| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fhuA [H]
Identifier: 66046353
GI number: 66046353
Start: 3745488
End: 3747620
Strand: Reverse
Name: fhuA [H]
Synonym: Psyr_3124
Alternate gene names: 66046353
Gene position: 3747620-3745488 (Counterclockwise)
Preceding gene: 66046362
Following gene: 66046347
Centisome position: 61.5
GC content: 61.09
Gene sequence:
>2133_bases ATGTCGATGCGTCGTACTCTCGTTTCACTTTGCGTTATCCAGGCTATCTCTCAAACTGCCTGGGCCGATCAGGTGCCTGG CGTCCAGCCTGCCATGGAGCTGCAGAATATCGATATCCAGGGCGCCGCCAATGCCGAAACGGCACAAGGGCCGGTCGATG GTTATCGGGCCACACGCTCCGCCAGCGCAACGCGTACCGATACCTCGTTGCACGAAACCCCGCAATCGGTCAGCGTCGTG ACCCGCGAAGCGGTCGAGGACATCGGTTCCACACGTTTGCAGGATGCTCTCGACTACGCGGGTGGCGTCGGGCGAGCCAA CAACTTCGGCGGCCAGGGGCTGACCACCTTTACGGTGCGCGGCTTTACCACCGGCGAGTTCTATCGCAACGGCTTCCCGA TCAATCGTGGTTATCCGAACATGCCGGACGCCAACACCATCGAGCGTCTTGAGGTGCTGCGTGGTCCGGCCACCACGCTC TATGGTCGCGGCGATCCGGGCGGCACCTTCAATGTGCTTTCCAAACAGCCGCTGGCCGAGCCTTCCGTGACGCTGGGCAG TCAGCTCAATGATCAGGGCATGAAGCGCGGAACGCTGGATGCCTCCGGGCCACTGGATGACGAAGGCCGGTTTGCCTATC GCCTGAATGTGGTGGGTGAGGGCGGCGATACGTTCCGTGACCACGTCGAAACCGAGCGCTATGGCGTGGCGCCAGTATTG AGCTGGCAGGTCAACGACGCCACGCGCATCACCTTCGAAGGCGACTTCATGCGCAACAACGCGCCGCTGGATCGCGGTTT GACGCGGTATGCCAACCAGACGGGCACCGCTTCCCGCGACACGTTCTTCGGCGAGAAGAGTGTGGGCAAGCTGCATAACG ATAACAACATGGCACAGCTGCGCTTCGAGCATGACCTCAACCCGGACTGGACGCTGGGCGGTGGCTTACAGATCCTTGAC GGCTCCCTGCAGGGCGATGCCATCGAGGCCAACGGGCTGGCGGCGGACGGTCGCACGCTCGGGCGCAACTTCAACTATCG CAAGCTGGAATGGACCGATCGCGATGTGCAGCTGAATCTGACCGGGCATTTTTCAGCGGGCGGTTTCGAGCACACGCTGC TGACCGGTGTCGAGTACGAAGATTATGACTACAAGTCGATCATTCAACGTTCCAGCGGTGCAGTAGCTGCCTACCCGATC GACCTCTTCAATCCGGTCTACGGCCAGGCTCGTCCGGCACTGACCCGAACGACCACCCATGACAAGGAAAACCTCAAGAC CTGGGCTGCCTTCGTACAGGACCAGGTGGCCCTGACCGAGCGCCTGAAGCTGCTGGGCGGTGTGCGTCTGGAGCGTTTCG AACATGATTACGATTCTTTCCTGCCCGGCACCAGCAGCTGGACTGCCAGCGATAACGCGGTCACACCGCGCCTCGGCCTG AGCTACGACCTGACCGACGACCTTGCCGTCTACGCCACCACCGCTCGCTCGTTCAAGCCCAACAGCGGTGCCAGCCGACT GGGTGGCGGGTTCAAGCCGGAGGAGGGCAAGTCCTATGAAGTCGGAACCAAGTGGGAAGCGCTGGACGGGCAGCTGAGTG TCGACACGGCGATCTATCAGATCGAAAAGCGTAACGTGCTGACCACCGATCCGGTCGATTCAACGTTCAGTGTGGCGGCG GGCGAGGTGCGCAGTCGCGGCCTGGACCTGAACGTGGTCGGCAACCTGACTCCGCAATGGCGGGTAATGGGCAGCTACGC CTACGTGGACGCCGAGGTCACCAAGGACAACACGCTACGCTCCGGTACACGGTTGATGAACATTCCCGAGCAAACGTTCA GCCTGCTCAACGTCTACGAGTTTCAGGACGGCGCCCTGCGTGGTCTGGGCCTGGGCGGCGGCGGTCGCTATGTCGACCAG CGCGCCGGGCGGACAGCCAACACCTCTTTCTCGATGGACAGCTATACAGTGTTTGACCTGTTGGCCTATTACAAGGTCAA CCCGCACGTGAAGCTCAATCTGGACCTGAAGAATGTGTTCGACACAGACTATGAGGAAGGCTCTTTCGGCAATGTCTATG CCTATCCGGGGGCTCCACGGACAGTGCAGGTGGGGATTGCCTATACGTTGTGA
Upstream 100 bases:
>100_bases TATTTTTTGGGAATTTGTATCAGGCGTTAATACGAATCTGTACTATTCGCAAAAAAATCCTGCCAGGTCCCAAGAGGCCT GGTTTCTTGCCAAGGGCTGT
Downstream 100 bases:
>100_bases TGCCGTGTGCCGGTATCGGGTTCTGATGGAGAAAGCTTGACCCTTTCAAGGGCAGGTTCAGCAGCGTGTGTCATGGGCAC CGGCCCTTGCGCACACGCGG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MSMRRTLVSLCVIQAISQTAWADQVPGVQPAMELQNIDIQGAANAETAQGPVDGYRATRSASATRTDTSLHETPQSVSVV TREAVEDIGSTRLQDALDYAGGVGRANNFGGQGLTTFTVRGFTTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATTL YGRGDPGGTFNVLSKQPLAEPSVTLGSQLNDQGMKRGTLDASGPLDDEGRFAYRLNVVGEGGDTFRDHVETERYGVAPVL SWQVNDATRITFEGDFMRNNAPLDRGLTRYANQTGTASRDTFFGEKSVGKLHNDNNMAQLRFEHDLNPDWTLGGGLQILD GSLQGDAIEANGLAADGRTLGRNFNYRKLEWTDRDVQLNLTGHFSAGGFEHTLLTGVEYEDYDYKSIIQRSSGAVAAYPI DLFNPVYGQARPALTRTTTHDKENLKTWAAFVQDQVALTERLKLLGGVRLERFEHDYDSFLPGTSSWTASDNAVTPRLGL SYDLTDDLAVYATTARSFKPNSGASRLGGGFKPEEGKSYEVGTKWEALDGQLSVDTAIYQIEKRNVLTTDPVDSTFSVAA GEVRSRGLDLNVVGNLTPQWRVMGSYAYVDAEVTKDNTLRSGTRLMNIPEQTFSLLNVYEFQDGALRGLGLGGGGRYVDQ RAGRTANTSFSMDSYTVFDLLAYYKVNPHVKLNLDLKNVFDTDYEEGSFGNVYAYPGAPRTVQVGIAYTL
Sequences:
>Translated_710_residues MSMRRTLVSLCVIQAISQTAWADQVPGVQPAMELQNIDIQGAANAETAQGPVDGYRATRSASATRTDTSLHETPQSVSVV TREAVEDIGSTRLQDALDYAGGVGRANNFGGQGLTTFTVRGFTTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATTL YGRGDPGGTFNVLSKQPLAEPSVTLGSQLNDQGMKRGTLDASGPLDDEGRFAYRLNVVGEGGDTFRDHVETERYGVAPVL SWQVNDATRITFEGDFMRNNAPLDRGLTRYANQTGTASRDTFFGEKSVGKLHNDNNMAQLRFEHDLNPDWTLGGGLQILD GSLQGDAIEANGLAADGRTLGRNFNYRKLEWTDRDVQLNLTGHFSAGGFEHTLLTGVEYEDYDYKSIIQRSSGAVAAYPI DLFNPVYGQARPALTRTTTHDKENLKTWAAFVQDQVALTERLKLLGGVRLERFEHDYDSFLPGTSSWTASDNAVTPRLGL SYDLTDDLAVYATTARSFKPNSGASRLGGGFKPEEGKSYEVGTKWEALDGQLSVDTAIYQIEKRNVLTTDPVDSTFSVAA GEVRSRGLDLNVVGNLTPQWRVMGSYAYVDAEVTKDNTLRSGTRLMNIPEQTFSLLNVYEFQDGALRGLGLGGGGRYVDQ RAGRTANTSFSMDSYTVFDLLAYYKVNPHVKLNLDLKNVFDTDYEEGSFGNVYAYPGAPRTVQVGIAYTL >Mature_709_residues SMRRTLVSLCVIQAISQTAWADQVPGVQPAMELQNIDIQGAANAETAQGPVDGYRATRSASATRTDTSLHETPQSVSVVT REAVEDIGSTRLQDALDYAGGVGRANNFGGQGLTTFTVRGFTTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATTLY GRGDPGGTFNVLSKQPLAEPSVTLGSQLNDQGMKRGTLDASGPLDDEGRFAYRLNVVGEGGDTFRDHVETERYGVAPVLS WQVNDATRITFEGDFMRNNAPLDRGLTRYANQTGTASRDTFFGEKSVGKLHNDNNMAQLRFEHDLNPDWTLGGGLQILDG SLQGDAIEANGLAADGRTLGRNFNYRKLEWTDRDVQLNLTGHFSAGGFEHTLLTGVEYEDYDYKSIIQRSSGAVAAYPID LFNPVYGQARPALTRTTTHDKENLKTWAAFVQDQVALTERLKLLGGVRLERFEHDYDSFLPGTSSWTASDNAVTPRLGLS YDLTDDLAVYATTARSFKPNSGASRLGGGFKPEEGKSYEVGTKWEALDGQLSVDTAIYQIEKRNVLTTDPVDSTFSVAAG EVRSRGLDLNVVGNLTPQWRVMGSYAYVDAEVTKDNTLRSGTRLMNIPEQTFSLLNVYEFQDGALRGLGLGGGGRYVDQR AGRTANTSFSMDSYTVFDLLAYYKVNPHVKLNLDLKNVFDTDYEEGSFGNVYAYPGAPRTVQVGIAYTL
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=745, Percent_Identity=29.6644295302013, Blast_Score=259, Evalue=5e-70, Organism=Escherichia coli, GI1787024, Length=764, Percent_Identity=27.2251308900524, Blast_Score=204, Evalue=1e-53, Organism=Escherichia coli, GI1787344, Length=763, Percent_Identity=22.2804718217562, Blast_Score=131, Evalue=2e-31, Organism=Escherichia coli, GI1787723, Length=686, Percent_Identity=24.198250728863, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1790743, Length=157, Percent_Identity=31.2101910828025, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77674; Mature: 77543
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRRTLVSLCVIQAISQTAWADQVPGVQPAMELQNIDIQGAANAETAQGPVDGYRATRS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCC ASATRTDTSLHETPQSVSVVTREAVEDIGSTRLQDALDYAGGVGRANNFGGQGLTTFTVR CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE GFTTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATTLYGRGDPGGTFNVLSKQPLAE CCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCC PSVTLGSQLNDQGMKRGTLDASGPLDDEGRFAYRLNVVGEGGDTFRDHVETERYGVAPVL CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEE SWQVNDATRITFEGDFMRNNAPLDRGLTRYANQTGTASRDTFFGEKSVGKLHNDNNMAQL EEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE RFEHDLNPDWTLGGGLQILDGSLQGDAIEANGLAADGRTLGRNFNYRKLEWTDRDVQLNL EEECCCCCCEEECCCEEEEECCCCCCEEECCCCCCCCHHHCCCCCEEEEEECCCEEEEEE TGHFSAGGFEHTLLTGVEYEDYDYKSIIQRSSGAVAAYPIDLFNPVYGQARPALTRTTTH EEEECCCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEHHHCCCCCCCCCCCEEECCCC DKENLKTWAAFVQDQVALTERLKLLGGVRLERFEHDYDSFLPGTSSWTASDNAVTPRLGL CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC SYDLTDDLAVYATTARSFKPNSGASRLGGGFKPEEGKSYEVGTKWEALDGQLSVDTAIYQ EECCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCEECCCCEECCCCCEEECCEEEE IEKRNVLTTDPVDSTFSVAAGEVRSRGLDLNVVGNLTPQWRVMGSYAYVDAEVTKDNTLR EECCCEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCHH SGTRLMNIPEQTFSLLNVYEFQDGALRGLGLGGGGRYVDQRAGRTANTSFSMDSYTVFDL CCCEEECCCHHHHHHHHHEECCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCHHHHHH LAYYKVNPHVKLNLDLKNVFDTDYEEGSFGNVYAYPGAPRTVQVGIAYTL HHHEECCCCEEEEEEHHHHCCCCCCCCCCCCEEECCCCCCEEEEEEEEEC >Mature Secondary Structure SMRRTLVSLCVIQAISQTAWADQVPGVQPAMELQNIDIQGAANAETAQGPVDGYRATRS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCC ASATRTDTSLHETPQSVSVVTREAVEDIGSTRLQDALDYAGGVGRANNFGGQGLTTFTVR CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE GFTTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATTLYGRGDPGGTFNVLSKQPLAE CCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCC PSVTLGSQLNDQGMKRGTLDASGPLDDEGRFAYRLNVVGEGGDTFRDHVETERYGVAPVL CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEE SWQVNDATRITFEGDFMRNNAPLDRGLTRYANQTGTASRDTFFGEKSVGKLHNDNNMAQL EEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE RFEHDLNPDWTLGGGLQILDGSLQGDAIEANGLAADGRTLGRNFNYRKLEWTDRDVQLNL EEECCCCCCEEECCCEEEEECCCCCCEEECCCCCCCCHHHCCCCCEEEEEECCCEEEEEE TGHFSAGGFEHTLLTGVEYEDYDYKSIIQRSSGAVAAYPIDLFNPVYGQARPALTRTTTH EEEECCCCCCEEEEECCCCCCCCHHHHHHHCCCCEEEEEHHHCCCCCCCCCCCEEECCCC DKENLKTWAAFVQDQVALTERLKLLGGVRLERFEHDYDSFLPGTSSWTASDNAVTPRLGL CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC SYDLTDDLAVYATTARSFKPNSGASRLGGGFKPEEGKSYEVGTKWEALDGQLSVDTAIYQ EECCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCEECCCCEECCCCCEEECCEEEE IEKRNVLTTDPVDSTFSVAAGEVRSRGLDLNVVGNLTPQWRVMGSYAYVDAEVTKDNTLR EECCCEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCHH SGTRLMNIPEQTFSLLNVYEFQDGALRGLGLGGGGRYVDQRAGRTANTSFSMDSYTVFDL CCCEEECCCHHHHHHHHHEECCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCHHHHHH LAYYKVNPHVKLNLDLKNVFDTDYEEGSFGNVYAYPGAPRTVQVGIAYTL HHHEECCCCEEEEEEHHHHCCCCCCCCCCCCEEECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]