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The map label for this gene is cmoA [H]

Identifier: 66047173

GI number: 66047173

Start: 4694539

End: 4695282

Strand: Direct

Name: cmoA [H]

Synonym: Psyr_3946

Alternate gene names: 66047173

Gene position: 4694539-4695282 (Clockwise)

Preceding gene: 66047172

Following gene: 66047174

Centisome position: 77.04

GC content: 59.68

Gene sequence:

>744_bases
GTGAGCAAAGAAACCGACCGCATTTTCGCCCAGCCGCTGTCCCAGGTACCTGACTTCGCCTTCAACGAAGACGTGGTGCG
GGTATTCCCGGACATGATCAAACGCTCGGTGCCCGGTTATCCGACGATTGTCGAAAACCTCGGTGTCTTGGCCGCGCAAT
TTGCCCAGCCAAACACAGTGCTCTATGACTTGGGCAGTTCTCTGGGCGCCGTCACCCAGGCCCTGCGCCGCCATGTGCGT
GGCGAGGGTTGTGAGGTCATCGCGATAGACAACTCCAGTGCCATGGTCGAGCGTTGCCGTGAATACCTCAACGCGCAGGA
CTCCATGTTTCAGGAGTTGTTGCCGGTGCAGGTGCTCGAAGGCGACATCCTCGCGCTGGCGTTCAAACCGGCCTCGGTGG
TGGCGCTGAACTTCACCCTGCAATTCATCGCTCCCGAACAGCGCCTGGCATTGCTCGGGCGCATTCGTGATGCACTGGTG
CCCGGCGGCGCGCTGATTCTCTCGGAAAAGCTGCGCTTCGATGACCCGCAGGAACAGGCGCTGCTGACCGACCTGCACAT
CGCCTTCAAACGCGCCAACGGCTACAGCGACCTGGAAATTGCCCAGAAGCGCAGCGCCATCGAAAACGTCATGAAACCCG
ACAGCCTCGAAGAACACCGCCAACGCCTGCTTGCCGCAGGTTTTTCCAAGGTGGTGCCCTGGTTTCAATGCCTTAACTTC
ACCTCGTTGATTGCCCTGCCATGA

Upstream 100 bases:

>100_bases
GGCGTTGCGCGCGGCTTGTCCGACAGCACGTACTGCACCATGCATCCCGGCGGCAACTTGGCTAGAATGCCCGCCTTTCA
AAGCCTTCGCCGGAACCGCC

Downstream 100 bases:

>100_bases
TTGATCTCGCTCCCCTCGTCCGTCGTCTGGCGGGAACCCCTCTGGCCGACTGGGCCAATGGCCTGCAAGCCCAGCTCGAC
ACCAAGATGGCCAAGGGTCA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSKETDRIFAQPLSQVPDFAFNEDVVRVFPDMIKRSVPGYPTIVENLGVLAAQFAQPNTVLYDLGSSLGAVTQALRRHVR
GEGCEVIAIDNSSAMVERCREYLNAQDSMFQELLPVQVLEGDILALAFKPASVVALNFTLQFIAPEQRLALLGRIRDALV
PGGALILSEKLRFDDPQEQALLTDLHIAFKRANGYSDLEIAQKRSAIENVMKPDSLEEHRQRLLAAGFSKVVPWFQCLNF
TSLIALP

Sequences:

>Translated_247_residues
MSKETDRIFAQPLSQVPDFAFNEDVVRVFPDMIKRSVPGYPTIVENLGVLAAQFAQPNTVLYDLGSSLGAVTQALRRHVR
GEGCEVIAIDNSSAMVERCREYLNAQDSMFQELLPVQVLEGDILALAFKPASVVALNFTLQFIAPEQRLALLGRIRDALV
PGGALILSEKLRFDDPQEQALLTDLHIAFKRANGYSDLEIAQKRSAIENVMKPDSLEEHRQRLLAAGFSKVVPWFQCLNF
TSLIALP
>Mature_246_residues
SKETDRIFAQPLSQVPDFAFNEDVVRVFPDMIKRSVPGYPTIVENLGVLAAQFAQPNTVLYDLGSSLGAVTQALRRHVRG
EGCEVIAIDNSSAMVERCREYLNAQDSMFQELLPVQVLEGDILALAFKPASVVALNFTLQFIAPEQRLALLGRIRDALVP
GGALILSEKLRFDDPQEQALLTDLHIAFKRANGYSDLEIAQKRSAIENVMKPDSLEEHRQRLLAAGFSKVVPWFQCLNFT
SLIALP

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family [H]

Homologues:

Organism=Escherichia coli, GI1788177, Length=241, Percent_Identity=53.5269709543568, Blast_Score=270, Evalue=5e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005271 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27426; Mature: 27295

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKETDRIFAQPLSQVPDFAFNEDVVRVFPDMIKRSVPGYPTIVENLGVLAAQFAQPNTV
CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHH
LYDLGSSLGAVTQALRRHVRGEGCEVIAIDNSSAMVERCREYLNAQDSMFQELLPVQVLE
HHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC
GDILALAFKPASVVALNFTLQFIAPEQRLALLGRIRDALVPGGALILSEKLRFDDPQEQA
CCEEEEEECCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCHHEEECHHCCCCCHHHH
LLTDLHIAFKRANGYSDLEIAQKRSAIENVMKPDSLEEHRQRLLAAGFSKVVPWFQCLNF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
TSLIALP
HHHHCCC
>Mature Secondary Structure 
SKETDRIFAQPLSQVPDFAFNEDVVRVFPDMIKRSVPGYPTIVENLGVLAAQFAQPNTV
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHH
LYDLGSSLGAVTQALRRHVRGEGCEVIAIDNSSAMVERCREYLNAQDSMFQELLPVQVLE
HHHHCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHC
GDILALAFKPASVVALNFTLQFIAPEQRLALLGRIRDALVPGGALILSEKLRFDDPQEQA
CCEEEEEECCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCHHEEECHHCCCCCHHHH
LLTDLHIAFKRANGYSDLEIAQKRSAIENVMKPDSLEEHRQRLLAAGFSKVVPWFQCLNF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCH
TSLIALP
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA