Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66047172

Identifier: 66047172

GI number: 66047172

Start: 4694046

End: 4694438

Strand: Direct

Name: 66047172

Synonym: Psyr_3945

Alternate gene names: NA

Gene position: 4694046-4694438 (Clockwise)

Preceding gene: 66047171

Following gene: 66047173

Centisome position: 77.03

GC content: 63.87

Gene sequence:

>393_bases
ATGACCCCTGCCCGTTTCATTGCCCCGCTGAGCCTTGCGCTGCTGACGGCGTGCGCTCAGACGCCGAAAAACATTGTTTC
CATCGACACGCAAAGCGACTGCCCGCTGACACTCACGTCCGGGCAGACATTGATCCTGACCCTGCCCAGCAACCCGACCA
CCGGCTTTCGCTGGCTGACCCAGAACCCGGCCCAGAACATCCTGCGCAGCCTGGGCCCTGAGGTGTATGCCAACGCCGAG
AGCAAGGAAATGGTCGGCAACGGTGGGCAGTCGGTCTGGCGCTTCAAGGCCACCGATGCCGGGACCGGCCGGCTGATGAT
GGTCTATCAGCAGCCCTGGGCACCCGAAGTCGCCCCGGAGCAGACCTTCGAGTGCGCCATCAGCGTGAAGTGA

Upstream 100 bases:

>100_bases
GACGCTCTGCGTCCGATCCACAGCGCGACACCTGTCGTACTCCCCCACAAAACTCCGATCAGTTATCCTTGCGCCTCGTA
TCGCGATACCGGAACTTGCC

Downstream 100 bases:

>100_bases
GGCGTTGCGCGCGGCTTGTCCGACAGCACGTACTGCACCATGCATCCCGGCGGCAACTTGGCTAGAATGCCCGCCTTTCA
AAGCCTTCGCCGGAACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein-Like Protein; Inhibitor Of Cysteine Peptidase

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTPARFIAPLSLALLTACAQTPKNIVSIDTQSDCPLTLTSGQTLILTLPSNPTTGFRWLTQNPAQNILRSLGPEVYANAE
SKEMVGNGGQSVWRFKATDAGTGRLMMVYQQPWAPEVAPEQTFECAISVK

Sequences:

>Translated_130_residues
MTPARFIAPLSLALLTACAQTPKNIVSIDTQSDCPLTLTSGQTLILTLPSNPTTGFRWLTQNPAQNILRSLGPEVYANAE
SKEMVGNGGQSVWRFKATDAGTGRLMMVYQQPWAPEVAPEQTFECAISVK
>Mature_129_residues
TPARFIAPLSLALLTACAQTPKNIVSIDTQSDCPLTLTSGQTLILTLPSNPTTGFRWLTQNPAQNILRSLGPEVYANAES
KEMVGNGGQSVWRFKATDAGTGRLMMVYQQPWAPEVAPEQTFECAISVK

Specific function: Unknown

COG id: COG5513

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14069; Mature: 13938

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPARFIAPLSLALLTACAQTPKNIVSIDTQSDCPLTLTSGQTLILTLPSNPTTGFRWLT
CCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCCCEEEEE
QNPAQNILRSLGPEVYANAESKEMVGNGGQSVWRFKATDAGTGRLMMVYQQPWAPEVAPE
CCHHHHHHHHCCCCEEECCCCHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCC
QTFECAISVK
CCEEEEEECC
>Mature Secondary Structure 
TPARFIAPLSLALLTACAQTPKNIVSIDTQSDCPLTLTSGQTLILTLPSNPTTGFRWLT
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCCCEEEEE
QNPAQNILRSLGPEVYANAESKEMVGNGGQSVWRFKATDAGTGRLMMVYQQPWAPEVAPE
CCHHHHHHHHCCCCEEECCCCHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCC
QTFECAISVK
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA