| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is braD [H]
Identifier: 66047073
GI number: 66047073
Start: 4585073
End: 4585996
Strand: Direct
Name: braD [H]
Synonym: Psyr_3846
Alternate gene names: 66047073
Gene position: 4585073-4585996 (Clockwise)
Preceding gene: 66047072
Following gene: 66047074
Centisome position: 75.24
GC content: 60.06
Gene sequence:
>924_bases ATGCCCGAGTTATTCCACTACATGCAGCAGCTGGTCAATGGCCTGACCATTGGCAGTACGTATGCATTGATCGCCATCGG TTACACGATGGTGTACGGCATCATCGGAATGATCAACTTCGCCCATGGCGAGGTGTACATGATCGGTTCCTATGTCGCTT TCATGGCACTCGCCGGTCTGGCGATGCTGGGTATTCACAGCCTGCCGCTGCTGATGATTGCCGGTTTTGCCGCTGCGATC ATCGTGACCAGTGCCTACGGATACAGCATCGAGCGTGTGGCCTACCGTCCGTTGCGCAACAGCAACCGTCTGATCCCCCT GATTTCTGCCATCGGCATGTCGATCTTTCTGCAGAACTCGGTCCAGCTTTCCCAGGGCTCCGGCAACTTCGCCATCCCCA ACCTGCTGCCCGGCAGCCTCTCGTTCGGGCCTGGTGGCGCCGAGGAAGTGCTGATTTCCTACATGCAGATCGTGGTGTTC GTCGTCACCCTGCTGGCCATGACCGGCCTGACCCTGTTCATCTCCCGCTCGCGAATGGGCCGCGCCTGCCGCGCCTGCGC CGAGGACATGAAGATGGCCAATCTGCTGGGCATCAACACCAACAACATCATCGCCCTGACCTTCGTGGTCGGTGCTGCAC TGGCCGCCGTCGCCGCCATGCTGCTAAGCATGCAATACGGCGTGATCAACCCCAACGCCGGCTTCCTCGTCGGCCTGAAA GCCTTCACGGCTGCAGTACTGGGCGGTATCGGTTCGATCCCGGGTGCCGTGCTCGGTGGTCTGGTGCTGGGCGTCGCCGA AGCCTTCGGTGCCGACATTTTTGGTGATCAGTACAAGGACGTCGTGGCTTTCGGCCTGCTGGTCCTGGTGCTGCTGTTCC GACCGACCGGCATTCTGGGTCGTCCGGAGGTTGAGAAAGTATGA
Upstream 100 bases:
>100_bases CAATAGCGGTTCCTTGACAGCGCAACAGGCTACGCATCGACAGAATGCCACCCCGGCGCACGTCAGAGAAATGCAGATCA GGTTTTTAGGAGCGCGGTAA
Downstream 100 bases:
>100_bases GCAAGTCTTTCAAACAGGCGCTGTTCAGCGCCGCACTGGTCTGGGCTGTGGCCTACCCGGTGTTTGGCCTGAAACTGGCC TTTTCCGGCGTCACCCTGCA
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPELFHYMQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPLLMIAGFAAAI IVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNFAIPNLLPGSLSFGPGGAEEVLISYMQIVVF VVTLLAMTGLTLFISRSRMGRACRACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNAGFLVGLK AFTAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEKV
Sequences:
>Translated_307_residues MPELFHYMQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPLLMIAGFAAAI IVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNFAIPNLLPGSLSFGPGGAEEVLISYMQIVVF VVTLLAMTGLTLFISRSRMGRACRACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNAGFLVGLK AFTAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEKV >Mature_306_residues PELFHYMQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGLAMLGIHSLPLLMIAGFAAAII VTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNSVQLSQGSGNFAIPNLLPGSLSFGPGGAEEVLISYMQIVVFV VTLLAMTGLTLFISRSRMGRACRACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNAGFLVGLKA FTAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEKV
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=308, Percent_Identity=67.2077922077922, Blast_Score=392, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32227; Mature: 32096
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELFHYMQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGL CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH AMLGIHSLPLLMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC VQLSQGSGNFAIPNLLPGSLSFGPGGAEEVLISYMQIVVFVVTLLAMTGLTLFISRSRMG CEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RACRACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNAGFLVGLK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AFTAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCC RPEVEKV CCCCCCC >Mature Secondary Structure PELFHYMQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFMALAGL CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH AMLGIHSLPLLMIAGFAAAIIVTSAYGYSIERVAYRPLRNSNRLIPLISAIGMSIFLQNS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC VQLSQGSGNFAIPNLLPGSLSFGPGGAEEVLISYMQIVVFVVTLLAMTGLTLFISRSRMG CEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RACRACAEDMKMANLLGINTNNIIALTFVVGAALAAVAAMLLSMQYGVINPNAGFLVGLK HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AFTAAVLGGIGSIPGAVLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCC RPEVEKV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]