGCTGCAGTGCTGCACGCATGCAGCACTGGCGCTGGGGTCCAGATGGCTGCGCGGATGCATTCACCGCGCT
GCGTCTGCACTGGCCAGGCA

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MVEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPAAPPAPTQTPPASAPTTPVAPVAAPSTPA
AETPTPTAPAAPAEQLAQDIAARTGQAQSIAAVPSAPTPAPAAAPSALQALPDPVAPSAPATATPVVVVPTPQPLPQAAP
AAPLQAPTPAVTPAAQVATPQVAVPPVVPAPAAPAVPAATPPAAYAPAPAAPVVTTPVAAPTHLVQDSGIDTHDSLPAAP
AGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATTALVEGLRKRMKSREFVDAQAMFKAFRAD
LIALLQPVSKPLVIDRSVKPFVVLTVGVNGVGKTTTIGKLAKRFKDDGHSLMLAAGDTFRAAAVAQLQAWGDRNGVAVIA
QGQNADAASVAFDALQAAKARGTEVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQNAISQLRQ
FHAAVGVTGLVVTKLDGTAKGGVVFALAREFGIPIRFAGIGERPEDLRVFDPEAFVDALLPEALGS

Sequences:

>Translated_546_residues
MVEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPAAPPAPTQTPPASAPTTPVAPVAAPSTPA
AETPTPTAPAAPAEQLAQDIAARTGQAQSIAAVPSAPTPAPAAAPSALQALPDPVAPSAPATATPVVVVPTPQPLPQAAP
AAPLQAPTPAVTPAAQVATPQVAVPPVVPAPAAPAVPAATPPAAYAPAPAAPVVTTPVAAPTHLVQDSGIDTHDSLPAAP
AGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATTALVEGLRKRMKSREFVDAQAMFKAFRAD
LIALLQPVSKPLVIDRSVKPFVVLTVGVNGVGKTTTIGKLAKRFKDDGHSLMLAAGDTFRAAAVAQLQAWGDRNGVAVIA
QGQNADAASVAFDALQAAKARGTEVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQNAISQLRQ
FHAAVGVTGLVVTKLDGTAKGGVVFALAREFGIPIRFAGIGERPEDLRVFDPEAFVDALLPEALGS
>Mature_546_residues
MVEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPAAPPAPTQTPPASAPTTPVAPVAAPSTPA
AETPTPTAPAAPAEQLAQDIAARTGQAQSIAAVPSAPTPAPAAAPSALQALPDPVAPSAPATATPVVVVPTPQPLPQAAP
AAPLQAPTPAVTPAAQVATPQVAVPPVVPAPAAPAVPAATPPAAYAPAPAAPVVTTPVAAPTHLVQDSGIDTHDSLPAAP
AGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATTALVEGLRKRMKSREFVDAQAMFKAFRAD
LIALLQPVSKPLVIDRSVKPFVVLTVGVNGVGKTTTIGKLAKRFKDDGHSLMLAAGDTFRAAAVAQLQAWGDRNGVAVIA
QGQNADAASVAFDALQAAKARGTEVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQNAISQLRQ
FHAAVGVTGLVVTKLDGTAKGGVVFALAREFGIPIRFAGIGERPEDLRVFDPEAFVDALLPEALGS

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=305, Percent_Identity=29.8360655737705, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI23308697, Length=305, Percent_Identity=29.8360655737705, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI4507215, Length=285, Percent_Identity=31.2280701754386, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI226371618, Length=202, Percent_Identity=32.1782178217822, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=31.1111111111111, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI1789874, Length=304, Percent_Identity=53.6184210526316, Blast_Score=318, Evalue=8e-88,
Organism=Escherichia coli, GI1788963, Length=275, Percent_Identity=32.7272727272727, Blast_Score=126, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17539958, Length=274, Percent_Identity=30.2919708029197, Blast_Score=115, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI193206261, Length=255, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=284, Percent_Identity=29.9295774647887, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6320498, Length=231, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI17647949, Length=279, Percent_Identity=31.8996415770609, Blast_Score=109, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24641198, Length=251, Percent_Identity=30.2788844621514, Blast_Score=103, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 55718; Mature: 55718

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPAAPPAPTQT
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PPASAPTTPVAPVAAPSTPAAETPTPTAPAAPAEQLAQDIAARTGQAQSIAAVPSAPTPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC
PAAAPSALQALPDPVAPSAPATATPVVVVPTPQPLPQAAPAAPLQAPTPAVTPAAQVATP
CCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
QVAVPPVVPAPAAPAVPAATPPAAYAPAPAAPVVTTPVAAPTHLVQDSGIDTHDSLPAAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCC
AGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATTALVEGLRK
CCCCHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RMKSREFVDAQAMFKAFRADLIALLQPVSKPLVIDRSVKPFVVLTVGVNGVGKTTTIGKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHH
AKRFKDDGHSLMLAAGDTFRAAAVAQLQAWGDRNGVAVIAQGQNADAASVAFDALQAAKA
HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC
RGTEVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQNAISQLRQ
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH
FHAAVGVTGLVVTKLDGTAKGGVVFALAREFGIPIRFAGIGERPEDLRVFDPEAFVDALL
HHHHHCCCEEEEEECCCCCCCCEEEEEHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHH
PEALGS
HHHHCC
>Mature Secondary Structure
MVEFRVSPTALPMASFFRRNKPTTPDSSRTSRYSLEELAAAFPTAPSAATPAAPPAPTQT
CEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PPASAPTTPVAPVAAPSTPAAETPTPTAPAAPAEQLAQDIAARTGQAQSIAAVPSAPTPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCC
PAAAPSALQALPDPVAPSAPATATPVVVVPTPQPLPQAAPAAPLQAPTPAVTPAAQVATP
CCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
QVAVPPVVPAPAAPAVPAATPPAAYAPAPAAPVVTTPVAAPTHLVQDSGIDTHDSLPAAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCC
AGKPGWRERLRNSTFARSFGGLFSRNPKLDDDLLDEIETALITADVGIGATTALVEGLRK
CCCCHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RMKSREFVDAQAMFKAFRADLIALLQPVSKPLVIDRSVKPFVVLTVGVNGVGKTTTIGKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHH
AKRFKDDGHSLMLAAGDTFRAAAVAQLQAWGDRNGVAVIAQGQNADAASVAFDALQAAKA
HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC
RGTEVLIADTAGRLHTQTGLMNELGKIRRVLGKIDAAAPHEVLMVIDGTTGQNAISQLRQ
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH
FHAAVGVTGLVVTKLDGTAKGGVVFALAREFGIPIRFAGIGERPEDLRVFDPEAFVDALL
HHHHHCCCEEEEEECCCCCCCCEEEEEHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHH
PEALGS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]