| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is osmC [H]
Identifier: 66767695
GI number: 66767695
Start: 1652942
End: 1653376
Strand: Direct
Name: osmC [H]
Synonym: XC_1368
Alternate gene names: 66767695
Gene position: 1652942-1653376 (Clockwise)
Preceding gene: 66767694
Following gene: 66767696
Centisome position: 32.1
GC content: 62.76
Gene sequence:
>435_bases ATGGGCATTTCGCGTCACGCCACCGCACACTGGGAAGGCGACCTCAAGACCGGCAAGGGCCAGCTCAGCACTCCGCAGAG CGGGTTGATGGAGAACACCCGGTATGCCTTCAGCAGCCGCTTCGGCGACGAAAAGGGCACCAACCCCGAAGAGTTGATCG CTGCCGCGCATGCCGGCTGCTTCACCATGGCACTGTCCGCGCAGTTGACCGAAGCCGGCTTTCCGCCGACCTCGCTCGAT ACTCGCGCCGATGTCGATCTGTCGATGGAAGGTGGCCCACAGCTGTCGCAGATCCGGTTGAAGCTCAAGGCCATGGTGCC GGGCATCGATGAAGCCAAGTTCCGCGAGCTGGCCGACACCGCCAAGAAGAATTGCCCGGTGTCCAAGGCGCTGAGCGCTG TGCCGATCAGCCTGGAAACCGAGTTTTCCAGCTGA
Upstream 100 bases:
>100_bases CAATTCCCAATTCCCAATTCCCAATTCCCAATTCCACCTCTCAACGCCATAACACCCGCTCGCCTAAGGTAACGGTCCCT TTCAATCGCAGGAGACCGCA
Downstream 100 bases:
>100_bases CCGCGGCGCTGGCTGCGTACATCGGCGCAAGGCGTCGATGTACGCAGCTGGCGGCTTGCTGAATAGGGCTTTGAGCAGGC CGTTCGGTTCAGGGCGGTTT
Product: osmotically inducible protein
Products: NA
Alternate protein names: Osmotically-inducible protein C [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MGISRHATAHWEGDLKTGKGQLSTPQSGLMENTRYAFSSRFGDEKGTNPEELIAAAHAGCFTMALSAQLTEAGFPPTSLD TRADVDLSMEGGPQLSQIRLKLKAMVPGIDEAKFRELADTAKKNCPVSKALSAVPISLETEFSS
Sequences:
>Translated_144_residues MGISRHATAHWEGDLKTGKGQLSTPQSGLMENTRYAFSSRFGDEKGTNPEELIAAAHAGCFTMALSAQLTEAGFPPTSLD TRADVDLSMEGGPQLSQIRLKLKAMVPGIDEAKFRELADTAKKNCPVSKALSAVPISLETEFSS >Mature_143_residues GISRHATAHWEGDLKTGKGQLSTPQSGLMENTRYAFSSRFGDEKGTNPEELIAAAHAGCFTMALSAQLTEAGFPPTSLDT RADVDLSMEGGPQLSQIRLKLKAMVPGIDEAKFRELADTAKKNCPVSKALSAVPISLETEFSS
Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
Organism=Escherichia coli, GI1787757, Length=145, Percent_Identity=51.7241379310345, Blast_Score=143, Evalue=4e-36,
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 - InterPro: IPR019904 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 15372; Mature: 15240
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGISRHATAHWEGDLKTGKGQLSTPQSGLMENTRYAFSSRFGDEKGTNPEELIAAAHAGC CCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCH FTMALSAQLTEAGFPPTSLDTRADVDLSMEGGPQLSQIRLKLKAMVPGIDEAKFRELADT HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AKKNCPVSKALSAVPISLETEFSS HHHCCCHHHHHHHCCCEEECCCCC >Mature Secondary Structure GISRHATAHWEGDLKTGKGQLSTPQSGLMENTRYAFSSRFGDEKGTNPEELIAAAHAGC CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCH FTMALSAQLTEAGFPPTSLDTRADVDLSMEGGPQLSQIRLKLKAMVPGIDEAKFRELADT HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH AKKNCPVSKALSAVPISLETEFSS HHHCCCHHHHHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]