| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is czcS [H]
Identifier: 66046604
GI number: 66046604
Start: 4033610
End: 4034998
Strand: Direct
Name: czcS [H]
Synonym: Psyr_3375
Alternate gene names: 66046604
Gene position: 4033610-4034998 (Clockwise)
Preceding gene: 66046603
Following gene: 66046606
Centisome position: 66.19
GC content: 62.56
Gene sequence:
>1389_bases ATGCGACGCCAGCCTTCCCTGACCCTGCGCTCGACCCTGGCCTTTGCCCTGGTGGCGATGCTCACCGTCAGCGGCGCAGG CCTGTACCTGTATCAGTCAATCGAAGAAACGGTCATGCAGCGCAGCGACCATGCCGTGCTCGCGCGGCTGGACCACTTTC GCAAGCTGTTGCGCTATGACCTGACCATGGGCAACCTCAAGGGCAGCCCGCAGCTGTTCGAGAACATGCTCGACAGCGAA GAAGACATCTTCATCATCGGCGAGCCGGGCAAGTCACCGGTCATCTCGGTCAATCCGCAGCACGCGCCCCTGCCGGAGCT GCCGACCGTGGCGCAGGACCAACCGCTGCGGGTCGATGACCTGCGCAGCGGCATGAGCCTGCAAGGCGTGCCGTTGCGCG CTGCCGCCGTCCAGGTGATGTCCAACGGTGTCGAAGTGCGCTTGCAGGCTGCGCACCTGATGGTCAAGGAAATGGCCATG CTCGCCAGTTTCCGTCAGCGTATCTATATAGCTGTGGCCCTGGCGTTTCTGATCACCGCAGCCCTGGGTTATGTGCTGCT GCGCCGCGGCTTGCGTCCACTGCGCAGAATGGCCGCCCACGCTGCCGCCATCACCCCGGCCAGCCTGCACAAACGCCTCG ACAGCCGCGATACACCCGTCGAGCTGCAACAACTGAGCGATGCCTTCAACGCCATGCTTGACCGTCTGGACGATGGCTAC CGGCGCCTGATGCAGTTTTCTGCCGATCTGGCCCATGAAATCCGCACACCGGTCGGCTCACTGATGGGCCATTGTCAGGT CGCCTTGCGCCAGAACCGCAGCGCCGATGAATATCAGGCGCTGCTGGCCTCCAATCTGGAAGAGCTGGAACGCATCTCGC GGCTGGTGGAAAGCATTCTGTTTCTGGCACGGGCGGACGAAGCCCAGGCCGCGCTGGAACGTCAGGCGCTGGATATGCAT GACGAACTGCAACGGGTCGCCGGCTATTTCGAGGGGCTGGCCGAAGAACGCAACCTGACCCTGAGCACCCACGGACAAGG CACGCTGCTGGCCGATCCGATTTTGCTGCGGCGTGCATTGAGCAATCTGGTCGCCAATGCGATTCGCTACGCTGATGAAG ACAGCGAGATTCTGATGCGAGTGACGGCTGTGGACAGGCACTGGAAGATCGATGTGGAGAATCAGGGACCGGTGCTGCCG GAGGCCACCCTCGCACGCTTGTTCGATCGTTTCTATCGCGGTGACGCCTCACGCCATGAGCGCTCGGATTCCAACGGCCT GGGGCTGGCGATCGTCACGGCAATCATGCAACTGCACGGCGGTCGGGTCGAAGTCGCTCAACCCGCCGTCGGCAGAATCT GCTTCAGTCTGATATTCCCAGCGGCCTGA
Upstream 100 bases:
>100_bases ACGTCGCCATCAAGCGCCTGCGCAGCAAGGTCGACCTGCCCTACCCGGTCAAGCTCATCCACACCGTGCGTGGCATCGGT TATGTGTGCGAGGTGCGGCC
Downstream 100 bases:
>100_bases AGCCTGCAGTGCGCAAGGATCAATTCTTTTTCTCGTGGGCAATGGCCAGCTTGTAGAACGTGGCCGAGCCGCCTTCCGTG GTGTAGCCGGTATTGTCCTG
Product: heavy metal sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MRRQPSLTLRSTLAFALVAMLTVSGAGLYLYQSIEETVMQRSDHAVLARLDHFRKLLRYDLTMGNLKGSPQLFENMLDSE EDIFIIGEPGKSPVISVNPQHAPLPELPTVAQDQPLRVDDLRSGMSLQGVPLRAAAVQVMSNGVEVRLQAAHLMVKEMAM LASFRQRIYIAVALAFLITAALGYVLLRRGLRPLRRMAAHAAAITPASLHKRLDSRDTPVELQQLSDAFNAMLDRLDDGY RRLMQFSADLAHEIRTPVGSLMGHCQVALRQNRSADEYQALLASNLEELERISRLVESILFLARADEAQAALERQALDMH DELQRVAGYFEGLAEERNLTLSTHGQGTLLADPILLRRALSNLVANAIRYADEDSEILMRVTAVDRHWKIDVENQGPVLP EATLARLFDRFYRGDASRHERSDSNGLGLAIVTAIMQLHGGRVEVAQPAVGRICFSLIFPAA
Sequences:
>Translated_462_residues MRRQPSLTLRSTLAFALVAMLTVSGAGLYLYQSIEETVMQRSDHAVLARLDHFRKLLRYDLTMGNLKGSPQLFENMLDSE EDIFIIGEPGKSPVISVNPQHAPLPELPTVAQDQPLRVDDLRSGMSLQGVPLRAAAVQVMSNGVEVRLQAAHLMVKEMAM LASFRQRIYIAVALAFLITAALGYVLLRRGLRPLRRMAAHAAAITPASLHKRLDSRDTPVELQQLSDAFNAMLDRLDDGY RRLMQFSADLAHEIRTPVGSLMGHCQVALRQNRSADEYQALLASNLEELERISRLVESILFLARADEAQAALERQALDMH DELQRVAGYFEGLAEERNLTLSTHGQGTLLADPILLRRALSNLVANAIRYADEDSEILMRVTAVDRHWKIDVENQGPVLP EATLARLFDRFYRGDASRHERSDSNGLGLAIVTAIMQLHGGRVEVAQPAVGRICFSLIFPAA >Mature_462_residues MRRQPSLTLRSTLAFALVAMLTVSGAGLYLYQSIEETVMQRSDHAVLARLDHFRKLLRYDLTMGNLKGSPQLFENMLDSE EDIFIIGEPGKSPVISVNPQHAPLPELPTVAQDQPLRVDDLRSGMSLQGVPLRAAAVQVMSNGVEVRLQAAHLMVKEMAM LASFRQRIYIAVALAFLITAALGYVLLRRGLRPLRRMAAHAAAITPASLHKRLDSRDTPVELQQLSDAFNAMLDRLDDGY RRLMQFSADLAHEIRTPVGSLMGHCQVALRQNRSADEYQALLASNLEELERISRLVESILFLARADEAQAALERQALDMH DELQRVAGYFEGLAEERNLTLSTHGQGTLLADPILLRRALSNLVANAIRYADEDSEILMRVTAVDRHWKIDVENQGPVLP EATLARLFDRFYRGDASRHERSDSNGLGLAIVTAIMQLHGGRVEVAQPAVGRICFSLIFPAA
Specific function: Member of the two-component regulatory system CzcS/CzcR involved in the control of cobalt, zinc and cadmium homeostasis. Probably activates CzcR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=347, Percent_Identity=38.328530259366, Blast_Score=224, Evalue=7e-60, Organism=Escherichia coli, GI1788279, Length=424, Percent_Identity=33.4905660377358, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1788393, Length=275, Percent_Identity=26.9090909090909, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786600, Length=224, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI1787894, Length=293, Percent_Identity=27.9863481228669, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1790861, Length=299, Percent_Identity=27.0903010033445, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786912, Length=216, Percent_Identity=30.5555555555556, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790346, Length=276, Percent_Identity=27.8985507246377, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790551, Length=281, Percent_Identity=29.1814946619217, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1789403, Length=304, Percent_Identity=30.9210526315789, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789149, Length=221, Percent_Identity=25.3393665158371, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87082128, Length=250, Percent_Identity=24.8, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081816, Length=229, Percent_Identity=27.9475982532751, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI145693157, Length=211, Percent_Identity=23.696682464455, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788549, Length=234, Percent_Identity=26.4957264957265, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=26.6968325791855, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788713, Length=225, Percent_Identity=24.4444444444444, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1789808, Length=297, Percent_Identity=26.9360269360269, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787374, Length=333, Percent_Identity=24.9249249249249, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR006290 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51323; Mature: 51323
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQPSLTLRSTLAFALVAMLTVSGAGLYLYQSIEETVMQRSDHAVLARLDHFRKLLRYD CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LTMGNLKGSPQLFENMLDSEEDIFIIGEPGKSPVISVNPQHAPLPELPTVAQDQPLRVDD CHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH LRSGMSLQGVPLRAAAVQVMSNGVEVRLQAAHLMVKEMAMLASFRQRIYIAVALAFLITA HHCCCCCCCCCHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGYVLLRRGLRPLRRMAAHAAAITPASLHKRLDSRDTPVELQQLSDAFNAMLDRLDDGY HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RRLMQFSADLAHEIRTPVGSLMGHCQVALRQNRSADEYQALLASNLEELERISRLVESIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH FLARADEAQAALERQALDMHDELQRVAGYFEGLAEERNLTLSTHGQGTLLADPILLRRAL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH SNLVANAIRYADEDSEILMRVTAVDRHWKIDVENQGPVLPEATLARLFDRFYRGDASRHE HHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHC RSDSNGLGLAIVTAIMQLHGGRVEVAQPAVGRICFSLIFPAA CCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCC >Mature Secondary Structure MRRQPSLTLRSTLAFALVAMLTVSGAGLYLYQSIEETVMQRSDHAVLARLDHFRKLLRYD CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LTMGNLKGSPQLFENMLDSEEDIFIIGEPGKSPVISVNPQHAPLPELPTVAQDQPLRVDD CHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH LRSGMSLQGVPLRAAAVQVMSNGVEVRLQAAHLMVKEMAMLASFRQRIYIAVALAFLITA HHCCCCCCCCCHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGYVLLRRGLRPLRRMAAHAAAITPASLHKRLDSRDTPVELQQLSDAFNAMLDRLDDGY HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RRLMQFSADLAHEIRTPVGSLMGHCQVALRQNRSADEYQALLASNLEELERISRLVESIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH FLARADEAQAALERQALDMHDELQRVAGYFEGLAEERNLTLSTHGQGTLLADPILLRRAL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH SNLVANAIRYADEDSEILMRVTAVDRHWKIDVENQGPVLPEATLARLFDRFYRGDASRHE HHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHC RSDSNGLGLAIVTAIMQLHGGRVEVAQPAVGRICFSLIFPAA CCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9044283 [H]