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The map label for this gene is iolB [H]

Identifier: 66046501

GI number: 66046501

Start: 3918925

End: 3919734

Strand: Reverse

Name: iolB [H]

Synonym: Psyr_3272

Alternate gene names: 66046501

Gene position: 3919734-3918925 (Counterclockwise)

Preceding gene: 66046502

Following gene: 66046500

Centisome position: 64.32

GC content: 62.47

Gene sequence:

>810_bases
ATGAATCTGCTGACCAAGAGCAAATCCACTGGCCGCGACGTCGTAGCGCTGGCCCCCGGTTCGCTGGAATACGTGAACTT
CGCCGCCTACCGCCTGGAGTCCGGAGAAAGCCTGCCGCTGAGCGCAGGCGAAAACGAGCTGTGCGTGGTCCTGCTGACCG
GGCACGCCAGCGTCAGTGGCGAAGCGCCTGGGCAGGGCGCTTTCAACTGGGAAAACATCGGCGACCGGCAATCGGTGTTT
GAAGAAAAATCGCCATTCGCGGTCTACCTGCCGCCGCATAGCCAGGCGCAGTTTGTCGCGCGCGGCGCGGTGCAGCTTGC
CGTATGCACGGCGCCGGGCGATGCCGGCAAACATTTTCCGGCACGCTTGATCATGCCGGGCAGCATGAAGCGCAGCGTAC
GCGGCAAGGGCGCCAATACCCGTTATGTGTGCGACATATTGCCGGACAGCGAAGCGGCGCATTCGCTGCTGGTGGTCGAG
GTGCGTACACCTTCCGGGCATTCCTCCAGTTACCCGCCGCACAAGCATGACCGGGACAACCTGCCGCACGAGAGCTTCCT
CGAAGAAACCTACTACCACCAGGTCAACCCGCCGCAGGGCTTCGTTTTTCAACGGGTCTACACCGACGACCGCAGCATCG
ATCAGGCCATGGCCGTGGAAAACAATGACCTGGTGACCGTGCCCAAGGGCTACCACCCGGTCTCCGTCCCCTATGGCTAC
GAATCCTGGTACCTGAATGTAATGGCCGGCCCGACGCGCGCCTGGCAGTTCCACAACGATCCGCAGCACAGCTGGCTGCT
GGATCTCTGA

Upstream 100 bases:

>100_bases
GAACAGGACCCAGCGGTAGCGCCGAGCTATGTGTACGCCAAAAAGGGCTATGACACGTTGCGCCAACTGCTGGCCGATGC
ACGCTAAGGAGGAATGAAAC

Downstream 100 bases:

>100_bases
TTTCCCATTTTTGTTCTGGAGGCATGAGATGAACGAGTCACCGGTGATCGGCCACTACATCAACGGACACCTGAGCAATG
GCGAAGGTGAGCGTTACAGC

Product: myo-inositol catabolism IolB

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNLLTKSKSTGRDVVALAPGSLEYVNFAAYRLESGESLPLSAGENELCVVLLTGHASVSGEAPGQGAFNWENIGDRQSVF
EEKSPFAVYLPPHSQAQFVARGAVQLAVCTAPGDAGKHFPARLIMPGSMKRSVRGKGANTRYVCDILPDSEAAHSLLVVE
VRTPSGHSSSYPPHKHDRDNLPHESFLEETYYHQVNPPQGFVFQRVYTDDRSIDQAMAVENNDLVTVPKGYHPVSVPYGY
ESWYLNVMAGPTRAWQFHNDPQHSWLLDL

Sequences:

>Translated_269_residues
MNLLTKSKSTGRDVVALAPGSLEYVNFAAYRLESGESLPLSAGENELCVVLLTGHASVSGEAPGQGAFNWENIGDRQSVF
EEKSPFAVYLPPHSQAQFVARGAVQLAVCTAPGDAGKHFPARLIMPGSMKRSVRGKGANTRYVCDILPDSEAAHSLLVVE
VRTPSGHSSSYPPHKHDRDNLPHESFLEETYYHQVNPPQGFVFQRVYTDDRSIDQAMAVENNDLVTVPKGYHPVSVPYGY
ESWYLNVMAGPTRAWQFHNDPQHSWLLDL
>Mature_269_residues
MNLLTKSKSTGRDVVALAPGSLEYVNFAAYRLESGESLPLSAGENELCVVLLTGHASVSGEAPGQGAFNWENIGDRQSVF
EEKSPFAVYLPPHSQAQFVARGAVQLAVCTAPGDAGKHFPARLIMPGSMKRSVRGKGANTRYVCDILPDSEAAHSLLVVE
VRTPSGHSSSYPPHKHDRDNLPHESFLEETYYHQVNPPQGFVFQRVYTDDRSIDQAMAVENNDLVTVPKGYHPVSVPYGY
ESWYLNVMAGPTRAWQFHNDPQHSWLLDL

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 29650; Mature: 29650

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLTKSKSTGRDVVALAPGSLEYVNFAAYRLESGESLPLSAGENELCVVLLTGHASVSG
CCCCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCC
EAPGQGAFNWENIGDRQSVFEEKSPFAVYLPPHSQAQFVARGAVQLAVCTAPGDAGKHFP
CCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHEECCEEEEEEEECCCCCCCCCC
ARLIMPGSMKRSVRGKGANTRYVCDILPDSEAAHSLLVVEVRTPSGHSSSYPPHKHDRDN
EEEECCCCHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
LPHESFLEETYYHQVNPPQGFVFQRVYTDDRSIDQAMAVENNDLVTVPKGYHPVSVPYGY
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHEECCCCEEECCCCCCCCCCCCCC
ESWYLNVMAGPTRAWQFHNDPQHSWLLDL
CCEEEEEEECCCEEEECCCCCCCCEEECC
>Mature Secondary Structure
MNLLTKSKSTGRDVVALAPGSLEYVNFAAYRLESGESLPLSAGENELCVVLLTGHASVSG
CCCCCCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCC
EAPGQGAFNWENIGDRQSVFEEKSPFAVYLPPHSQAQFVARGAVQLAVCTAPGDAGKHFP
CCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCHHHEECCEEEEEEEECCCCCCCCCC
ARLIMPGSMKRSVRGKGANTRYVCDILPDSEAAHSLLVVEVRTPSGHSSSYPPHKHDRDN
EEEECCCCHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
LPHESFLEETYYHQVNPPQGFVFQRVYTDDRSIDQAMAVENNDLVTVPKGYHPVSVPYGY
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHEECCCCEEECCCCCCCCCCCCCC
ESWYLNVMAGPTRAWQFHNDPQHSWLLDL
CCEEEEEEECCCEEEECCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA