| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is braC [H]
Identifier: 66047072
GI number: 66047072
Start: 4583721
End: 4584845
Strand: Direct
Name: braC [H]
Synonym: Psyr_3845
Alternate gene names: 66047072
Gene position: 4583721-4584845 (Clockwise)
Preceding gene: 66047070
Following gene: 66047073
Centisome position: 75.22
GC content: 59.2
Gene sequence:
>1125_bases ATGACTAAGGGTACCAATAAGCTTTCAAGGCTGTTTGCCGCACTGGTTATGGCGGGGGTTGCCAGCCATTCGTTCGCAGC TGACACCATCAAGATCGGCATCGCCGGCCCCAAGACCGGCCCTGTCGCCGAATACGGCACCATGCAGTTCAATGGTGCCA GGATGGCCATCGAGCAGATCAACGCCAAAGGCGGCGTAGATGGCAAAAAGCTTGAAGCCGTCGAATATGATGACGCCTGC GATCCGAAACAGGCCGTTGCGGTCGCCAACAAGGTGGTCAACGACGGCGTGAAATACGTGGTCGGCCACCTCTGCTCTAG CTCCGCCCAGCCAGCCTCCGACGTTTACGAAGACGAAGGCATCATCATGGTGACCCCGGCTGCCACCAGCCCGGAAATCA CCGCGCGCGGCTACAAACTGGTGTTCCGCACCATCGGTCTCGACAGCGCCCAGGGTCCGGCCGCTGGCAACTACATTGCC GACGTCGCCAAGCCGAAAATCGTTGCAGTGATCCACGACAAGCAGCAGTACGGCGAAGGTATCGCGACAGCCGTCAAGCA AACGCTGGAGAAAAAAGGCGTCAAGGTTGCACTGTTCGAAGGCATCAACGCTGGCGACAAGGACTTCTCCTCGCTGATTC AAAAACTCAAGCAGGCCAACGTCGACTTCGTCTACTACGGCGGCTACCACCCTGAGCTGGGCCAGATCCTGCGCCAGTCC AAGGAAAAAGGCCTGAACGCCAAGTTCATGGGCCCTGAAGGCGTCGGCAACGAGTCGATCTCGCAAATTGCTGGCGAAGC TTCCGAAGGCCTGCTGGTCACCCTGCCAAAATCCTTCGACCAGGACCCGGCCAACCAGGCGCTGACCGAGGCCTTCAAGG CCAAGAGTCAGGACCCGAGCGGCCCGTTCGTGTACCCGTCCTACTCCGCCGTACAGGTCATTGCTGACGGCATCGCTGCC GCCAAGTCCGAAGACACCACCAAGGTGGCTGCTGCCATCCACGCCGGTACCTTCAAGACGCCAATGGGCGAGCTGAGCTA CGACGAAAAAGGTGACCTGAAGAACTTCCAGTTCGTGGTCTACGAGTGGCACTTCGGCAAGCCCAAGACCGAAGCCGCCA AATAA
Upstream 100 bases:
>100_bases GTTCCGGTACAGTTGGCGGTGCGGGACAACCGGTGATCGAATCGGTCCTGGAGCCTTGGCCATCAGGATTATAAAAACTA CAACGCAAGAGTGGAGCATC
Downstream 100 bases:
>100_bases GCTGCTTGCGTTAACCCTCAAAGCCCACTGCCAGCGCAGTGGGCTTTGTTTTACGAATCCAGGCCCGTACGCAGGTTTCG GCAACCCGAACTGTATGCAC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTKGTNKLSRLFAALVMAGVASHSFAADTIKIGIAGPKTGPVAEYGTMQFNGARMAIEQINAKGGVDGKKLEAVEYDDAC DPKQAVAVANKVVNDGVKYVVGHLCSSSAQPASDVYEDEGIIMVTPAATSPEITARGYKLVFRTIGLDSAQGPAAGNYIA DVAKPKIVAVIHDKQQYGEGIATAVKQTLEKKGVKVALFEGINAGDKDFSSLIQKLKQANVDFVYYGGYHPELGQILRQS KEKGLNAKFMGPEGVGNESISQIAGEASEGLLVTLPKSFDQDPANQALTEAFKAKSQDPSGPFVYPSYSAVQVIADGIAA AKSEDTTKVAAAIHAGTFKTPMGELSYDEKGDLKNFQFVVYEWHFGKPKTEAAK
Sequences:
>Translated_374_residues MTKGTNKLSRLFAALVMAGVASHSFAADTIKIGIAGPKTGPVAEYGTMQFNGARMAIEQINAKGGVDGKKLEAVEYDDAC DPKQAVAVANKVVNDGVKYVVGHLCSSSAQPASDVYEDEGIIMVTPAATSPEITARGYKLVFRTIGLDSAQGPAAGNYIA DVAKPKIVAVIHDKQQYGEGIATAVKQTLEKKGVKVALFEGINAGDKDFSSLIQKLKQANVDFVYYGGYHPELGQILRQS KEKGLNAKFMGPEGVGNESISQIAGEASEGLLVTLPKSFDQDPANQALTEAFKAKSQDPSGPFVYPSYSAVQVIADGIAA AKSEDTTKVAAAIHAGTFKTPMGELSYDEKGDLKNFQFVVYEWHFGKPKTEAAK >Mature_373_residues TKGTNKLSRLFAALVMAGVASHSFAADTIKIGIAGPKTGPVAEYGTMQFNGARMAIEQINAKGGVDGKKLEAVEYDDACD PKQAVAVANKVVNDGVKYVVGHLCSSSAQPASDVYEDEGIIMVTPAATSPEITARGYKLVFRTIGLDSAQGPAAGNYIAD VAKPKIVAVIHDKQQYGEGIATAVKQTLEKKGVKVALFEGINAGDKDFSSLIQKLKQANVDFVYYGGYHPELGQILRQSK EKGLNAKFMGPEGVGNESISQIAGEASEGLLVTLPKSFDQDPANQALTEAFKAKSQDPSGPFVYPSYSAVQVIADGIAAA KSEDTTKVAAAIHAGTFKTPMGELSYDEKGDLKNFQFVVYEWHFGKPKTEAAK
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=356, Percent_Identity=57.0224719101124, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI48994941, Length=361, Percent_Identity=57.8947368421053, Blast_Score=449, Evalue=1e-127,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39608; Mature: 39477
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKGTNKLSRLFAALVMAGVASHSFAADTIKIGIAGPKTGPVAEYGTMQFNGARMAIEQI CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEECCHHHHHHHH NAKGGVDGKKLEAVEYDDACDPKQAVAVANKVVNDGVKYVVGHLCSSSAQPASDVYEDEG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC IIMVTPAATSPEITARGYKLVFRTIGLDSAQGPAAGNYIADVAKPKIVAVIHDKQQYGEG EEEEECCCCCCCCHHCHHEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEECHHHHCCH IATAVKQTLEKKGVKVALFEGINAGDKDFSSLIQKLKQANVDFVYYGGYHPELGQILRQS HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH KEKGLNAKFMGPEGVGNESISQIAGEASEGLLVTLPKSFDQDPANQALTEAFKAKSQDPS HHCCCCEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCC GPFVYPSYSAVQVIADGIAAAKSEDTTKVAAAIHAGTFKTPMGELSYDEKGDLKNFQFVV CCEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE YEWHFGKPKTEAAK EEEECCCCCCCCCC >Mature Secondary Structure TKGTNKLSRLFAALVMAGVASHSFAADTIKIGIAGPKTGPVAEYGTMQFNGARMAIEQI CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEECCHHHHHHHH NAKGGVDGKKLEAVEYDDACDPKQAVAVANKVVNDGVKYVVGHLCSSSAQPASDVYEDEG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC IIMVTPAATSPEITARGYKLVFRTIGLDSAQGPAAGNYIADVAKPKIVAVIHDKQQYGEG EEEEECCCCCCCCHHCHHEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEECHHHHCCH IATAVKQTLEKKGVKVALFEGINAGDKDFSSLIQKLKQANVDFVYYGGYHPELGQILRQS HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH KEKGLNAKFMGPEGVGNESISQIAGEASEGLLVTLPKSFDQDPANQALTEAFKAKSQDPS HHCCCCEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCC GPFVYPSYSAVQVIADGIAAAKSEDTTKVAAAIHAGTFKTPMGELSYDEKGDLKNFQFVV CCEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE YEWHFGKPKTEAAK EEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]