| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is anr [H]
Identifier: 66046654
GI number: 66046654
Start: 4089470
End: 4090204
Strand: Direct
Name: anr [H]
Synonym: Psyr_3425
Alternate gene names: 66046654
Gene position: 4089470-4090204 (Clockwise)
Preceding gene: 66046652
Following gene: 66046655
Centisome position: 67.11
GC content: 57.01
Gene sequence:
>735_bases ATGTCCGAGCCAGTCAAGTTGCGCGCTCAAACCCAGGCTCACTGCAAGGATTGCAGTCTCGCGCCGTTGTGCCTGCCCCT TTCGTTAAATACCGAAGACATGGACTGCCTTGACCAGATCGTCAAACGCGGCCGGCCACTGAAGAAAGGCGAGTTTCTGT TTCGCCAGGGTGACACCTTCGAGTCGGTCTACGCGGTGCGTTCCGGGGCGTTGAAAACCTTCAATATCAGTGACAGCGGT GAAGAACAACTCACCGGCTTTCACCTGCCCAGCGAACTGGTAGGCATGTCCGGTATGGACGCCGAGGCTTACCCGGTCTC GGCGCAGGCACTGGAAACCACATCGGTCTGCGAAATCCCTTTCGAGCGCCTGGACGAGCTGTCCGTAAGACTGCCGCAAC TGCGTCGGCAGTTGATGCGCGTCATGAGCCGTGAGATCCGTGACGATCAGCAAATGATGCTGCTGCTGTCGAAAAAGACC GCCGATGAGCGTATCGCCACGTTTCTGATCAATCTGTCTGCACGCTTTCGCGCCAGAGGCTTTTCGGCCAATCAGTTCCG CCTGAGCATGTCGCGCAATGAAATCGGTAATCACCTGGGTCTGGCAGTCGAGACGGTGTCCCGTGTATTTACCCGATTCC AGCAAAATCAGCTGATTTCTGCCGAGGGCAAAGAGATACACATCCTCGACCCCATCGAGCTGTGTGCGCTGGCTGGCGGG TCGATGCAAAGCTGA
Upstream 100 bases:
>100_bases CGCAACCTTGACGACGCCGACAGGTTTGCAGGCTGGCCCCGACAAGCCTGGGTGAGTTACCCTTACGGCTTATGTGTGAT TTCCCACAAGGAATTAAGTG
Downstream 100 bases:
>100_bases AACGTGCGATCTTTGGCGGGTCGGCTTAAACTGTCGGCCAAAACTGCCATGGAACCCCCTGATGACTTTCGATCAATCGA ACTTCAAATCCCTCATCCGC
Product: cyclic nucleotide-binding: regulatory protein, Crp
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSEPVKLRAQTQAHCKDCSLAPLCLPLSLNTEDMDCLDQIVKRGRPLKKGEFLFRQGDTFESVYAVRSGALKTFNISDSG EEQLTGFHLPSELVGMSGMDAEAYPVSAQALETTSVCEIPFERLDELSVRLPQLRRQLMRVMSREIRDDQQMMLLLSKKT ADERIATFLINLSARFRARGFSANQFRLSMSRNEIGNHLGLAVETVSRVFTRFQQNQLISAEGKEIHILDPIELCALAGG SMQS
Sequences:
>Translated_244_residues MSEPVKLRAQTQAHCKDCSLAPLCLPLSLNTEDMDCLDQIVKRGRPLKKGEFLFRQGDTFESVYAVRSGALKTFNISDSG EEQLTGFHLPSELVGMSGMDAEAYPVSAQALETTSVCEIPFERLDELSVRLPQLRRQLMRVMSREIRDDQQMMLLLSKKT ADERIATFLINLSARFRARGFSANQFRLSMSRNEIGNHLGLAVETVSRVFTRFQQNQLISAEGKEIHILDPIELCALAGG SMQS >Mature_243_residues SEPVKLRAQTQAHCKDCSLAPLCLPLSLNTEDMDCLDQIVKRGRPLKKGEFLFRQGDTFESVYAVRSGALKTFNISDSGE EQLTGFHLPSELVGMSGMDAEAYPVSAQALETTSVCEIPFERLDELSVRLPQLRRQLMRVMSREIRDDQQMMLLLSKKTA DERIATFLINLSARFRARGFSANQFRLSMSRNEIGNHLGLAVETVSRVFTRFQQNQLISAEGKEIHILDPIELCALAGGS MQS
Specific function: Transcriptional activator of anaerobic gene expression [H]
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH crp-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787595, Length=226, Percent_Identity=52.6548672566372, Blast_Score=265, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR000595 - InterPro: IPR001808 - InterPro: IPR012318 - InterPro: IPR014710 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]
EC number: NA
Molecular weight: Translated: 27345; Mature: 27214
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVKLRAQTQAHCKDCSLAPLCLPLSLNTEDMDCLDQIVKRGRPLKKGEFLFRQGDTF CCCCCEECCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCH ESVYAVRSGALKTFNISDSGEEQLTGFHLPSELVGMSGMDAEAYPVSAQALETTSVCEIP HHHHHHHHCCEEEEECCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCHHHHCC FERLDELSVRLPQLRRQLMRVMSREIRDDQQMMLLLSKKTADERIATFLINLSARFRARG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC FSANQFRLSMSRNEIGNHLGLAVETVSRVFTRFQQNQLISAEGKEIHILDPIELCALAGG CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEECHHHHHHHCCC SMQS CCCC >Mature Secondary Structure SEPVKLRAQTQAHCKDCSLAPLCLPLSLNTEDMDCLDQIVKRGRPLKKGEFLFRQGDTF CCCCEECCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEECCCCH ESVYAVRSGALKTFNISDSGEEQLTGFHLPSELVGMSGMDAEAYPVSAQALETTSVCEIP HHHHHHHHCCEEEEECCCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCHHHHCC FERLDELSVRLPQLRRQLMRVMSREIRDDQQMMLLLSKKTADERIATFLINLSARFRARG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC FSANQFRLSMSRNEIGNHLGLAVETVSRVFTRFQQNQLISAEGKEIHILDPIELCALAGG CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEECHHHHHHHCCC SMQS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1787797; 1787798; 10984043 [H]