| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ybeZ [H]
Identifier: 66047573
GI number: 66047573
Start: 5199803
End: 5200825
Strand: Direct
Name: ybeZ [H]
Synonym: Psyr_4346
Alternate gene names: 66047573
Gene position: 5199803-5200825 (Clockwise)
Preceding gene: 66047572
Following gene: 66047574
Centisome position: 85.33
GC content: 60.7
Gene sequence:
>1023_bases TTGAACGCACCCATAGAACCTCATCGCTTCACCCTCGAGCCTTTCGAGGCCCATCGTTTCGCCAACTTGTGCGGGCAACT CGACGAGCACTTGCGCCTGATCGAGCAACGCCTGGACATCGAGATCCGCAATCGCGGCAATCAATTCGAGCTCATTGGCG ACCCCAAACAAAGTCATTCCGCCGAGAACCTGCTGCGCCGTCTGTACCGGGAAACCAAAGGTACCGAACTGACGCCGGAC ATGGTCCACCTGTTTCTCCAGGAATCGGGGGTGGACGGCCTCGACAACCACCCTGCCGCCGAAGTCGGCGTCTCGCTGCG CACCAAAAAGGGCATGATTCGCCCGCGCGGCCTGAACCAGCAGCGTTACGTCAAGGAAGTCCTCAGCAACGACATCAACT TCGGCATTGGCCCGGCGGGTACCGGCAAGACCTACCTGGCGGTGGCCTGCGCGGTGGATGCACTGGAGCGCGAGCAGATC CGACGCATCCTGCTGGTGCGCCCGGCGGTCGAGGCTGGCGAGAAGCTGGGCTTCCTGCCCGGCGATCTGGCGCAGAAGAT CGACCCGTACCTGCGCCCGCTGTATGACGCGCTGTACGAGATGCTCGGTTTCGAATACGTCGCCAAGCTGATCGAGAAGC AGGTCATTGAAGTGGCACCGCTGGCTTACATGCGCGGACGCACCCTTAATAACAGCTTCATCATTCTCGACGAAAGTCAG AACACCACCGTCGAGCAGATGAAGATGTTCCTGACCCGTATCGGCTTCGGCTCCACGGCCGTGATCACCGGCGACATCAC CCAGGTCGACCTGCCCAAAGGCACTCGCTCCGGGCTGACGCATGTCATCGATGTGCTCAAGGACGTGCCGGGCATCAGCT TCACGCACTTCAAACCCAAGGATGTGGTTCGCCACCCGCTGGTACAGCGCATCGTCGAAGCCTACGAGCGTTTCGACGAC CGCCTCAGCGATGGTCCGTCGGGCAACAACATTTACCCACGGGACAAACACCGCGATGCTTGA
Upstream 100 bases:
>100_bases TCCCTGGCGCGGCCTTTAACAAGGCAAAGCTTTCGCACAACCAGCGCTAGGGTTATTCTTCAATACATCTCAATTGCCGC CGGACGGCCATTAAACGACC
Downstream 100 bases:
>100_bases GCTGGACCTGCAGGTTGCAAGCGAGACCAGCGCCCCTGACGAAGCCCGATTGCGCCTCTGGTGTGAAATGGGCTTGCGTC AGCGCAGTGCCGACTCCGAG
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MNAPIEPHRFTLEPFEAHRFANLCGQLDEHLRLIEQRLDIEIRNRGNQFELIGDPKQSHSAENLLRRLYRETKGTELTPD MVHLFLQESGVDGLDNHPAAEVGVSLRTKKGMIRPRGLNQQRYVKEVLSNDINFGIGPAGTGKTYLAVACAVDALEREQI RRILLVRPAVEAGEKLGFLPGDLAQKIDPYLRPLYDALYEMLGFEYVAKLIEKQVIEVAPLAYMRGRTLNNSFIILDESQ NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPKGTRSGLTHVIDVLKDVPGISFTHFKPKDVVRHPLVQRIVEAYERFDD RLSDGPSGNNIYPRDKHRDA
Sequences:
>Translated_340_residues MNAPIEPHRFTLEPFEAHRFANLCGQLDEHLRLIEQRLDIEIRNRGNQFELIGDPKQSHSAENLLRRLYRETKGTELTPD MVHLFLQESGVDGLDNHPAAEVGVSLRTKKGMIRPRGLNQQRYVKEVLSNDINFGIGPAGTGKTYLAVACAVDALEREQI RRILLVRPAVEAGEKLGFLPGDLAQKIDPYLRPLYDALYEMLGFEYVAKLIEKQVIEVAPLAYMRGRTLNNSFIILDESQ NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPKGTRSGLTHVIDVLKDVPGISFTHFKPKDVVRHPLVQRIVEAYERFDD RLSDGPSGNNIYPRDKHRDA >Mature_340_residues MNAPIEPHRFTLEPFEAHRFANLCGQLDEHLRLIEQRLDIEIRNRGNQFELIGDPKQSHSAENLLRRLYRETKGTELTPD MVHLFLQESGVDGLDNHPAAEVGVSLRTKKGMIRPRGLNQQRYVKEVLSNDINFGIGPAGTGKTYLAVACAVDALEREQI RRILLVRPAVEAGEKLGFLPGDLAQKIDPYLRPLYDALYEMLGFEYVAKLIEKQVIEVAPLAYMRGRTLNNSFIILDESQ NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPKGTRSGLTHVIDVLKDVPGISFTHFKPKDVVRHPLVQRIVEAYERFDD RLSDGPSGNNIYPRDKHRDA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=323, Percent_Identity=60.061919504644, Blast_Score=374, Evalue=1e-105, Organism=Escherichia coli, GI1787257, Length=302, Percent_Identity=37.4172185430464, Blast_Score=191, Evalue=5e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38437; Mature: 38437
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPIEPHRFTLEPFEAHRFANLCGQLDEHLRLIEQRLDIEIRNRGNQFELIGDPKQSHS CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCHHCCC AENLLRRLYRETKGTELTPDMVHLFLQESGVDGLDNHPAAEVGVSLRTKKGMIRPRGLNQ HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCH QRYVKEVLSNDINFGIGPAGTGKTYLAVACAVDALEREQIRRILLVRPAVEAGEKLGFLP HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC GDLAQKIDPYLRPLYDALYEMLGFEYVAKLIEKQVIEVAPLAYMRGRTLNNSFIILDESQ CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPKGTRSGLTHVIDVLKDVPGISFTHFKPK CCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHH DVVRHPLVQRIVEAYERFDDRLSDGPSGNNIYPRDKHRDA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNAPIEPHRFTLEPFEAHRFANLCGQLDEHLRLIEQRLDIEIRNRGNQFELIGDPKQSHS CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECCCHHCCC AENLLRRLYRETKGTELTPDMVHLFLQESGVDGLDNHPAAEVGVSLRTKKGMIRPRGLNQ HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCH QRYVKEVLSNDINFGIGPAGTGKTYLAVACAVDALEREQIRRILLVRPAVEAGEKLGFLP HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC GDLAQKIDPYLRPLYDALYEMLGFEYVAKLIEKQVIEVAPLAYMRGRTLNNSFIILDESQ CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC NTTVEQMKMFLTRIGFGSTAVITGDITQVDLPKGTRSGLTHVIDVLKDVPGISFTHFKPK CCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHH DVVRHPLVQRIVEAYERFDDRLSDGPSGNNIYPRDKHRDA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]