| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is rhlE [H]
Identifier: 66047019
GI number: 66047019
Start: 4506809
End: 4508146
Strand: Reverse
Name: rhlE [H]
Synonym: Psyr_3791
Alternate gene names: 66047019
Gene position: 4508146-4506809 (Counterclockwise)
Preceding gene: 66047020
Following gene: 66047018
Centisome position: 73.98
GC content: 62.26
Gene sequence:
>1338_bases GTGTTTTCCGAATTCGCCCTGCACGAACGCCTGCTCAAAGCTGTGGCCGAGCTTAAATTTGTCGAGCCTACGCCCGTGCA GGCGGCCGCCATTCCGCTCGCACTGCAAGGGCGCGACCTGCGGGTGACTGCGCAAACCGGTAGCGGCAAGACCGCCGCAT TTGTGCTGCCGATCCTCAATCGTCTGATCGGCCCGGCCAAGGTCCGTGTCGATATTCGCGCGGTGATCCTGCTGCCGACC CGTGAGCTGGCTCAGCAGACGCTCAAGGAAGTCGAGCGCTTCTCGCAGTTCACCTTCGTCAAGGCCGGTTTGATCACCGG TGGCGAGGACTTCAAGGTTCAGGCTGCCATGCTGCGCAAGGTGCCGGACATTCTGATCGGCACGCCGGGTCGCCTGCTGG AGCAGTTGAACGCAGGCAACCTGGACCTCAAGCACGTTGAAGTGCTGGTACTGGACGAAGCCGACCGCATGCTGGACATG GGCTTCTCCGAAGACGTCGAGCGTCTGGCCGGCGAATGTGCCGGTCGCGAGCAGACCATGCTGTTCTCGGCGACCACCGG CGGCGCTGGCCTGCGGGAAATGATCGGCAAGGTGCTCAAGGATCCGCAGCACCTGCAAGTGAACAGCGTCAGCGAGCTGG CTTCCGGCACACGCCACCAGATCATCACCGCCGACCACAACGTGCACAAAGAGCAGGTTCTCAACTGGCTGCTGGCCAAC GAGACTTACCAGAAAGCCATTATCTTCACCAATACCAAGGCCATGGCCGACCGTCTGTATGGCCGCCTGGTAGCGCTGGA ATACAAGGCGTTCGTGCTGCACGGCGACAAGGACCAGAAGGACCGCAAGGCGGCCATCGACCGTCTCAAGCAGGGCGGCG CGAAAATCATGGTTGCCACCGATGTGGCGGCTCGTGGCCTTGATGTCGAAGGTCTGGACATGGTGATCAACTTCGACATG CCACGCAGCGGCGACGACTACGTCCACCGCGTCGGGCGTACCGGCCGCGCGGGCAGCGACGGTCTGGCGATCTCGCTGAT CTGTCATGGCGACTGGAACCTGATGTCGAGCGTGGAGCGCTATCTCAAGCAGAGCTTCGAGCGTCGCGTCATCAAGGAAG TCAAAGGCACCTACGGCGGGCCGAAGAAGGTCAAGGCCTCCGGCAAGGCAGTCGGCGTCAAGAAGAAAAAGACCGACGCC AAGGGCGACAAGAAGAAGGTCGCGGCCAAAGGGCCGACCAAACGCAAGACGGTCAACCGTCCCAAGTCTGACCTGGTCAG CCAGGACGGCATGGCCCCGCTGAAAAAACGCAGCACCCCGGCCCCGGCTGCCGAGTGA
Upstream 100 bases:
>100_bases GTAAACAAAATCGGCCTTTGGTGGTAAAGAAACTCGGCCCCGGCGCTCGAAACCGTTACGCTATGCAGCTGTATTTTTGT TTTTCGTCGAGGTAGCACCC
Downstream 100 bases:
>100_bases TTGCCGTGATCGCTCCCGAGCATTCGGGAGCGATCAATCTCTTTACAGTACTGATAACGCCTCGTTACACCGTCCGCCAG CTTCTCTGAACCGTCATTCA
Product: helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPT RELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDM GFSEDVERLAGECAGREQTMLFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLAN ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVATDVAARGLDVEGLDMVINFDM PRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVERYLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDA KGDKKKVAAKGPTKRKTVNRPKSDLVSQDGMAPLKKRSTPAPAAE
Sequences:
>Translated_445_residues MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPT RELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDM GFSEDVERLAGECAGREQTMLFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLAN ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVATDVAARGLDVEGLDMVINFDM PRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVERYLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDA KGDKKKVAAKGPTKRKTVNRPKSDLVSQDGMAPLKKRSTPAPAAE >Mature_445_residues MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPT RELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDM GFSEDVERLAGECAGREQTMLFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLAN ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVATDVAARGLDVEGLDMVINFDM PRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVERYLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDA KGDKKKVAAKGPTKRKTVNRPKSDLVSQDGMAPLKKRSTPAPAAE
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=373, Percent_Identity=40.4825737265416, Blast_Score=265, Evalue=6e-71, Organism=Homo sapiens, GI148613856, Length=364, Percent_Identity=36.8131868131868, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI38201710, Length=364, Percent_Identity=36.8131868131868, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=36.5921787709497, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI222352149, Length=365, Percent_Identity=34.7945205479452, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI45446747, Length=372, Percent_Identity=36.2903225806452, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI45446743, Length=372, Percent_Identity=36.2903225806452, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=35.752688172043, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=35.752688172043, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=35.752688172043, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=36.7403314917127, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=38.0681818181818, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=38.1615598885794, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=35.752688172043, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=35.752688172043, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=38.1615598885794, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=38.1615598885794, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=38.1615598885794, Blast_Score=220, Evalue=3e-57, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=35.6200527704486, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI41327771, Length=397, Percent_Identity=35.264483627204, Blast_Score=211, Evalue=7e-55, Organism=Homo sapiens, GI164419743, Length=381, Percent_Identity=35.4330708661417, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI51094101, Length=381, Percent_Identity=35.4330708661417, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI164664518, Length=362, Percent_Identity=31.4917127071823, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=34.7578347578348, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=33.983286908078, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI41327776, Length=362, Percent_Identity=34.5303867403315, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI7661920, Length=360, Percent_Identity=32.2222222222222, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI13514831, Length=380, Percent_Identity=33.4210526315789, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=32.4324324324324, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI4758112, Length=362, Percent_Identity=33.4254143646409, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI18375623, Length=362, Percent_Identity=33.4254143646409, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI21040371, Length=362, Percent_Identity=33.7016574585635, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI188035877, Length=371, Percent_Identity=32.8840970350404, Blast_Score=191, Evalue=8e-49, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=32.425068119891, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI50659095, Length=384, Percent_Identity=33.8541666666667, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI13129006, Length=363, Percent_Identity=33.6088154269972, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI38569503, Length=383, Percent_Identity=31.331592689295, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI38569505, Length=372, Percent_Identity=30.3763440860215, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI17505907, Length=415, Percent_Identity=29.1566265060241, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=30.4239401496259, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI38327634, Length=369, Percent_Identity=33.0623306233062, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=32.1899736147757, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=31.9261213720317, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI256223453, Length=359, Percent_Identity=28.6908077994429, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI164419732, Length=350, Percent_Identity=31.7142857142857, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI41327779, Length=374, Percent_Identity=34.4919786096257, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI62241022, Length=361, Percent_Identity=32.1329639889197, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI154759257, Length=394, Percent_Identity=29.4416243654822, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI62241024, Length=341, Percent_Identity=31.9648093841642, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=29.940119760479, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI256773275, Length=401, Percent_Identity=28.6783042394015, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI9966805, Length=304, Percent_Identity=28.9473684210526, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI20336298, Length=223, Percent_Identity=37.219730941704, Blast_Score=128, Evalue=1e-29, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=39.6782841823056, Blast_Score=271, Evalue=8e-74, Organism=Escherichia coli, GI1788930, Length=385, Percent_Identity=40.7792207792208, Blast_Score=255, Evalue=5e-69, Organism=Escherichia coli, GI87082221, Length=366, Percent_Identity=40.9836065573771, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1790214, Length=411, Percent_Identity=35.7664233576642, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1787605, Length=337, Percent_Identity=40.0593471810089, Blast_Score=233, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17510559, Length=409, Percent_Identity=36.1858190709046, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=36.6120218579235, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI32565321, Length=395, Percent_Identity=36.7088607594937, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI115533224, Length=337, Percent_Identity=40.0593471810089, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI71995718, Length=374, Percent_Identity=36.6310160427808, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17507879, Length=402, Percent_Identity=35.0746268656716, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI86570094, Length=363, Percent_Identity=37.465564738292, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17507877, Length=413, Percent_Identity=33.6561743341404, Blast_Score=214, Evalue=7e-56, Organism=Caenorhabditis elegans, GI17507881, Length=413, Percent_Identity=33.4140435835351, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17552114, Length=366, Percent_Identity=31.4207650273224, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=35.5371900826446, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=35.5371900826446, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=35.5371900826446, Blast_Score=206, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71995724, Length=360, Percent_Identity=33.6111111111111, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17507121, Length=360, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17552642, Length=369, Percent_Identity=32.520325203252, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=30.327868852459, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI71999646, Length=363, Percent_Identity=33.6088154269972, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI71999644, Length=363, Percent_Identity=33.6088154269972, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17507945, Length=389, Percent_Identity=34.1902313624679, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17537549, Length=370, Percent_Identity=35.6756756756757, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71982858, Length=363, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509811, Length=353, Percent_Identity=32.5779036827195, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI115532548, Length=437, Percent_Identity=29.9771167048055, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI71990816, Length=366, Percent_Identity=32.5136612021858, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI115532546, Length=397, Percent_Identity=29.7229219143577, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI193206561, Length=347, Percent_Identity=29.6829971181556, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17505370, Length=348, Percent_Identity=33.3333333333333, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=30.3341902313625, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=28.4210526315789, Blast_Score=161, Evalue=7e-40, Organism=Caenorhabditis elegans, GI32564046, Length=376, Percent_Identity=30.5851063829787, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=32.1052631578947, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17536099, Length=400, Percent_Identity=31.75, Blast_Score=148, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17536101, Length=401, Percent_Identity=31.4214463840399, Blast_Score=147, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17536103, Length=401, Percent_Identity=31.4214463840399, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI71997889, Length=373, Percent_Identity=28.9544235924933, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17553716, Length=364, Percent_Identity=26.3736263736264, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI25148203, Length=421, Percent_Identity=26.3657957244656, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17556951, Length=337, Percent_Identity=30.8605341246291, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI25148291, Length=326, Percent_Identity=26.9938650306748, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=36.4532019704434, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71987152, Length=101, Percent_Identity=34.6534653465347, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6321856, Length=406, Percent_Identity=39.9014778325123, Blast_Score=249, Evalue=5e-67, Organism=Saccharomyces cerevisiae, GI6324778, Length=380, Percent_Identity=37.1052631578947, Blast_Score=249, Evalue=8e-67, Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=37.3684210526316, Blast_Score=243, Evalue=6e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=38.7005649717514, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=37.6404494382022, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=353, Percent_Identity=34.2776203966006, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=343, Percent_Identity=37.3177842565598, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320173, Length=414, Percent_Identity=33.5748792270531, Blast_Score=206, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6324620, Length=371, Percent_Identity=32.8840970350404, Blast_Score=200, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6320224, Length=363, Percent_Identity=31.9559228650138, Blast_Score=199, Evalue=8e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=373, Percent_Identity=33.5120643431635, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=371, Percent_Identity=34.5013477088949, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=32.5905292479109, Blast_Score=186, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=352, Percent_Identity=33.5227272727273, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=32.6086956521739, Blast_Score=180, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6323947, Length=375, Percent_Identity=34.4, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=30.327868852459, Blast_Score=169, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=30.327868852459, Blast_Score=169, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=376, Percent_Identity=31.6489361702128, Blast_Score=166, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=30.0733496332518, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6319714, Length=361, Percent_Identity=29.6398891966759, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=29.923273657289, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=26.9879518072289, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=349, Percent_Identity=28.6532951289398, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6322876, Length=165, Percent_Identity=32.7272727272727, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI21356161, Length=374, Percent_Identity=38.5026737967914, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=38.2857142857143, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI21355075, Length=366, Percent_Identity=37.7049180327869, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI28574962, Length=379, Percent_Identity=36.4116094986807, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=36.4116094986807, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24585582, Length=366, Percent_Identity=37.431693989071, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=34.7826086956522, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI24584994, Length=395, Percent_Identity=35.4430379746835, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24644479, Length=360, Percent_Identity=35.2777777777778, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=34.8901098901099, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=34.8901098901099, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=34.8901098901099, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=34.8901098901099, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI281361218, Length=360, Percent_Identity=35.2777777777778, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24644481, Length=360, Percent_Identity=35.2777777777778, Blast_Score=218, Evalue=9e-57, Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=35.8974358974359, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=32.6869806094183, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=32.6869806094183, Blast_Score=207, Evalue=9e-54, Organism=Drosophila melanogaster, GI18857967, Length=358, Percent_Identity=35.7541899441341, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=33.983286908078, Blast_Score=192, Evalue=3e-49, Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=34.4913151364764, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI17136814, Length=364, Percent_Identity=34.6153846153846, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24645031, Length=360, Percent_Identity=31.6666666666667, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24642822, Length=411, Percent_Identity=33.5766423357664, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=31.3513513513514, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24666101, Length=368, Percent_Identity=30.1630434782609, Blast_Score=181, Evalue=9e-46, Organism=Drosophila melanogaster, GI24582080, Length=366, Percent_Identity=30.327868852459, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582078, Length=366, Percent_Identity=30.327868852459, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136248, Length=366, Percent_Identity=30.327868852459, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582075, Length=366, Percent_Identity=30.327868852459, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571808, Length=371, Percent_Identity=33.1536388140162, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI28571809, Length=371, Percent_Identity=33.1536388140162, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24581954, Length=363, Percent_Identity=32.5068870523416, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24581952, Length=363, Percent_Identity=32.5068870523416, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24581956, Length=363, Percent_Identity=32.5068870523416, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI28571338, Length=446, Percent_Identity=30.9417040358744, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI18859659, Length=446, Percent_Identity=30.9417040358744, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI281365720, Length=321, Percent_Identity=35.8255451713396, Blast_Score=171, Evalue=8e-43, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=34.3406593406593, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI17647335, Length=355, Percent_Identity=30.7042253521127, Blast_Score=158, Evalue=6e-39, Organism=Drosophila melanogaster, GI24668515, Length=338, Percent_Identity=30.7692307692308, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI20130173, Length=429, Percent_Identity=27.972027972028, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI19920478, Length=356, Percent_Identity=28.6516853932584, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI17136666, Length=422, Percent_Identity=27.7251184834123, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24640164, Length=377, Percent_Identity=24.1379310344828, Blast_Score=110, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48690; Mature: 48690
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN CCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCCEEEEEEECCCCCHHHHHHHHHH RLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRK HHCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHEEHEEECCCCHHHHHHHHHH VPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM CCHHEECCCHHHHHHCCCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCEE LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLAN EEEECCCCHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHC ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVAT CCCCEEEEEECHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE DVAARGLDVEGLDMVINFDMPRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVER CHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHH YLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKVAAKGPTKRKTVNR HHHHHHHHHHHHHHHCCCCCCCEEECCCCEECCCCCCCCCCCCHHHCCCCCCCCCHHCCC PKSDLVSQDGMAPLKKRSTPAPAAE CHHHHHCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN CCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCCEEEEEEECCCCCHHHHHHHHHH RLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRK HHCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHEEHEEECCCCHHHHHHHHHH VPDILIGTPGRLLEQLNAGNLDLKHVEVLVLDEADRMLDMGFSEDVERLAGECAGREQTM CCHHEECCCHHHHHHCCCCCCEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCEE LFSATTGGAGLREMIGKVLKDPQHLQVNSVSELASGTRHQIITADHNVHKEQVLNWLLAN EEEECCCCHHHHHHHHHHHCCCCCEECCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHC ETYQKAIIFTNTKAMADRLYGRLVALEYKAFVLHGDKDQKDRKAAIDRLKQGGAKIMVAT CCCCEEEEEECHHHHHHHHHHHHEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE DVAARGLDVEGLDMVINFDMPRSGDDYVHRVGRTGRAGSDGLAISLICHGDWNLMSSVER CHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHH YLKQSFERRVIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKVAAKGPTKRKTVNR HHHHHHHHHHHHHHHCCCCCCCEEECCCCEECCCCCCCCCCCCHHHCCCCCCCCCHHCCC PKSDLVSQDGMAPLKKRSTPAPAAE CHHHHHCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]