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The map label for this gene is slyA [H]

Identifier: 66046606

GI number: 66046606

Start: 4036226

End: 4036678

Strand: Direct

Name: slyA [H]

Synonym: Psyr_3377

Alternate gene names: 66046606

Gene position: 4036226-4036678 (Clockwise)

Preceding gene: 66046604

Following gene: 66046607

Centisome position: 66.24

GC content: 62.25

Gene sequence:

>453_bases
ATGTCTGTCGAAGCCTTGCATCGGACAATCAGCAGTGGTCTGGTGGCCGCGTCTCGCCAATGGCGACGCATCTGCCAGAA
CACGCTGGTGACCTATGGCATTTCCGAAGCCTGCGCAGGTCCGTTGCTGGCCATCGCACGTCTGGGCGATGGCGCACATC
AGGTGAAAGTCGCCCAGGCGGCCGGCATGGAAAGCCCGACGCTGGTGCGTCTGCTTGATCAGTTGTGCAAGGCTGACATC
GTTTGCCGCACTGAAGACCCGAATGACCGCCGCGCAAAGGCCTTGAGCCTGACGCGCAAAGGTCGCGAACTGGCCTGTTC
GATCGAAGCCGAACTGACTCGCTTGCGCGCCGAAGTGCTGCAAGGGCTGCAACCTGCCGATCTGGAAGCCACGTTACGGG
TGTTACAGGCGTTTGCCGATGCGGCGCAGCGCGAACACGGGGGCCAGGCTTGA

Upstream 100 bases:

>100_bases
CTGCGGGTTGACTGTAAGCAGTTGTTACGAGATATTAGTTAGCAAGCTATTTATCTCCCTGCTAACAATATCGCTCCTAA
CTAAATTCCTGGTGTTTTCC

Downstream 100 bases:

>100_bases
ACGGATTTTTCTCCAGCGTTCCACCTGCACGCGACTGGTTCTACGGTGTGCGCACCTTCGGCGCATCAATGCTGGCGCTG
TACATCGCATTGTTGATGGA

Product: regulatory protein, MarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSVEALHRTISSGLVAASRQWRRICQNTLVTYGISEACAGPLLAIARLGDGAHQVKVAQAAGMESPTLVRLLDQLCKADI
VCRTEDPNDRRAKALSLTRKGRELACSIEAELTRLRAEVLQGLQPADLEATLRVLQAFADAAQREHGGQA

Sequences:

>Translated_150_residues
MSVEALHRTISSGLVAASRQWRRICQNTLVTYGISEACAGPLLAIARLGDGAHQVKVAQAAGMESPTLVRLLDQLCKADI
VCRTEDPNDRRAKALSLTRKGRELACSIEAELTRLRAEVLQGLQPADLEATLRVLQAFADAAQREHGGQA
>Mature_149_residues
SVEALHRTISSGLVAASRQWRRICQNTLVTYGISEACAGPLLAIARLGDGAHQVKVAQAAGMESPTLVRLLDQLCKADIV
CRTEDPNDRRAKALSLTRKGRELACSIEAELTRLRAEVLQGLQPADLEATLRVLQAFADAAQREHGGQA

Specific function: Transcription regulator that can both activate or repress expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081950, Length=126, Percent_Identity=32.5396825396825, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023071
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16171; Mature: 16040

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEALHRTISSGLVAASRQWRRICQNTLVTYGISEACAGPLLAIARLGDGAHQVKVAQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHH
AGMESPTLVRLLDQLCKADIVCRTEDPNDRRAKALSLTRKGRELACSIEAELTRLRAEVL
CCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
QGLQPADLEATLRVLQAFADAAQREHGGQA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVEALHRTISSGLVAASRQWRRICQNTLVTYGISEACAGPLLAIARLGDGAHQVKVAQA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHH
AGMESPTLVRLLDQLCKADIVCRTEDPNDRRAKALSLTRKGRELACSIEAELTRLRAEVL
CCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
QGLQPADLEATLRVLQAFADAAQREHGGQA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA