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The map label for this gene is ycfJ [C]

Identifier: 66767696

GI number: 66767696

Start: 1653559

End: 1654131

Strand: Direct

Name: ycfJ [C]

Synonym: XC_1369

Alternate gene names: 66767696

Gene position: 1653559-1654131 (Clockwise)

Preceding gene: 66767695

Following gene: 66767699

Centisome position: 32.12

GC content: 67.19

Gene sequence:

>573_bases
ATGGGTCTGGCTGTTGCGGGCAACGCGACGGCGCAGCGGTACGACAACGGCTACCGCGACAATGGCCGCGGCGGCTACGA
GGATGGGCGCTACGAATACGCCCGCGTGGTGCGCGTGGATCCGATCATCGTCTCGGACGCATACACAGAGCGCACCAGCG
AGCGCTGCTACAACCGCACCTCCGACGGGTACTACACCAGCAACGACGGCTACTACCGCAATGACGGTGGTTATGGCGGG
GCCAATCCTTCCAACCGTGGGGTTGCCAGCGTGATCGGCGGCATCGCCGGTGCGGTGCTGGGCAGCCAGGTCGGTGGCGG
CAATGGGCGCCTGGTCGGCACCGCGGTCGGCACCATGGCCGGCGTTGCCGCGGGGCGCTCGATCTACGAAGCCAATCACC
GCTCCTACCAGGGCAATGTCAGCGTCTGCGAGCCGGTGTCCTACCGCCGTGAGCGCGACCGTGTCGACGGCTATGACGTG
ACCTACGAATACGGCGGCCGGATGTACCACACCCGCAGCGACTACAACCCCGGTGACCGCATCCGCGTGCGCGTGGATGT
GCGCCCCGACTGA

Upstream 100 bases:

>100_bases
TTCGGTTCAGGGCGGTTTCACTGCAGCAAGCCGAGGATCGGCAGCGTGTCCTCCCTGTGAAGCTGCCGCAATGAAAACTC
TTCTGCTTGGTGCGCTGGTG

Downstream 100 bases:

>100_bases
GTGTCGATGGTGGGCGCTGCATCCGGAGTGCGGATGCAGCGGCGGGTGCATGGCACGTGCGGGTCGTGCAGATGTTTTGG
AGTGGTGCCTAGAACAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGLAVAGNATAQRYDNGYRDNGRGGYEDGRYEYARVVRVDPIIVSDAYTERTSERCYNRTSDGYYTSNDGYYRNDGGYGG
ANPSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMAGVAAGRSIYEANHRSYQGNVSVCEPVSYRRERDRVDGYDV
TYEYGGRMYHTRSDYNPGDRIRVRVDVRPD

Sequences:

>Translated_190_residues
MGLAVAGNATAQRYDNGYRDNGRGGYEDGRYEYARVVRVDPIIVSDAYTERTSERCYNRTSDGYYTSNDGYYRNDGGYGG
ANPSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMAGVAAGRSIYEANHRSYQGNVSVCEPVSYRRERDRVDGYDV
TYEYGGRMYHTRSDYNPGDRIRVRVDVRPD
>Mature_189_residues
GLAVAGNATAQRYDNGYRDNGRGGYEDGRYEYARVVRVDPIIVSDAYTERTSERCYNRTSDGYYTSNDGYYRNDGGYGGA
NPSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMAGVAAGRSIYEANHRSYQGNVSVCEPVSYRRERDRVDGYDVT
YEYGGRMYHTRSDYNPGDRIRVRVDVRPD

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20694; Mature: 20562

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLAVAGNATAQRYDNGYRDNGRGGYEDGRYEYARVVRVDPIIVSDAYTERTSERCYNRT
CCEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECEEEEECCHHHHHHHHHHCCC
SDGYYTSNDGYYRNDGGYGGANPSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMA
CCCEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHH
GVAAGRSIYEANHRSYQGNVSVCEPVSYRRERDRVDGYDVTYEYGGRMYHTRSDYNPGDR
HHHHCCHHHHCCCCCCCCCCEEECCHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCE
IRVRVDVRPD
EEEEEEECCC
>Mature Secondary Structure 
GLAVAGNATAQRYDNGYRDNGRGGYEDGRYEYARVVRVDPIIVSDAYTERTSERCYNRT
CEEECCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECEEEEECCHHHHHHHHHHCCC
SDGYYTSNDGYYRNDGGYGGANPSNRGVASVIGGIAGAVLGSQVGGGNGRLVGTAVGTMA
CCCEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHH
GVAAGRSIYEANHRSYQGNVSVCEPVSYRRERDRVDGYDVTYEYGGRMYHTRSDYNPGDR
HHHHCCHHHHCCCCCCCCCCEEECCHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCE
IRVRVDVRPD
EEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA