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The map label for this gene is iolC1 [H]

Identifier: 66046503

GI number: 66046503

Start: 3920712

End: 3922649

Strand: Reverse

Name: iolC1 [H]

Synonym: Psyr_3274

Alternate gene names: 66046503

Gene position: 3922649-3920712 (Counterclockwise)

Preceding gene: 66046505

Following gene: 66046502

Centisome position: 64.37

GC content: 62.9

Gene sequence:

>1938_bases
ATGGGCCAGACACGCTTTGCCACTGGGCGTCAGTTGGATCTGATTTGCCTCGGACGCCTGGGCGTCGACCTTTATGCGCA
GCAAGTGGGGGCGCTGCTGGAAGACGTTTCCAGTTTCGCCAAGTACCTGGGCGGCTCGTCGGCCAATATTGCCTTCGGCA
CCGCCAGGCTCGGGCTCAGGTCGGCCATGCTGAGCAGGGTCGGCGATGATCATATGGGCCGCTTTCTGGTCGAATCCCTG
GCCCGCGAAGGATGTGATGTCAGTGCGATCAAGCGCGACCCCGAGCGCCTGACGGCGATGGTGCTGCTGGGGCTGAAGGA
TCGTGAAACCTTCCCCTTGGTGTTCTACCGTGAAAACTGCGCTGACATGGCCCTGCGCGCCGAGGATATCGACGAACAGC
AGATTGCATCCAGCAAGGCGCTGTTGATCACCGGCACGCATTTCTCCACTGATCAGGTGTTCAAGGCCAGCAGCCAGGCG
CTCGACTATGCCAAGAAGCATGACGTCAAACGCGTGCTGGACATCGACTACCGCCCGGTGCTCTGGGGGCTGGCAGGCAA
GGCCGATGGCGAGACCCGGTTCGTTGCCGATCAGAAGGTCAGCCAGCATGTACAACGCATCCTGCCGCGTTTCGATCTGA
TCGTCGGCACTGAAGAAGAATTCCAGATTGCCGGCGGTGCCACCGATTTGCTCGCGGCCCTGCGCAGGGTGCGTGAACTG
ACGGCCGCAACGCTGGTGGTCAAGCTCGGCCCGCAAGGCTGCACGGTGATTCACGGGGCCATTCCCGCGCGGCTGGAAGA
GGGCGCTATCTATCCCGGCGTGCAGGTCGAAGTGCTCAACGTGCTCGGTGCGGGCGATGCGTTCATGTCCGGTTTTCTCA
GCGGCTGGCTCAAGGAGGCCAGTGACGAACGCTGCTGCCAGCTGGCCAATGCCTGTGGCGGGCTGGTGGTGTCGCGTCAC
GCCTGCGCGCCTGCGATGCCGACCCCGGCCGAACTCGATTACCTGTTCAACAGCCCGCAACCCATCACCCGCCCTGATCA
GGATGTCGCCCTGCAACGGCTGCATCAGGTCAGCGTGCCGCGCAAGCAGTGGCGGCAGTTGTTCATCTTCGCCTTCGATC
ATCGCGGCCAGTTGGTCGAACTGGCGCAACAGGCCGGGCGTGATCTGGGCAGCATCAGCCAGCTCAAGCAGTTGTTCGTG
CAAGCGGTCGAGCGGGTCGAAGCCGACCTGCGCAAGCGCGGTATCGAGGCCGATGTCGGTCTGCTTGCCGACCAGCGCTT
CGGTCAGGATTCACTCAACGCCGCAACCGGTCGCGGCTGGTGGGTAGCGCGTCCGGTGGAAGTACAGGGCTCAAGGCCGC
TGGCCTTCGAGCACGGTCGCTCCATCGGTAGCAATCTGCTCGCCTGGCCGCAAGAGCAGATCATCAAGTGCCTGGTGCAA
TATCACCCCGATGACGAGCCGATGCTGCGCCTGGAGCAGGAAGCGCAGATCAAGGCGCTCTACGACGCTTCGAAAGTCAG
CGGCCATGAGTTGCTGCTGGAAATCATTCCGCCCAAGGATCACCCGTCGCCTCACCCGGACGTGATGCTTCGCTCGCTGA
AGCGCTTGTACAACCTGGGCATCTACCCGGCGTGGTGGAAGATCGAGGCGCAGAGCGCGCAGGTCTGGCAGCAACTGGAC
GAACTGATCCAGCAACGCGATCCGTATTGCCGCGGTGTGGTACTGCTCGGGCTCAATGCGCCTGTCGAAGACCTCGCCGC
CGGCTTTGCCGAAGCACGCCACAGCCGCGTCTGCCAGGGCTTTGCTGTCGGCCGGACAATATTCCGTGAGCCAAGCCGGG
CCTGGATGGCCGGAGAAATAGACGATGCGACGCTGATCAGTCGGGTGCAGAGCACCTTCAACTGGTTGATCGAGTCCTGG
CGCGAAAGCCGCGCCTGA

Upstream 100 bases:

>100_bases
AATATTGATTGATGTGCCTTGACGTTTTACGCTGCATTCACAAAGCAGCGTGTACACATGATGCAAGCGCTGCAGGCTGA
TAAAAATAACAGGAGCCACC

Downstream 100 bases:

>100_bases
TTGGTTCCGGATTTCGACGCCACAACAACGTCGCGATAACAACAAAAAAGGTGCAGCCATGCCCGTTTCGACTTCCACAC
CCAGAATCCGCATCGGCATC

Product: carbohydrate kinase, PfkB

Products: NA

Alternate protein names: 2-deoxy-5-keto-D-gluconate kinase 1; DKG kinase 1 [H]

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MGQTRFATGRQLDLICLGRLGVDLYAQQVGALLEDVSSFAKYLGGSSANIAFGTARLGLRSAMLSRVGDDHMGRFLVESL
AREGCDVSAIKRDPERLTAMVLLGLKDRETFPLVFYRENCADMALRAEDIDEQQIASSKALLITGTHFSTDQVFKASSQA
LDYAKKHDVKRVLDIDYRPVLWGLAGKADGETRFVADQKVSQHVQRILPRFDLIVGTEEEFQIAGGATDLLAALRRVREL
TAATLVVKLGPQGCTVIHGAIPARLEEGAIYPGVQVEVLNVLGAGDAFMSGFLSGWLKEASDERCCQLANACGGLVVSRH
ACAPAMPTPAELDYLFNSPQPITRPDQDVALQRLHQVSVPRKQWRQLFIFAFDHRGQLVELAQQAGRDLGSISQLKQLFV
QAVERVEADLRKRGIEADVGLLADQRFGQDSLNAATGRGWWVARPVEVQGSRPLAFEHGRSIGSNLLAWPQEQIIKCLVQ
YHPDDEPMLRLEQEAQIKALYDASKVSGHELLLEIIPPKDHPSPHPDVMLRSLKRLYNLGIYPAWWKIEAQSAQVWQQLD
ELIQQRDPYCRGVVLLGLNAPVEDLAAGFAEARHSRVCQGFAVGRTIFREPSRAWMAGEIDDATLISRVQSTFNWLIESW
RESRA

Sequences:

>Translated_645_residues
MGQTRFATGRQLDLICLGRLGVDLYAQQVGALLEDVSSFAKYLGGSSANIAFGTARLGLRSAMLSRVGDDHMGRFLVESL
AREGCDVSAIKRDPERLTAMVLLGLKDRETFPLVFYRENCADMALRAEDIDEQQIASSKALLITGTHFSTDQVFKASSQA
LDYAKKHDVKRVLDIDYRPVLWGLAGKADGETRFVADQKVSQHVQRILPRFDLIVGTEEEFQIAGGATDLLAALRRVREL
TAATLVVKLGPQGCTVIHGAIPARLEEGAIYPGVQVEVLNVLGAGDAFMSGFLSGWLKEASDERCCQLANACGGLVVSRH
ACAPAMPTPAELDYLFNSPQPITRPDQDVALQRLHQVSVPRKQWRQLFIFAFDHRGQLVELAQQAGRDLGSISQLKQLFV
QAVERVEADLRKRGIEADVGLLADQRFGQDSLNAATGRGWWVARPVEVQGSRPLAFEHGRSIGSNLLAWPQEQIIKCLVQ
YHPDDEPMLRLEQEAQIKALYDASKVSGHELLLEIIPPKDHPSPHPDVMLRSLKRLYNLGIYPAWWKIEAQSAQVWQQLD
ELIQQRDPYCRGVVLLGLNAPVEDLAAGFAEARHSRVCQGFAVGRTIFREPSRAWMAGEIDDATLISRVQSTFNWLIESW
RESRA
>Mature_644_residues
GQTRFATGRQLDLICLGRLGVDLYAQQVGALLEDVSSFAKYLGGSSANIAFGTARLGLRSAMLSRVGDDHMGRFLVESLA
REGCDVSAIKRDPERLTAMVLLGLKDRETFPLVFYRENCADMALRAEDIDEQQIASSKALLITGTHFSTDQVFKASSQAL
DYAKKHDVKRVLDIDYRPVLWGLAGKADGETRFVADQKVSQHVQRILPRFDLIVGTEEEFQIAGGATDLLAALRRVRELT
AATLVVKLGPQGCTVIHGAIPARLEEGAIYPGVQVEVLNVLGAGDAFMSGFLSGWLKEASDERCCQLANACGGLVVSRHA
CAPAMPTPAELDYLFNSPQPITRPDQDVALQRLHQVSVPRKQWRQLFIFAFDHRGQLVELAQQAGRDLGSISQLKQLFVQ
AVERVEADLRKRGIEADVGLLADQRFGQDSLNAATGRGWWVARPVEVQGSRPLAFEHGRSIGSNLLAWPQEQIIKCLVQY
HPDDEPMLRLEQEAQIKALYDASKVSGHELLLEIIPPKDHPSPHPDVMLRSLKRLYNLGIYPAWWKIEAQSAQVWQQLDE
LIQQRDPYCRGVVLLGLNAPVEDLAAGFAEARHSRVCQGFAVGRTIFREPSRAWMAGEIDDATLISRVQSTFNWLIESWR
ESRA

Specific function: Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP) [H]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=316, Percent_Identity=26.8987341772152, Blast_Score=83, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR022841 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.92 [H]

Molecular weight: Translated: 71547; Mature: 71415

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTRFATGRQLDLICLGRLGVDLYAQQVGALLEDVSSFAKYLGGSSANIAFGTARLGLR
CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
SAMLSRVGDDHMGRFLVESLAREGCDVSAIKRDPERLTAMVLLGLKDRETFPLVFYRENC
HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCH
ADMALRAEDIDEQQIASSKALLITGTHFSTDQVFKASSQALDYAKKHDVKRVLDIDYRPV
HHHHHHHCCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LWGLAGKADGETRFVADQKVSQHVQRILPRFDLIVGTEEEFQIAGGATDLLAALRRVREL
HEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEECCCHHEEECCCHHHHHHHHHHHHHH
TAATLVVKLGPQGCTVIHGAIPARLEEGAIYPGVQVEVLNVLGAGDAFMSGFLSGWLKEA
HHHHEEEEECCCCCEEEECCCCHHHCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHC
SDERCCQLANACGGLVVSRHACAPAMPTPAELDYLFNSPQPITRPDQDVALQRLHQVSVP
CHHHHHHHHHHHCCHHEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
RKQWRQLFIFAFDHRGQLVELAQQAGRDLGSISQLKQLFVQAVERVEADLRKRGIEADVG
HHHHHEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LLADQRFGQDSLNAATGRGWWVARPVEVQGSRPLAFEHGRSIGSNLLAWPQEQIIKCLVQ
HHHHCCCCCCCCCCCCCCCEEEECCEEECCCCCCHHHHCCHHCCHHHCCCHHHHHHHHHH
YHPDDEPMLRLEQEAQIKALYDASKVSGHELLLEIIPPKDHPSPHPDVMLRSLKRLYNLG
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
IYPAWWKIEAQSAQVWQQLDELIQQRDPYCRGVVLLGLNAPVEDLAAGFAEARHSRVCQG
CCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
FAVGRTIFREPSRAWMAGEIDDATLISRVQSTFNWLIESWRESRA
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GQTRFATGRQLDLICLGRLGVDLYAQQVGALLEDVSSFAKYLGGSSANIAFGTARLGLR
CCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
SAMLSRVGDDHMGRFLVESLAREGCDVSAIKRDPERLTAMVLLGLKDRETFPLVFYRENC
HHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCEEEEECCH
ADMALRAEDIDEQQIASSKALLITGTHFSTDQVFKASSQALDYAKKHDVKRVLDIDYRPV
HHHHHHHCCCCHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LWGLAGKADGETRFVADQKVSQHVQRILPRFDLIVGTEEEFQIAGGATDLLAALRRVREL
HEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEECCCHHEEECCCHHHHHHHHHHHHHH
TAATLVVKLGPQGCTVIHGAIPARLEEGAIYPGVQVEVLNVLGAGDAFMSGFLSGWLKEA
HHHHEEEEECCCCCEEEECCCCHHHCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHC
SDERCCQLANACGGLVVSRHACAPAMPTPAELDYLFNSPQPITRPDQDVALQRLHQVSVP
CHHHHHHHHHHHCCHHEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
RKQWRQLFIFAFDHRGQLVELAQQAGRDLGSISQLKQLFVQAVERVEADLRKRGIEADVG
HHHHHEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LLADQRFGQDSLNAATGRGWWVARPVEVQGSRPLAFEHGRSIGSNLLAWPQEQIIKCLVQ
HHHHCCCCCCCCCCCCCCCEEEECCEEECCCCCCHHHHCCHHCCHHHCCCHHHHHHHHHH
YHPDDEPMLRLEQEAQIKALYDASKVSGHELLLEIIPPKDHPSPHPDVMLRSLKRLYNLG
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
IYPAWWKIEAQSAQVWQQLDELIQQRDPYCRGVVLLGLNAPVEDLAAGFAEARHSRVCQG
CCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
FAVGRTIFREPSRAWMAGEIDDATLISRVQSTFNWLIESWRESRA
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA