Click here to switch to the map view.

The map label for this gene is 66046527

Identifier: 66046527

GI number: 66046527

Start: 3947103

End: 3947534

Strand: Direct

Name: 66046527

Synonym: Psyr_3298

Alternate gene names: NA

Gene position: 3947103-3947534 (Clockwise)

Preceding gene: 66046524

Following gene: 66046528

Centisome position: 64.77

GC content: 57.64

Gene sequence:

>432_bases
ATGCTGAGCCACAACGATTGGCAGCACAAGCACGACGAGTTCCTGAACCTGTCTCAGGCACTTTTGCACAAGTCGGAAGA
ATGTCTTTCGCATCTGGAGCTGATCCCCAACGATGAGGACGCTACCGGCTGCCTGCTGACAACCCTGCGCAAGCTTGCGC
AGGAGGCAGAAGCCGTTCCTGTGCCGTGCATTGCCGATTTTTCCCGCCAGTTGTGTCAACTGTTGAAAACCGGCAGCCAG
GCCAGCGAGCTTTCCCAGGAAGCCGTGCTGGCAGTCAAGAACTGCCTGACACTGATGTACTGGCAAGTCGAACTTCTCGA
TCCGCACACCGGCGAGTTGACGATGGACGACCACGAACAGCTCGAGCTGCTGGAAAAACTGGCCAGCGTCTCCGCGCAAT
CGGCCTCGCCGAAAGATGCGACCCGCCAATAA

Upstream 100 bases:

>100_bases
ATTCAGAAACGCCCTACATACTTTTGTTTGAAATCGACATTAACTGTCAGCCATTCGCCGCGGGCGGAAGTTCGCTATCC
ATGATCAGTGGAGACAAAGG

Downstream 100 bases:

>100_bases
CACTCGATAACGCCCGGCCGTTGAGCATCGCATCGCGATGTCATTGAGGCAGCGTTGTCACGTCAGCATTTTCCGTTCAT
TGTCTTCACTGCCGCTAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLSHNDWQHKHDEFLNLSQALLHKSEECLSHLELIPNDEDATGCLLTTLRKLAQEAEAVPVPCIADFSRQLCQLLKTGSQ
ASELSQEAVLAVKNCLTLMYWQVELLDPHTGELTMDDHEQLELLEKLASVSAQSASPKDATRQ

Sequences:

>Translated_143_residues
MLSHNDWQHKHDEFLNLSQALLHKSEECLSHLELIPNDEDATGCLLTTLRKLAQEAEAVPVPCIADFSRQLCQLLKTGSQ
ASELSQEAVLAVKNCLTLMYWQVELLDPHTGELTMDDHEQLELLEKLASVSAQSASPKDATRQ
>Mature_143_residues
MLSHNDWQHKHDEFLNLSQALLHKSEECLSHLELIPNDEDATGCLLTTLRKLAQEAEAVPVPCIADFSRQLCQLLKTGSQ
ASELSQEAVLAVKNCLTLMYWQVELLDPHTGELTMDDHEQLELLEKLASVSAQSASPKDATRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15990; Mature: 15990

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHNDWQHKHDEFLNLSQALLHKSEECLSHLELIPNDEDATGCLLTTLRKLAQEAEAVP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
VPCIADFSRQLCQLLKTGSQASELSQEAVLAVKNCLTLMYWQVELLDPHTGELTMDDHEQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LELLEKLASVSAQSASPKDATRQ
HHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLSHNDWQHKHDEFLNLSQALLHKSEECLSHLELIPNDEDATGCLLTTLRKLAQEAEAVP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
VPCIADFSRQLCQLLKTGSQASELSQEAVLAVKNCLTLMYWQVELLDPHTGELTMDDHEQ
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LELLEKLASVSAQSASPKDATRQ
HHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA