Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yhhW [C]

Identifier: 66046280

GI number: 66046280

Start: 3646873

End: 3647709

Strand: Direct

Name: yhhW [C]

Synonym: Psyr_3049

Alternate gene names: 66046280

Gene position: 3646873-3647709 (Clockwise)

Preceding gene: 66046278

Following gene: 66046282

Centisome position: 59.85

GC content: 61.29

Gene sequence:

>837_bases
ATGAACAGCATCGTCAGCATTCGGCCACGCGCCATCGTCCATCGCACTACCGGCAGAACCCGTGGGCCGATCACCCGACT
GGTGAGCCCGGGCGATCTGGGTCAAGTGTTGAAGCCTTTCGTGTTTCTGGATCGAATCGGCTTCACCTCCGAGCCGGGTA
AAACGGGATTCGGCATGCACCCGCACTCGGGTATCGCAACGCTGACCTACATGATCGAAGGCGAACTCACCTATGAGGAC
ACCACCGGTAAATCCGGAACATTGCTCAGCGGCGGTGTGGAATGGATGAGCGCCGGTAACGGCGTCTGGCATGACGCCCA
GCCGATAAGCGGCTCGGCTGTCAGGGGCTTTCAGCTATGGGTCGCGCTGCCCGAAGCGCAGGAAAATGGTCCGGCACAGA
GCGTATACCTGTCGGCAGCGCAGGTTGCGCAACAAGGCCCGGCAAGCGTGCTGCTGGGACGCTACGGCAGCGCAAAGAGC
AGCCTGCCGGCGCCGGAAGGCATGAATTATCTGGCAGTACAGCTAAAGGATGGCGAGCACTGGCGCTACACACCGCCAGC
GGGCCATAGCGTAGGCTGGCTGGCAGTCAACACTGGACAGCTCGACGCGGGCGGCCAGGTCGGCGCGGGTGAACTGGTGA
TTTTCGAGGAATCGGATCGCCCCATCGACATCGTCGCCAAGGGTGATACCCACTTCGTGCTGGGATCGGCAGTCAAGCAT
CCGCACGAACTGGTCACAGGTTACTACTCGGTGCACACCAGCAAAGCCGCGCTGATTCAGGGCGAGCTGGAAATAGAACG
TATCGGCGCACTGTTGCGCGAGGAAGGCAGGCTCTGA

Upstream 100 bases:

>100_bases
CGTATTTATGGATCAGTCCAAGCGAACTATACCGGCTAATCAAGCAATCCATTGACGCTTATTCTTTGCGCTCAGGCATC
AAGGCCCAGAGGAGAACGCC

Downstream 100 bases:

>100_bases
TTGAGCAGCAGCCTTTAAAACAGACCCACCCGAAAGCATTCAGGTGGGTTGCTCAACAGCTATCCCTCTAAGCAACACTA
TCGAGTTCGGCGAGCAATTG

Product: Pirin, N-terminal

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMHPHSGIATLTYMIEGELTYED
TTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLWVALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKS
SLPAPEGMNYLAVQLKDGEHWRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH
PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL

Sequences:

>Translated_278_residues
MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMHPHSGIATLTYMIEGELTYED
TTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLWVALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKS
SLPAPEGMNYLAVQLKDGEHWRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH
PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL
>Mature_278_residues
MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMHPHSGIATLTYMIEGELTYED
TTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLWVALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKS
SLPAPEGMNYLAVQLKDGEHWRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH
PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=109, Percent_Identity=33.9449541284404, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4505823, Length=109, Percent_Identity=33.9449541284404, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 29618; Mature: 29618

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMH
CCCCEEECCEEEEEECCCCCCCCHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PHSGIATLTYMIEGELTYEDTTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLW
CCCCCEEEEEEEECEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCEEEEEEE
VALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKSSLPAPEGMNYLAVQLKDGEH
EECCCCCCCCCHHHEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCC
WRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH
EEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEECHHHCC
PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL
CHHHHHEEHEEECCCEEEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMH
CCCCEEECCEEEEEECCCCCCCCHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PHSGIATLTYMIEGELTYEDTTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLW
CCCCCEEEEEEEECEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCEEEEEEE
VALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKSSLPAPEGMNYLAVQLKDGEH
EECCCCCCCCCHHHEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCC
WRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH
EEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEECHHHCC
PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL
CHHHHHEEHEEECCCEEEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]