| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is thiL [H]
Identifier: 66047684
GI number: 66047684
Start: 5320863
End: 5321828
Strand: Reverse
Name: thiL [H]
Synonym: Psyr_4457
Alternate gene names: 66047684
Gene position: 5321828-5320863 (Counterclockwise)
Preceding gene: 66047685
Following gene: 66047683
Centisome position: 87.33
GC content: 66.56
Gene sequence:
>966_bases ATGGGAGAGTTCGAGCTGATCCGCAATTACTTCGCCGCCGCGCCCTGTGCGCAGGCGGGCGAGGAAGTTGCCCTGGGGAT CGGCGATGACTGCGCGCTGCTGGCGTTGACGCCCGGCGAGCAGTTGGCGATCTCGACCGACACCCTGGTTGCCGGGGTGC ATTTTCCTGATGTCTGCGACCCCTTTCTGCTTGGCCAGCGTGCGCTGGCAGTGTCTGCCAGTGACCTGGCGGCCATGGGC GCCAGGCCTGTCGCGTTCACCCTTGCCCTGACCCTGCCGCAGGTCGATGCCGACTGGCTGCAGACCTTCGCTCGCGGCCT GAACCAGATGGCGCAAGGCTGTTCGCTGCGTCTGATCGGTGGTGATACCACGCGCGGTCCCTTGAGCCTGACCCTGACAG TGTTTGGCGCTGTGCCGGCCGGATCAGCCCTGACCCGCGCGGGTGCCGAGGCGGGTGACCTGCTGTGTGTCGGCGGCACG CTGGGTGATGGCGCCGGTGCATTGCCGCTGGTATTGAAGCAGCGCAGCGCCGAACCCTCGATCGCCGAAGCATTGCTGGC CCGCTACTGGTCGCCCCAACCGCAACTGGCGCTGGGCCAGGCCTTGCGCGGCAGGGCGACGTCGGCGCTGGACATCTCCG ATGGGCTGCTGGCCGACTGCGGACATATCGCTCGCGCGTCGGGTGTGCGTCTGGTGGTCGAGCGCGACCGGCTGCCGATG TCCGACCCATTGCTGACCTTGTTCGATCTGCCCTCTGCCCGACAGGCCGCGCTGAGCGGTGGTGATGATTACATCCTGGC CTTCACCCTGCCCTCCGAACATCTGCCGGTTCTGCTGAAAGAAGGCTGGCCGGTGCATGTCATTGGCCGGGTAGAGCAGG GGCAAGGCGTCGTGCTTGTCGACGACACGGGGCAAGACGTCACACCCGACACGCGTGGCTACCAGCATTTTGGCGGTGAG CAGTGA
Upstream 100 bases:
>100_bases GACGGCCACAAGTTCGTCAATGGCGTGCTGGACAAGCTGGCGCCGCGCCTGCGTGAAGTCGAAGTGAAGGCCCACAAGCG CTGATTCGCGCCTGACCTTC
Downstream 100 bases:
>100_bases GCGGATGAGCGCTTCTATCTATCGAACTTTATGATCTAAATGCCCGAGAATTCACCCTGAGCGTCTGCAGGAACCTGCTG TTACAATGCAAATCTTGCGA
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MGEFELIRNYFAAAPCAQAGEEVALGIGDDCALLALTPGEQLAISTDTLVAGVHFPDVCDPFLLGQRALAVSASDLAAMG ARPVAFTLALTLPQVDADWLQTFARGLNQMAQGCSLRLIGGDTTRGPLSLTLTVFGAVPAGSALTRAGAEAGDLLCVGGT LGDGAGALPLVLKQRSAEPSIAEALLARYWSPQPQLALGQALRGRATSALDISDGLLADCGHIARASGVRLVVERDRLPM SDPLLTLFDLPSARQAALSGGDDYILAFTLPSEHLPVLLKEGWPVHVIGRVEQGQGVVLVDDTGQDVTPDTRGYQHFGGE Q
Sequences:
>Translated_321_residues MGEFELIRNYFAAAPCAQAGEEVALGIGDDCALLALTPGEQLAISTDTLVAGVHFPDVCDPFLLGQRALAVSASDLAAMG ARPVAFTLALTLPQVDADWLQTFARGLNQMAQGCSLRLIGGDTTRGPLSLTLTVFGAVPAGSALTRAGAEAGDLLCVGGT LGDGAGALPLVLKQRSAEPSIAEALLARYWSPQPQLALGQALRGRATSALDISDGLLADCGHIARASGVRLVVERDRLPM SDPLLTLFDLPSARQAALSGGDDYILAFTLPSEHLPVLLKEGWPVHVIGRVEQGQGVVLVDDTGQDVTPDTRGYQHFGGE Q >Mature_320_residues GEFELIRNYFAAAPCAQAGEEVALGIGDDCALLALTPGEQLAISTDTLVAGVHFPDVCDPFLLGQRALAVSASDLAAMGA RPVAFTLALTLPQVDADWLQTFARGLNQMAQGCSLRLIGGDTTRGPLSLTLTVFGAVPAGSALTRAGAEAGDLLCVGGTL GDGAGALPLVLKQRSAEPSIAEALLARYWSPQPQLALGQALRGRATSALDISDGLLADCGHIARASGVRLVVERDRLPMS DPLLTLFDLPSARQAALSGGDDYILAFTLPSEHLPVLLKEGWPVHVIGRVEQGQGVVLVDDTGQDVTPDTRGYQHFGGEQ
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=323, Percent_Identity=47.6780185758514, Blast_Score=242, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 33371; Mature: 33240
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEFELIRNYFAAAPCAQAGEEVALGIGDDCALLALTPGEQLAISTDTLVAGVHFPDVCD CCHHHHHHHHHHCCCHHHCCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECCCCCCCC PFLLGQRALAVSASDLAAMGARPVAFTLALTLPQVDADWLQTFARGLNQMAQGCSLRLIG HHHHCCHHEEECHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEC GDTTRGPLSLTLTVFGAVPAGSALTRAGAEAGDLLCVGGTLGDGAGALPLVLKQRSAEPS CCCCCCCEEEEEEEEECCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHEECCCCCCH IAEALLARYWSPQPQLALGQALRGRATSALDISDGLLADCGHIARASGVRLVVERDRLPM HHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC SDPLLTLFDLPSARQAALSGGDDYILAFTLPSEHLPVLLKEGWPVHVIGRVEQGQGVVLV CCCCEEEECCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCCEEEE DDTGQDVTPDTRGYQHFGGEQ ECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GEFELIRNYFAAAPCAQAGEEVALGIGDDCALLALTPGEQLAISTDTLVAGVHFPDVCD CHHHHHHHHHHCCCHHHCCCEEEEECCCCEEEEEECCCCCEEEECCEEEEECCCCCCCC PFLLGQRALAVSASDLAAMGARPVAFTLALTLPQVDADWLQTFARGLNQMAQGCSLRLIG HHHHCCHHEEECHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEC GDTTRGPLSLTLTVFGAVPAGSALTRAGAEAGDLLCVGGTLGDGAGALPLVLKQRSAEPS CCCCCCCEEEEEEEEECCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHEECCCCCCH IAEALLARYWSPQPQLALGQALRGRATSALDISDGLLADCGHIARASGVRLVVERDRLPM HHHHHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC SDPLLTLFDLPSARQAALSGGDDYILAFTLPSEHLPVLLKEGWPVHVIGRVEQGQGVVLV CCCCEEEECCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCCEEEE DDTGQDVTPDTRGYQHFGGEQ ECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]