| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046323
Identifier: 66046323
GI number: 66046323
Start: 3709635
End: 3710648
Strand: Direct
Name: 66046323
Synonym: Psyr_3094
Alternate gene names: NA
Gene position: 3709635-3710648 (Clockwise)
Preceding gene: 66046316
Following gene: 66046324
Centisome position: 60.88
GC content: 61.54
Gene sequence:
>1014_bases ATGTCGCTGCCCCGCCTCGCCGCACTCGCTGCCAGCCTGACGCTGTCCACCCTGGCCCTCGCCGCCCCCACTCAGTACCC GCTGACCCTTGAAAACTGTGGCGCGACCCTGACCTTCACGCATGCGCCAACCAAGGCTGTGACCATTGGCCAGGCCGGCA CCGAAATGCTTTACGAACTGGGCCTGGGCGACAGACTGGTCGGCACTTCGCTGTGGTTCAACAACGTATTGCCACGCTTC AAGGCGCAGAACGACAAGGTCGAACGCCTGGCCGACAACGAGCCCAGTTTCGAGGCAGTGATCGGCAAGCGTCCGGAACT GGTGGCCGTGCAGCTGGAGTGGATGGTCGGCAAACAGGGCGTGGTCGGCACCCGCGAGCAGTTCCATGACCTGAAGATAC CCACTTACATCCTGCCGTCCGACTGCGAAGGCAAGGACAATCTGGTCGGTGCCGATGGCACACGTCTGGAGCCATTCCGC ATCGAGACCATCTACAAGAGCATCGGGCAACTGGCGAAGATCTTCGATGTGCAGGATCGCGGCGACGCGCTGGTTACTGA CCTCAAGGCCCGCCTGAGCGCGGCGATTGCCAACGTCAGGCAGAACAAGGCCAACGACGTCTCGGCGCTGTTCTGGTTCT CCAGCTCCGACCTTGCCAGCGACCCTTTCGTGGCAGGCCGCAAAGGTATTCCGGACTTCATGCTCAACAGCCTGGGCATG CGCAATATCGTTCAGTCCGACGAAGAGTGGCCAACCGTGGGCTGGGAAACCATCGCCAAGGCCAACCCGAGCATTCTGGT CATCGCGCGCATGGATCGCCGCCGTTTCCCGGCCGACGATTACCTGAAAAAAATCGAATTCCTCAAGACCGACCCGGTGA CCCGCAACATGGACGCGGTCAAGCATGACCGGATCGTGATCATCGACGCCGAGGGCATGCAGGCTGGCCTGCGTCTGTTC ACCGGGTTCGAGGAACTGGCTGACGCCGCCAACCGTTTCAACGCTGCCAAATGA
Upstream 100 bases:
>100_bases GCACGCGTCGGCATTTCCCGCCGTGCCCGGTCATCATCCGGGGATGTGTTTCCTGATGTGCATTGCGCCCTGGCACCTGC TCCAACGGAGACCGCATTCC
Downstream 100 bases:
>100_bases GATTGCCGATAGCATTGAGTCATGTGCTCTGGGTTTCGGCCGTGCTGGTGCTGGCGATCATGATCGGGGCCGCGATCGGC GAAACCTCGATCAGCCTGCA
Product: periplasmic binding protein
Products: NA
Alternate protein names: Iron Transport Lipoprotein; ABC Transporter; Iron ABC Transporter; Transporter Subunit; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSLPRLAALAASLTLSTLALAAPTQYPLTLENCGATLTFTHAPTKAVTIGQAGTEMLYELGLGDRLVGTSLWFNNVLPRF KAQNDKVERLADNEPSFEAVIGKRPELVAVQLEWMVGKQGVVGTREQFHDLKIPTYILPSDCEGKDNLVGADGTRLEPFR IETIYKSIGQLAKIFDVQDRGDALVTDLKARLSAAIANVRQNKANDVSALFWFSSSDLASDPFVAGRKGIPDFMLNSLGM RNIVQSDEEWPTVGWETIAKANPSILVIARMDRRRFPADDYLKKIEFLKTDPVTRNMDAVKHDRIVIIDAEGMQAGLRLF TGFEELADAANRFNAAK
Sequences:
>Translated_337_residues MSLPRLAALAASLTLSTLALAAPTQYPLTLENCGATLTFTHAPTKAVTIGQAGTEMLYELGLGDRLVGTSLWFNNVLPRF KAQNDKVERLADNEPSFEAVIGKRPELVAVQLEWMVGKQGVVGTREQFHDLKIPTYILPSDCEGKDNLVGADGTRLEPFR IETIYKSIGQLAKIFDVQDRGDALVTDLKARLSAAIANVRQNKANDVSALFWFSSSDLASDPFVAGRKGIPDFMLNSLGM RNIVQSDEEWPTVGWETIAKANPSILVIARMDRRRFPADDYLKKIEFLKTDPVTRNMDAVKHDRIVIIDAEGMQAGLRLF TGFEELADAANRFNAAK >Mature_336_residues SLPRLAALAASLTLSTLALAAPTQYPLTLENCGATLTFTHAPTKAVTIGQAGTEMLYELGLGDRLVGTSLWFNNVLPRFK AQNDKVERLADNEPSFEAVIGKRPELVAVQLEWMVGKQGVVGTREQFHDLKIPTYILPSDCEGKDNLVGADGTRLEPFRI ETIYKSIGQLAKIFDVQDRGDALVTDLKARLSAAIANVRQNKANDVSALFWFSSSDLASDPFVAGRKGIPDFMLNSLGMR NIVQSDEEWPTVGWETIAKANPSILVIARMDRRRFPADDYLKKIEFLKTDPVTRNMDAVKHDRIVIIDAEGMQAGLRLFT GFEELADAANRFNAAK
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37142; Mature: 37011
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPRLAALAASLTLSTLALAAPTQYPLTLENCGATLTFTHAPTKAVTIGQAGTEMLYEL CCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCEEEEECCCCCEEEECCHHHHHHHHH GLGDRLVGTSLWFNNVLPRFKAQNDKVERLADNEPSFEAVIGKRPELVAVQLEWMVGKQG CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCEEEEEEEEEECCCC VVGTREQFHDLKIPTYILPSDCEGKDNLVGADGTRLEPFRIETIYKSIGQLAKIFDVQDR CCCCHHHHHCCCCCEEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC GDALVTDLKARLSAAIANVRQNKANDVSALFWFSSSDLASDPFVAGRKGIPDFMLNSLGM CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCH RNIVQSDEEWPTVGWETIAKANPSILVIARMDRRRFPADDYLKKIEFLKTDPVTRNMDAV HHHHCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHH KHDRIVIIDAEGMQAGLRLFTGFEELADAANRFNAAK CCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCCC >Mature Secondary Structure SLPRLAALAASLTLSTLALAAPTQYPLTLENCGATLTFTHAPTKAVTIGQAGTEMLYEL CCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCEEEEECCCCCEEEECCHHHHHHHHH GLGDRLVGTSLWFNNVLPRFKAQNDKVERLADNEPSFEAVIGKRPELVAVQLEWMVGKQG CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCEEEEEEEEEECCCC VVGTREQFHDLKIPTYILPSDCEGKDNLVGADGTRLEPFRIETIYKSIGQLAKIFDVQDR CCCCHHHHHCCCCCEEECCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC GDALVTDLKARLSAAIANVRQNKANDVSALFWFSSSDLASDPFVAGRKGIPDFMLNSLGM CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCH RNIVQSDEEWPTVGWETIAKANPSILVIARMDRRRFPADDYLKKIEFLKTDPVTRNMDAV HHHHCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHH KHDRIVIIDAEGMQAGLRLFTGFEELADAANRFNAAK CCCCEEEEECCCHHHHHHHHHCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA