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The map label for this gene is cirA [C]

Identifier: 66767549

GI number: 66767549

Start: 1493705

End: 1496446

Strand: Reverse

Name: cirA [C]

Synonym: XC_1222

Alternate gene names: 66767549

Gene position: 1496446-1493705 (Counterclockwise)

Preceding gene: 66767551

Following gene: 66767548

Centisome position: 29.06

GC content: 60.5

Gene sequence:

>2742_bases
ATGCACAGCCGCACCACGACGTTAGCATTCTGTATTACCGCCGCCCTGTACTACTCCGGCGCTGCCATGGCTGCCGGACA
AGAACAGCAAGCCGCTCCGCAAGCTGCTCCAAACGCGCCCTCGTCCACCACCGAGCTGGACACGATCACCGTCACCGGCT
ACCGCGCTTCGCTGGAGAAGAGCCAGGCGGTCAAGCGCTCGGCCAACTCGATCGTCGACGCCATCAGCGCCGAAGACATC
GGCAAGTTCCCGGACATCAATGCGGCAGAATCGCTCTCGCATCTGCCGGGCATCAGCGTCGACCGCCAGTTCGGCGAAGG
CGAAAAGGTCAGCATCAACGGCACCGACCCGGCATTGAACCGCGTGCTGCTCAATGGCCAGACCATCGCCTCCGGCGACT
GGGGCGGCAACCCGACCGACACCAGCGGCCGTACCTTCAACTACACGCTGCTGTCGCCGGAAATCATCGGCCTGATGGAG
GTCTACAAGACCCCCGAGGCGCGCATCGACGAAGGCTCGATCGGCGGCACCGTGATCGTGCACACCCGCAAGCCGCTGGA
CCTGCCCAAGAACACCATCCGCGGCTCGATCGGCTACAACTACAACGATCGCTCGGAAGAAGGTAACCCGCGCGGCTCGG
CGTTGTGGAGCTGGAAGAACGACGACGAAACCTTCGGCGCGTTGATCTCCGCCACGCACGACAAGCAGGACCTGGCACGC
GCCGGTATCGAATACTTCGGCTACACCACCGGTGCCAACATCCCCGCCAGCGCCACCATCACCGGCGACGGCAGCGATGT
GGCCACCGCCCGCGTGCCGGCCGGCATCAGCAGTGCATTCTTCCAGCAGACCCGCGAGCGCAGCGGCCTGCAGGGTGCAT
TGCAGTGGAAGCCCAACGAGCAGAACGAGTTCAACCTGACCGGTCTGTACATCAAGGGCAAGTACAACAACTTCAGCCAG
GCGCGCTATGTCTGCCCGAACTGTTCTTCTCCGGCAGCCGATGGGTCGCTGGACGCGAACGGAAACCAGGTCCAGATCAA
CAATATGCGTCTGATCGATAGGGCGACAGTACAGGATGGCGTGGTCACGTCTGCAAATTTCGCCGATAACGGTCTTGCCC
AACCCTATTCGCAGCTGGACACGATCTATCGCGAAAGTACTGTTACCACCAAAAGCCTGAACCTGCGTCACGACTGGTCG
GGCGAAAAGTGGGTCTTCACCACGCAGGGTGGTTACACCGAGGCGACGGGTGGCAAGAACCCCGAATACCTGATGAAGTA
CCTGATGCAGGATGGCGGCTATAACTACGCCTTTGATGGCCGCAACACTGCGGTCAATTATGAGAATGGTGGCGCGGCCA
ACTGGGTGTTACCGGGCAATCCGGCAGGCCTGGCACCAGGTCAGGTGGGTAATGTTCCCGGTACAGGGACGCCTATCATG
CAGGCCGGCGGTATCGCCTACCAGAAGAGCAAGGACGACGAAAAGTACTTCCAGTGGGACGCCTCGCGCGACCTGGAATG
GGGCCCGTTCACCAAGCTGCAGTTCGGCTACAAGTACATCAACCACAACAATGGCGTAGAGGCACGCGGCAATCGCATCA
ACTCCACCGACGCAGTGTCGTTGACGCAGTTCAATCCCGGCAGAACGCCCAGCAGCCTGTACGACGGTTTGGGTGCCAGT
GGCGATCTCACCAACTGGTCGACCGCGAGTCTGGATTCGGTGCGCAACTATCTATTGTCGCAGCCGCAGGGTCCGTACCT
CACCGACTTCGGCGCCTCGTTCCAGGTCAAGGAAATCACCCAGAACGTCTACACGCAGTTGAACTTCGAATCCGGCCAGT
GGCGCGGTAACGTCGGCGTGCGCCTGGTCGACACAACCAATAAATCCGAGTTCTGGCAGAGCAACGACGGCGGCGCCAAC
TTCGACCGTGTGGCCGAAACCAACGATTACCGCAAAGCACTGCCAAGCTTCAATATCGCCTATGACGTTACCGACGATGC
CGTGCTGCGCTTCTCGGCGGCCAAGGTGATTGCACGTCCGCGTTATGCCGACCTGGCGGGCACGTTCACCATCAACAGCG
GTACCGGTGACCTGACTGCCAACGGCGGCAACCCGGATCTGAAGCCGTACGAATCCACCAACTACGATCTGGCGGCCGAG
TGGTATTTCGCCCCGTCCAGCATGTTGTCCGGTGAAGTGTTCTATCGCGACATCAGCTCCTACATCGTAAGCACTACCAC
CACGCAGCCGTTGAATCCGGCACCGCCGGCCCGGCCGGGCGATTACCAGGTCACCACGCCGGTCAACGTGTCGGACGCCA
AGGTCACCGGCGTGTCGGTCAACTACCAGCAGACCTTCGGTCTGGGTTTTGGCTTGCAGGCCAACTACACCTTTGCCGAA
TCCGATTCCAGCTCCGGCTTGAACCTGCCGTACCTGTCGCGCGATACCTACAACGTGATTCCGTACTGGGAACACGGCGA
CTGGACGGTGCGCGTGAACTACAGCTACCGCTCGAAGTACTTCACCCAGATCGGTCGCCTGCAGTCGCGTGACTTTGCAG
ATGCCTACAAGCAGCTGGATTTGAACGCCTCGTATCAGATCACCGATTACATGGGCATCACCTTCGGCGCGACCAACCTG
CTGGATTCCACCTACCGGGTCTTCAGCAACACGCGTGATACCCCGACCGCGTTCTACAAGAACGGCCGCGGCTACCAGGC
ACAGCTCAACTTCAAGTTCTGA

Upstream 100 bases:

>100_bases
CGCGATCGGTCAGGGCGTGTTGTTTTGCCGGCCACGCCGAGCGCGTTGCGCCTCACCACGGGCCATCCGCGCTCAAAGCA
CTAACCAACGAGGTTTAGCC

Downstream 100 bases:

>100_bases
TGGTGTGACGGCGCGCCACCGACCCTCCACGGTGGCGCGCCTTTTTTTCTGTCGTTGCATGGGGCAACGACAGTGCATGC
AGTGCACATTGAGTGGACCT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor Subfamily Protein; Outer Membrane Protein; NB-Dependent Outer Membrane Receptor Protein; NB-Dependent Receptor-Like Protein; Outer Membrane Insertion C-Terminal Signal; Nucleoside Diphosphate Kinase; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Fe Receptor Protein; NB Dependent Receptor For Iron Chelates; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; NB-Dependent Receptor Protein; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 3-Dehydroquinate Synthase; Ferrienterochelin/Colicin Outer Membrane Receptor; Peptidase; Outer Membrane Receptor Family Protein; 1-(5-Phosphoribosyl)-5-; Rhodanese-Like Protein; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein

Number of amino acids: Translated: 913; Mature: 913

Protein sequence:

>913_residues
MHSRTTTLAFCITAALYYSGAAMAAGQEQQAAPQAAPNAPSSTTELDTITVTGYRASLEKSQAVKRSANSIVDAISAEDI
GKFPDINAAESLSHLPGISVDRQFGEGEKVSINGTDPALNRVLLNGQTIASGDWGGNPTDTSGRTFNYTLLSPEIIGLME
VYKTPEARIDEGSIGGTVIVHTRKPLDLPKNTIRGSIGYNYNDRSEEGNPRGSALWSWKNDDETFGALISATHDKQDLAR
AGIEYFGYTTGANIPASATITGDGSDVATARVPAGISSAFFQQTRERSGLQGALQWKPNEQNEFNLTGLYIKGKYNNFSQ
ARYVCPNCSSPAADGSLDANGNQVQINNMRLIDRATVQDGVVTSANFADNGLAQPYSQLDTIYRESTVTTKSLNLRHDWS
GEKWVFTTQGGYTEATGGKNPEYLMKYLMQDGGYNYAFDGRNTAVNYENGGAANWVLPGNPAGLAPGQVGNVPGTGTPIM
QAGGIAYQKSKDDEKYFQWDASRDLEWGPFTKLQFGYKYINHNNGVEARGNRINSTDAVSLTQFNPGRTPSSLYDGLGAS
GDLTNWSTASLDSVRNYLLSQPQGPYLTDFGASFQVKEITQNVYTQLNFESGQWRGNVGVRLVDTTNKSEFWQSNDGGAN
FDRVAETNDYRKALPSFNIAYDVTDDAVLRFSAAKVIARPRYADLAGTFTINSGTGDLTANGGNPDLKPYESTNYDLAAE
WYFAPSSMLSGEVFYRDISSYIVSTTTTQPLNPAPPARPGDYQVTTPVNVSDAKVTGVSVNYQQTFGLGFGLQANYTFAE
SDSSSGLNLPYLSRDTYNVIPYWEHGDWTVRVNYSYRSKYFTQIGRLQSRDFADAYKQLDLNASYQITDYMGITFGATNL
LDSTYRVFSNTRDTPTAFYKNGRGYQAQLNFKF

Sequences:

>Translated_913_residues
MHSRTTTLAFCITAALYYSGAAMAAGQEQQAAPQAAPNAPSSTTELDTITVTGYRASLEKSQAVKRSANSIVDAISAEDI
GKFPDINAAESLSHLPGISVDRQFGEGEKVSINGTDPALNRVLLNGQTIASGDWGGNPTDTSGRTFNYTLLSPEIIGLME
VYKTPEARIDEGSIGGTVIVHTRKPLDLPKNTIRGSIGYNYNDRSEEGNPRGSALWSWKNDDETFGALISATHDKQDLAR
AGIEYFGYTTGANIPASATITGDGSDVATARVPAGISSAFFQQTRERSGLQGALQWKPNEQNEFNLTGLYIKGKYNNFSQ
ARYVCPNCSSPAADGSLDANGNQVQINNMRLIDRATVQDGVVTSANFADNGLAQPYSQLDTIYRESTVTTKSLNLRHDWS
GEKWVFTTQGGYTEATGGKNPEYLMKYLMQDGGYNYAFDGRNTAVNYENGGAANWVLPGNPAGLAPGQVGNVPGTGTPIM
QAGGIAYQKSKDDEKYFQWDASRDLEWGPFTKLQFGYKYINHNNGVEARGNRINSTDAVSLTQFNPGRTPSSLYDGLGAS
GDLTNWSTASLDSVRNYLLSQPQGPYLTDFGASFQVKEITQNVYTQLNFESGQWRGNVGVRLVDTTNKSEFWQSNDGGAN
FDRVAETNDYRKALPSFNIAYDVTDDAVLRFSAAKVIARPRYADLAGTFTINSGTGDLTANGGNPDLKPYESTNYDLAAE
WYFAPSSMLSGEVFYRDISSYIVSTTTTQPLNPAPPARPGDYQVTTPVNVSDAKVTGVSVNYQQTFGLGFGLQANYTFAE
SDSSSGLNLPYLSRDTYNVIPYWEHGDWTVRVNYSYRSKYFTQIGRLQSRDFADAYKQLDLNASYQITDYMGITFGATNL
LDSTYRVFSNTRDTPTAFYKNGRGYQAQLNFKF
>Mature_913_residues
MHSRTTTLAFCITAALYYSGAAMAAGQEQQAAPQAAPNAPSSTTELDTITVTGYRASLEKSQAVKRSANSIVDAISAEDI
GKFPDINAAESLSHLPGISVDRQFGEGEKVSINGTDPALNRVLLNGQTIASGDWGGNPTDTSGRTFNYTLLSPEIIGLME
VYKTPEARIDEGSIGGTVIVHTRKPLDLPKNTIRGSIGYNYNDRSEEGNPRGSALWSWKNDDETFGALISATHDKQDLAR
AGIEYFGYTTGANIPASATITGDGSDVATARVPAGISSAFFQQTRERSGLQGALQWKPNEQNEFNLTGLYIKGKYNNFSQ
ARYVCPNCSSPAADGSLDANGNQVQINNMRLIDRATVQDGVVTSANFADNGLAQPYSQLDTIYRESTVTTKSLNLRHDWS
GEKWVFTTQGGYTEATGGKNPEYLMKYLMQDGGYNYAFDGRNTAVNYENGGAANWVLPGNPAGLAPGQVGNVPGTGTPIM
QAGGIAYQKSKDDEKYFQWDASRDLEWGPFTKLQFGYKYINHNNGVEARGNRINSTDAVSLTQFNPGRTPSSLYDGLGAS
GDLTNWSTASLDSVRNYLLSQPQGPYLTDFGASFQVKEITQNVYTQLNFESGQWRGNVGVRLVDTTNKSEFWQSNDGGAN
FDRVAETNDYRKALPSFNIAYDVTDDAVLRFSAAKVIARPRYADLAGTFTINSGTGDLTANGGNPDLKPYESTNYDLAAE
WYFAPSSMLSGEVFYRDISSYIVSTTTTQPLNPAPPARPGDYQVTTPVNVSDAKVTGVSVNYQQTFGLGFGLQANYTFAE
SDSSSGLNLPYLSRDTYNVIPYWEHGDWTVRVNYSYRSKYFTQIGRLQSRDFADAYKQLDLNASYQITDYMGITFGATNL
LDSTYRVFSNTRDTPTAFYKNGRGYQAQLNFKF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99682; Mature: 99682

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSRTTTLAFCITAALYYSGAAMAAGQEQQAAPQAAPNAPSSTTELDTITVTGYRASLEK
CCCCHHHHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHH
SQAVKRSANSIVDAISAEDIGKFPDINAAESLSHLPGISVDRQFGEGEKVSINGTDPALN
HHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHH
RVLLNGQTIASGDWGGNPTDTSGRTFNYTLLSPEIIGLMEVYKTPEARIDEGSIGGTVIV
EEEECCCEEECCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCEEEE
HTRKPLDLPKNTIRGSIGYNYNDRSEEGNPRGSALWSWKNDDETFGALISATHDKQDLAR
EECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHEECCCCHHHHHH
AGIEYFGYTTGANIPASATITGDGSDVATARVPAGISSAFFQQTRERSGLQGALQWKPNE
HCHHHEEEECCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC
QNEFNLTGLYIKGKYNNFSQARYVCPNCSSPAADGSLDANGNQVQINNMRLIDRATVQDG
CCCEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEECHHCCC
VVTSANFADNGLAQPYSQLDTIYRESTVTTKSLNLRHDWSGEKWVFTTQGGYTEATGGKN
CEEECCCCCCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEEECCCEEECCCCCC
PEYLMKYLMQDGGYNYAFDGRNTAVNYENGGAANWVLPGNPAGLAPGQVGNVPGTGTPIM
HHHHHHHHHHCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
QAGGIAYQKSKDDEKYFQWDASRDLEWGPFTKLQFGYKYINHNNGVEARGNRINSTDAVS
HCCCEEEECCCCCCHHEEECCCCCCCCCCCCEEEECEEEEECCCCCCCCCCCCCCCCCEE
LTQFNPGRTPSSLYDGLGASGDLTNWSTASLDSVRNYLLSQPQGPYLTDFGASFQVKEIT
EEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCEEHHHHH
QNVYTQLNFESGQWRGNVGVRLVDTTNKSEFWQSNDGGANFDRVAETNDYRKALPSFNIA
HHHHHEEECCCCCEECCCCEEEEECCCCHHCCCCCCCCCCHHHHCCCCHHHHHCCCCEEE
YDVTDDAVLRFSAAKVIARPRYADLAGTFTINSGTGDLTANGGNPDLKPYESTNYDLAAE
EECCCCHHEEEHHHHHHCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEE
WYFAPSSMLSGEVFYRDISSYIVSTTTTQPLNPAPPARPGDYQVTTPVNVSDAKVTGVSV
EEECCHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEE
NYQQTFGLGFGLQANYTFAESDSSSGLNLPYLSRDTYNVIPYWEHGDWTVRVNYSYRSKY
ECHHHCCCCCCCCCCEEEECCCCCCCCCCCEECCCCEEEEEEEECCCEEEEEEEHHHHHH
FTQIGRLQSRDFADAYKQLDLNASYQITDYMGITFGATNLLDSTYRVFSNTRDTPTAFYK
HHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHC
NGRGYQAQLNFKF
CCCCEEEEEEECC
>Mature Secondary Structure
MHSRTTTLAFCITAALYYSGAAMAAGQEQQAAPQAAPNAPSSTTELDTITVTGYRASLEK
CCCCHHHHHHHHHHHHHHCCCHHCCCCHHHCCCCCCCCCCCCCCEEEEEEEECCHHHHHH
SQAVKRSANSIVDAISAEDIGKFPDINAAESLSHLPGISVDRQFGEGEKVSINGTDPALN
HHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHH
RVLLNGQTIASGDWGGNPTDTSGRTFNYTLLSPEIIGLMEVYKTPEARIDEGSIGGTVIV
EEEECCCEEECCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCEEEE
HTRKPLDLPKNTIRGSIGYNYNDRSEEGNPRGSALWSWKNDDETFGALISATHDKQDLAR
EECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHEECCCCHHHHHH
AGIEYFGYTTGANIPASATITGDGSDVATARVPAGISSAFFQQTRERSGLQGALQWKPNE
HCHHHEEEECCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC
QNEFNLTGLYIKGKYNNFSQARYVCPNCSSPAADGSLDANGNQVQINNMRLIDRATVQDG
CCCEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEECHHCCC
VVTSANFADNGLAQPYSQLDTIYRESTVTTKSLNLRHDWSGEKWVFTTQGGYTEATGGKN
CEEECCCCCCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCEEEEEECCCEEECCCCCC
PEYLMKYLMQDGGYNYAFDGRNTAVNYENGGAANWVLPGNPAGLAPGQVGNVPGTGTPIM
HHHHHHHHHHCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
QAGGIAYQKSKDDEKYFQWDASRDLEWGPFTKLQFGYKYINHNNGVEARGNRINSTDAVS
HCCCEEEECCCCCCHHEEECCCCCCCCCCCCEEEECEEEEECCCCCCCCCCCCCCCCCEE
LTQFNPGRTPSSLYDGLGASGDLTNWSTASLDSVRNYLLSQPQGPYLTDFGASFQVKEIT
EEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCEEHHHHH
QNVYTQLNFESGQWRGNVGVRLVDTTNKSEFWQSNDGGANFDRVAETNDYRKALPSFNIA
HHHHHEEECCCCCEECCCCEEEEECCCCHHCCCCCCCCCCHHHHCCCCHHHHHCCCCEEE
YDVTDDAVLRFSAAKVIARPRYADLAGTFTINSGTGDLTANGGNPDLKPYESTNYDLAAE
EECCCCHHEEEHHHHHHCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEE
WYFAPSSMLSGEVFYRDISSYIVSTTTTQPLNPAPPARPGDYQVTTPVNVSDAKVTGVSV
EEECCHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEE
NYQQTFGLGFGLQANYTFAESDSSSGLNLPYLSRDTYNVIPYWEHGDWTVRVNYSYRSKY
ECHHHCCCCCCCCCCEEEECCCCCCCCCCCEECCCCEEEEEEEECCCEEEEEEEHHHHHH
FTQIGRLQSRDFADAYKQLDLNASYQITDYMGITFGATNLLDSTYRVFSNTRDTPTAFYK
HHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHC
NGRGYQAQLNFKF
CCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA