Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is mocC [H]

Identifier: 66046502

GI number: 66046502

Start: 3919748

End: 3920653

Strand: Reverse

Name: mocC [H]

Synonym: Psyr_3273

Alternate gene names: 66046502

Gene position: 3920653-3919748 (Counterclockwise)

Preceding gene: 66046503

Following gene: 66046501

Centisome position: 64.34

GC content: 60.49

Gene sequence:

>906_bases
ATGCCCGTTTCGACTTCCACACCCAGAATCCGCATCGGCATCAATCCGATCTCCTGGAGCAACGATGATTTGCCGGCCCT
TGGCGGAGAAACCCCGTTGAGCACGGCGCTCAGCGAAGGCAAAGCCATTGGTTACGAGGGCTTCGAGCTCAACGGCAAGT
TTCCGAAAGATGCCAAGGGTGTCGGCGATGTATTGCGGCCCCATGATCTGGCGTTGGTGTCCGGCTGGTACTCCAGCCGT
CTGGCGCGGCGTTCGGTGGCCGAGGAAATCGAAGCCATCACCCCACATGTGCAGCTGCTCGCCGAAAATGGCGCTTCGGT
GCTGGTGTATGGCGAAGTGGCCGACTCGATTCAGGGGCAGCGTATCCCGCTGGTCGAACGACCGCGTTTTCACACCGATG
CCGCCTGGCATGAGTACGCCGAAAAACTCACCGAGCTGGCACGTTTTACCCTGTCCCGCGGCGTGCGTCTGGCGTATCAC
CACCACATGGGCGCTTATGTCGAGTCGCCGCAGGATATCGACCGGCTGATGGCACTGACCGGTGAGGAAGTCGGCCTGCT
GTTCGATTCCGGGCATTGCTACATGGGCGGTGGCGAACCTCTTCAGGTGTTGAGCAAGCACATCCAGCGTATCTGTCATG
TGCATTTCAAGGACGTGCGCAAGCCGGTGGTGCAACTGGCGCGCAACAATCTGTGGAGCTTTCCCGACTGCATCATCAAC
GGCACCTTCACGGTGCCGGGCGATGGCGACATCGACTTCTCGGCGCTGCTCAAGGTGTTGCTGCAGGCCGATTACCGCGG
CTGGCTGGTGGTCGAGGCCGAACAGGACCCAGCGGTAGCGCCGAGCTATGTGTACGCCAAAAAGGGCTATGACACGTTGC
GCCAACTGCTGGCCGATGCACGCTAA

Upstream 100 bases:

>100_bases
TTCAACTGGTTGATCGAGTCCTGGCGCGAAAGCCGCGCCTGATTGGTTCCGGATTTCGACGCCACAACAACGTCGCGATA
ACAACAAAAAAGGTGCAGCC

Downstream 100 bases:

>100_bases
GGAGGAATGAAACATGAATCTGCTGACCAAGAGCAAATCCACTGGCCGCGACGTCGTAGCGCTGGCCCCCGGTTCGCTGG
AATACGTGAACTTCGCCGCC

Product: AP endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKGVGDVLRPHDLALVSGWYSSR
LARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQRIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYH
HHMGAYVESPQDIDRLMALTGEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIIN
GTFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADAR

Sequences:

>Translated_301_residues
MPVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKGVGDVLRPHDLALVSGWYSSR
LARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQRIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYH
HHMGAYVESPQDIDRLMALTGEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIIN
GTFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADAR
>Mature_300_residues
PVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKGVGDVLRPHDLALVSGWYSSRL
ARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQRIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYHH
HMGAYVESPQDIDRLMALTGEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIING
TFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADAR

Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iolE/mocC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 33241; Mature: 33110

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKG
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCEEECCCCCCCCCC
VGDVLRPHDLALVSGWYSSRLARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQ
HHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCHHHCCCCC
RIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYHHHMGAYVESPQDIDRLMALT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHHHHHHC
GEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIIN
CCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE
GTFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADA
CCEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHCC
R
C
>Mature Secondary Structure 
PVSTSTPRIRIGINPISWSNDDLPALGGETPLSTALSEGKAIGYEGFELNGKFPKDAKG
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCEEECCCCCCCCCC
VGDVLRPHDLALVSGWYSSRLARRSVAEEIEAITPHVQLLAENGASVLVYGEVADSIQGQ
HHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCHHHCCCCC
RIPLVERPRFHTDAAWHEYAEKLTELARFTLSRGVRLAYHHHMGAYVESPQDIDRLMALT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCHHHHHHHHHHC
GEEVGLLFDSGHCYMGGGEPLQVLSKHIQRICHVHFKDVRKPVVQLARNNLWSFPDCIIN
CCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEE
GTFTVPGDGDIDFSALLKVLLQADYRGWLVVEAEQDPAVAPSYVYAKKGYDTLRQLLADA
CCEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]