| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is cpxA [H]
Identifier: 66047020
GI number: 66047020
Start: 4508297
End: 4509547
Strand: Reverse
Name: cpxA [H]
Synonym: Psyr_3792
Alternate gene names: 66047020
Gene position: 4509547-4508297 (Counterclockwise)
Preceding gene: 66047021
Following gene: 66047019
Centisome position: 74.0
GC content: 62.91
Gene sequence:
>1251_bases ATGAGGCCGAACCGGCTGTTCTGGAAGCTGTTCCTGGCATTCTGGCTAGCGACCAGCCTGACCTTCATGGTCGGTGCCGG CCTGTTCATGTTCACCCAGTCAGGGCGGGGCGATCCTTCGTTCAGCACGGTGCTCGATAACGAAGTGCGCATTTTGCAGC GCTCGGGCATTGCCGCAGGGCAGGCGTTGCTCGATGCCTGGCAGCCGGAGGGGCAAGGCAGGGTCGGGCTGTACGACAAC CAGGGTCTGCTGCTGGCGGGCGAGGCGCTGGAGAATCCTCGCTTCGAACTGGCTGTGCACACACGCGAAGGTGCACTCGT GCACATCCGCTCTACCCAGCGCCCCAACCATGACGATCAACCTTCTCACCTCAATCCGCTGATCACCGGCACGGTCATGA GTGCGCTGTTCAGCTGGTTTCTCAGCAGCTATCTGGTGGCGCCGCTGATGAAATTGCGAGAGGCGATGGGCAAGGTCGCC AGAGGCCGTTTCGACACACGGGTAAAACCCGACATGGGCCGGCGGCGCGATGAAATCGTCGACCTTGCCGAGGATTGCGA CCGCATGGCCAATCAGCTCAAGGTCATGGCCGACTCCCAGCAACAACTGCTGCATGATATTTCCCATGAGCTGCGTTCGC CGCTGACGCGCATGAGTGCCGCCATCGGCCTGTTGCGCCAGGAGCCGACCCAACTGGACATGCTCGAACGCATCGAGCGC GAATCGGAGCGCATGGACTCACTGATCGAAGAATTGCTGACCCTGGCGCGCATGCAGAGCGATGTCGAAAGCCTGACGCG GGAAAAGGTCGATGTCATCAGCCTGCTGGCGGCCATCGTCGAGGATGCCGAATTCGAGGCCGGACTGAAGCAGTGTTGGG TCAGGCTGCAGGCTCCCGGGTCTTTCGTCGCGCAGGTCGACAGCGAACTGCTCTACCGGGCCTTCGAAAACGTGATCCGC AATGCCGTTCGCCACACGGCGGTCGGCACGGATGTGGTGGTTGTCGCCAACGTTCAGGCCCAGCCGCTGTGCCTGATGGT CAATGTCATCGATCAGGGGCCAGGTGTGGACGAGGCGTGCCTGCAACGGATTTTCCAGCCCTTCGAGCGCGGCCCGGAGA ATGCCGCGCAGGGCTTTGGCCTGGGCCTGGCCATCGCCCTGCGGGCTATCGAAATGCACGGCGGGCAGATCGCCGCGCGC AATAGGCCCGGCGGCGGTCTGGTGGTCGATGTGCTGCTGCCGGTGTCGTGA
Upstream 100 bases:
>100_bases ATGTGCACATCAGCAGCATTCGCCACAAACTCGGGCCGCGCAACGATAACCAGAGCTGGATACAGAGCGTGCGCAATCTG GGCTATATGTTGCTCACGCC
Downstream 100 bases:
>100_bases CGGCGCTTGCTGGTTTTGCCGCGTTTCGAATGGCCGTTATCCGCCCGTTGGTAAACAAAATCGGCCTTTGGTGGTAAAGA AACTCGGCCCCGGCGCTCGA
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MRPNRLFWKLFLAFWLATSLTFMVGAGLFMFTQSGRGDPSFSTVLDNEVRILQRSGIAAGQALLDAWQPEGQGRVGLYDN QGLLLAGEALENPRFELAVHTREGALVHIRSTQRPNHDDQPSHLNPLITGTVMSALFSWFLSSYLVAPLMKLREAMGKVA RGRFDTRVKPDMGRRRDEIVDLAEDCDRMANQLKVMADSQQQLLHDISHELRSPLTRMSAAIGLLRQEPTQLDMLERIER ESERMDSLIEELLTLARMQSDVESLTREKVDVISLLAAIVEDAEFEAGLKQCWVRLQAPGSFVAQVDSELLYRAFENVIR NAVRHTAVGTDVVVVANVQAQPLCLMVNVIDQGPGVDEACLQRIFQPFERGPENAAQGFGLGLAIALRAIEMHGGQIAAR NRPGGGLVVDVLLPVS
Sequences:
>Translated_416_residues MRPNRLFWKLFLAFWLATSLTFMVGAGLFMFTQSGRGDPSFSTVLDNEVRILQRSGIAAGQALLDAWQPEGQGRVGLYDN QGLLLAGEALENPRFELAVHTREGALVHIRSTQRPNHDDQPSHLNPLITGTVMSALFSWFLSSYLVAPLMKLREAMGKVA RGRFDTRVKPDMGRRRDEIVDLAEDCDRMANQLKVMADSQQQLLHDISHELRSPLTRMSAAIGLLRQEPTQLDMLERIER ESERMDSLIEELLTLARMQSDVESLTREKVDVISLLAAIVEDAEFEAGLKQCWVRLQAPGSFVAQVDSELLYRAFENVIR NAVRHTAVGTDVVVVANVQAQPLCLMVNVIDQGPGVDEACLQRIFQPFERGPENAAQGFGLGLAIALRAIEMHGGQIAAR NRPGGGLVVDVLLPVS >Mature_416_residues MRPNRLFWKLFLAFWLATSLTFMVGAGLFMFTQSGRGDPSFSTVLDNEVRILQRSGIAAGQALLDAWQPEGQGRVGLYDN QGLLLAGEALENPRFELAVHTREGALVHIRSTQRPNHDDQPSHLNPLITGTVMSALFSWFLSSYLVAPLMKLREAMGKVA RGRFDTRVKPDMGRRRDEIVDLAEDCDRMANQLKVMADSQQQLLHDISHELRSPLTRMSAAIGLLRQEPTQLDMLERIER ESERMDSLIEELLTLARMQSDVESLTREKVDVISLLAAIVEDAEFEAGLKQCWVRLQAPGSFVAQVDSELLYRAFENVIR NAVRHTAVGTDVVVVANVQAQPLCLMVNVIDQGPGVDEACLQRIFQPFERGPENAAQGFGLGLAIALRAIEMHGGQIAAR NRPGGGLVVDVLLPVS
Specific function: This protein is involved in several diverse cellular processes, such as the functioning of acetohydroxyacid synthetase I, in the biosynthesis of isoleucine and valine, the TraJ protein activation activity for tra gene expression in F plasmid, and the synt
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=273, Percent_Identity=35.1648351648352, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=30.2158273381295, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786600, Length=234, Percent_Identity=26.4957264957265, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786912, Length=239, Percent_Identity=30.9623430962343, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789808, Length=279, Percent_Identity=26.8817204301075, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1787894, Length=263, Percent_Identity=26.615969581749, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1790861, Length=248, Percent_Identity=27.4193548387097, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789149, Length=331, Percent_Identity=24.4712990936556, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1788549, Length=224, Percent_Identity=26.3392857142857, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI145693157, Length=250, Percent_Identity=27.2, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786783, Length=318, Percent_Identity=25.7861635220126, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082128, Length=239, Percent_Identity=25.5230125523013, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790551, Length=227, Percent_Identity=25.9911894273128, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1789403, Length=239, Percent_Identity=28.8702928870293, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=25.3164556962025, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 46131; Mature: 46131
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPNRLFWKLFLAFWLATSLTFMVGAGLFMFTQSGRGDPSFSTVLDNEVRILQRSGIAAG CCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHHHCCCHHH QALLDAWQPEGQGRVGLYDNQGLLLAGEALENPRFELAVHTREGALVHIRSTQRPNHDDQ HHHHHHCCCCCCCCEEEECCCCEEEECHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCC PSHLNPLITGTVMSALFSWFLSSYLVAPLMKLREAMGKVARGRFDTRVKPDMGRRRDEIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH DLAEDCDRMANQLKVMADSQQQLLHDISHELRSPLTRMSAAIGLLRQEPTQLDMLERIER HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ESERMDSLIEELLTLARMQSDVESLTREKVDVISLLAAIVEDAEFEAGLKQCWVRLQAPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC SFVAQVDSELLYRAFENVIRNAVRHTAVGTDVVVVANVQAQPLCLMVNVIDQGPGVDEAC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHH LQRIFQPFERGPENAAQGFGLGLAIALRAIEMHGGQIAARNRPGGGLVVDVLLPVS HHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCC >Mature Secondary Structure MRPNRLFWKLFLAFWLATSLTFMVGAGLFMFTQSGRGDPSFSTVLDNEVRILQRSGIAAG CCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHHHCCCHHH QALLDAWQPEGQGRVGLYDNQGLLLAGEALENPRFELAVHTREGALVHIRSTQRPNHDDQ HHHHHHCCCCCCCCEEEECCCCEEEECHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCC PSHLNPLITGTVMSALFSWFLSSYLVAPLMKLREAMGKVARGRFDTRVKPDMGRRRDEIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH DLAEDCDRMANQLKVMADSQQQLLHDISHELRSPLTRMSAAIGLLRQEPTQLDMLERIER HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ESERMDSLIEELLTLARMQSDVESLTREKVDVISLLAAIVEDAEFEAGLKQCWVRLQAPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC SFVAQVDSELLYRAFENVIRNAVRHTAVGTDVVVVANVQAQPLCLMVNVIDQGPGVDEAC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCHHH LQRIFQPFERGPENAAQGFGLGLAIALRAIEMHGGQIAARNRPGGGLVVDVLLPVS HHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]