| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is apt [H]
Identifier: 66046655
GI number: 66046655
Start: 4090266
End: 4090814
Strand: Direct
Name: apt [H]
Synonym: Psyr_3426
Alternate gene names: 66046655
Gene position: 4090266-4090814 (Clockwise)
Preceding gene: 66046654
Following gene: 161486730
Centisome position: 67.12
GC content: 59.2
Gene sequence:
>549_bases ATGACTTTCGATCAATCGAACTTCAAATCCCTCATCCGCCCGGTCGTGGACTTCCCCAAGCCGGGTGTGGTCTTCCGTGA TATCACGCCCCTCTTCCAATCGCCCAAGGCCACCCGCCAGGTGATTGACAGCTTCGTGCAGCGCTACATCGATGCCGAAT TCAGCCACATCGGCGTGATGGACGCGCGGGGTTTTCTGATCGGTTCGGTGGTCGCGTATCAATTGAACAAGCCGCTGGTG CTGTTCCGCAAACAAGGCAAGCTGCCCGCCGATGTACTGTCCGAGGCGTATCAGACCGAATACGGCGAAGCGTATCTGGA AGTGCATGCCGACAGTCTGTGCGAAGGCGACTCGGTCGTCATGTTCGATGACCTCATCGCGACCGGAGGCACGCTGATCG CCGCCGCCAACCTGATCCGCCGTATGGGTGCCGAAGTGTACGAGGCCGCTGCGATTATCGACCTGCCGGAACTGGGCGGC TCCAAGCGTCTTAACGACCTGAAGATCCCGACGTTCTGCCTGACCGAGTTTGCGCTGGACGAGCAGTAA
Upstream 100 bases:
>100_bases GAGCTGTGTGCGCTGGCTGGCGGGTCGATGCAAAGCTGAAACGTGCGATCTTTGGCGGGTCGGCTTAAACTGTCGGCCAA AACTGCCATGGAACCCCCTG
Downstream 100 bases:
>100_bases CGGCACAGGCACGAGAGTTACAGGTTCCAAACGGTCCAGCGCTCACGGCTATCGTAAATGCGCTTTTTTATCGCGATGGC ACTGACGACGCAGAGTGCGA
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT [H]
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTFDQSNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDAEFSHIGVMDARGFLIGSVVAYQLNKPLV LFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGAEVYEAAAIIDLPELGG SKRLNDLKIPTFCLTEFALDEQ
Sequences:
>Translated_182_residues MTFDQSNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDAEFSHIGVMDARGFLIGSVVAYQLNKPLV LFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGAEVYEAAAIIDLPELGG SKRLNDLKIPTFCLTEFALDEQ >Mature_181_residues TFDQSNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDAEFSHIGVMDARGFLIGSVVAYQLNKPLVL FRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGAEVYEAAAIIDLPELGGS KRLNDLKIPTFCLTEFALDEQ
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis [H]
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4502171, Length=170, Percent_Identity=42.3529411764706, Blast_Score=131, Evalue=4e-31, Organism=Homo sapiens, GI71773201, Length=122, Percent_Identity=45.0819672131148, Blast_Score=102, Evalue=2e-22, Organism=Escherichia coli, GI1786675, Length=170, Percent_Identity=46.4705882352941, Blast_Score=154, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17509087, Length=175, Percent_Identity=41.7142857142857, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6323619, Length=163, Percent_Identity=32.5153374233129, Blast_Score=88, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6320649, Length=162, Percent_Identity=30.8641975308642, Blast_Score=71, Evalue=8e-14, Organism=Drosophila melanogaster, GI17136334, Length=159, Percent_Identity=38.3647798742138, Blast_Score=100, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005764 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.7 [H]
Molecular weight: Translated: 20154; Mature: 20023
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDQSNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDAEFSHIGVM CCCCHHHHHHHHHHHHCCCCCCEEHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCC DARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGDSVV CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEE MFDDLIATGGTLIAAANLIRRMGAEVYEAAAIIDLPELGGSKRLNDLKIPTFCLTEFALD EEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCC EQ CC >Mature Secondary Structure TFDQSNFKSLIRPVVDFPKPGVVFRDITPLFQSPKATRQVIDSFVQRYIDAEFSHIGVM CCCHHHHHHHHHHHHCCCCCCEEHHCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCC DARGFLIGSVVAYQLNKPLVLFRKQGKLPADVLSEAYQTEYGEAYLEVHADSLCEGDSVV CCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEE MFDDLIATGGTLIAAANLIRRMGAEVYEAAAIIDLPELGGSKRLNDLKIPTFCLTEFALD EEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCC EQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA