| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046362
Identifier: 66046362
GI number: 66046362
Start: 3758448
End: 3759293
Strand: Reverse
Name: 66046362
Synonym: Psyr_3133
Alternate gene names: NA
Gene position: 3759293-3758448 (Counterclockwise)
Preceding gene: 66046363
Following gene: 66046353
Centisome position: 61.69
GC content: 62.29
Gene sequence:
>846_bases ATGATTGATTCCTGTACCACACCAATGCTGGGCATCGATGCCCACGCACATGTCTTCAGCAAGGATTTGAGTCTGGCGTC AGGACGACGTTACAGTCCGGACTACGACGCGACGGTGCACGCCTATCTGGCCAATCTGAGCGAACATGGCTTGAGCCACG GCGTGTTGGTCCAGCCCAGTTTTCTGGGCACTGACAACCGGTTTCTGCTCGACGCCCTGGCGCAGGCTCCGGACCGCTTG CGCGGCGTGGCCGTGGTCGACACGGACATCAGTCGCGGCGTGTTGCAGCGTATGGCCGGGCTGGGCATCGTCGGCATCCG CTTGAACCTGATCGGCAAGCCGCTGCCGGACTTCTCCGCGTCGGAATGGAAAACGCTGTTCAAACACATCTGGACGCTCG GCTGGCATGTCGAACTGCACCGCGAGGTCGCTGACCTGCCAGGGCTGATCCGGCAGTTGCTGCCGTTCGGTTGCAAGCTG GTGATTGACCATTTCGGGCGGCCCGATGCGCGTCCTGGTGTTGCTGATCCGGCCTTCCAGGCCTTGCTGGAGTTGGGCCT GAGCGGGCAGTTGTGGATGAAGGTTTCGGCAATCTACCGTCTGGGCGGCAGTGTCGAGCAGAACGCGGCGTTCGCTCGCG CGGCATTGCCGTTGCTGCTGCAAAGCTTTGGTCCGCGCCGGCTGGTATGGGGCAGCGACTGGCCACACACCCAGCATGAG CACGTGGTCAGCTACACCGATGTGGTCGAGCAGTTCCGCGCGCTCGACTGCCCGGACCCGCTCAGGCGAATTATGTTGGT CGAGGCTCCGCAGGCACTGTTCGATTTCCTGCCGGTGGAAATCTGA
Upstream 100 bases:
>100_bases CCGGTTGCCGAACCACTGGACAAGGGCGCAGCGCAGCAGGCTTGAAAATCCTCTCATCCGCGGCGTTGCGGCGCCGCGTT GACTTCTTGTAGACGGACCC
Downstream 100 bases:
>100_bases GCGGCTAAACAGCAGGTGGCTTGATCCGATAGCTGACCATATACAGCGCCGGGAGGAAAAACAGGGTCAGTAGGGTGGCG ATGGCGATGCCGCCGATCAT
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MIDSCTTPMLGIDAHAHVFSKDLSLASGRRYSPDYDATVHAYLANLSEHGLSHGVLVQPSFLGTDNRFLLDALAQAPDRL RGVAVVDTDISRGVLQRMAGLGIVGIRLNLIGKPLPDFSASEWKTLFKHIWTLGWHVELHREVADLPGLIRQLLPFGCKL VIDHFGRPDARPGVADPAFQALLELGLSGQLWMKVSAIYRLGGSVEQNAAFARAALPLLLQSFGPRRLVWGSDWPHTQHE HVVSYTDVVEQFRALDCPDPLRRIMLVEAPQALFDFLPVEI
Sequences:
>Translated_281_residues MIDSCTTPMLGIDAHAHVFSKDLSLASGRRYSPDYDATVHAYLANLSEHGLSHGVLVQPSFLGTDNRFLLDALAQAPDRL RGVAVVDTDISRGVLQRMAGLGIVGIRLNLIGKPLPDFSASEWKTLFKHIWTLGWHVELHREVADLPGLIRQLLPFGCKL VIDHFGRPDARPGVADPAFQALLELGLSGQLWMKVSAIYRLGGSVEQNAAFARAALPLLLQSFGPRRLVWGSDWPHTQHE HVVSYTDVVEQFRALDCPDPLRRIMLVEAPQALFDFLPVEI >Mature_281_residues MIDSCTTPMLGIDAHAHVFSKDLSLASGRRYSPDYDATVHAYLANLSEHGLSHGVLVQPSFLGTDNRFLLDALAQAPDRL RGVAVVDTDISRGVLQRMAGLGIVGIRLNLIGKPLPDFSASEWKTLFKHIWTLGWHVELHREVADLPGLIRQLLPFGCKL VIDHFGRPDARPGVADPAFQALLELGLSGQLWMKVSAIYRLGGSVEQNAAFARAALPLLLQSFGPRRLVWGSDWPHTQHE HVVSYTDVVEQFRALDCPDPLRRIMLVEAPQALFDFLPVEI
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31091; Mature: 31091
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSCTTPMLGIDAHAHVFSKDLSLASGRRYSPDYDATVHAYLANLSEHGLSHGVLVQPS CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCC FLGTDNRFLLDALAQAPDRLRGVAVVDTDISRGVLQRMAGLGIVGIRLNLIGKPLPDFSA CCCCCCHHHHHHHHHCHHHHCCEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCH SEWKTLFKHIWTLGWHVELHREVADLPGLIRQLLPFGCKLVIDHFGRPDARPGVADPAFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ALLELGLSGQLWMKVSAIYRLGGSVEQNAAFARAALPLLLQSFGPRRLVWGSDWPHTQHE HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH HVVSYTDVVEQFRALDCPDPLRRIMLVEAPQALFDFLPVEI HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure MIDSCTTPMLGIDAHAHVFSKDLSLASGRRYSPDYDATVHAYLANLSEHGLSHGVLVQPS CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCC FLGTDNRFLLDALAQAPDRLRGVAVVDTDISRGVLQRMAGLGIVGIRLNLIGKPLPDFSA CCCCCCHHHHHHHHHCHHHHCCEEEEECCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCH SEWKTLFKHIWTLGWHVELHREVADLPGLIRQLLPFGCKLVIDHFGRPDARPGVADPAFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ALLELGLSGQLWMKVSAIYRLGGSVEQNAAFARAALPLLLQSFGPRRLVWGSDWPHTQHE HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHH HVVSYTDVVEQFRALDCPDPLRRIMLVEAPQALFDFLPVEI HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA