| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yhhW [C]
Identifier: 66046280
GI number: 66046280
Start: 3646873
End: 3647709
Strand: Direct
Name: yhhW [C]
Synonym: Psyr_3049
Alternate gene names: 66046280
Gene position: 3646873-3647709 (Clockwise)
Preceding gene: 66046278
Following gene: 66046282
Centisome position: 59.85
GC content: 61.29
Gene sequence:
>837_bases ATGAACAGCATCGTCAGCATTCGGCCACGCGCCATCGTCCATCGCACTACCGGCAGAACCCGTGGGCCGATCACCCGACT GGTGAGCCCGGGCGATCTGGGTCAAGTGTTGAAGCCTTTCGTGTTTCTGGATCGAATCGGCTTCACCTCCGAGCCGGGTA AAACGGGATTCGGCATGCACCCGCACTCGGGTATCGCAACGCTGACCTACATGATCGAAGGCGAACTCACCTATGAGGAC ACCACCGGTAAATCCGGAACATTGCTCAGCGGCGGTGTGGAATGGATGAGCGCCGGTAACGGCGTCTGGCATGACGCCCA GCCGATAAGCGGCTCGGCTGTCAGGGGCTTTCAGCTATGGGTCGCGCTGCCCGAAGCGCAGGAAAATGGTCCGGCACAGA GCGTATACCTGTCGGCAGCGCAGGTTGCGCAACAAGGCCCGGCAAGCGTGCTGCTGGGACGCTACGGCAGCGCAAAGAGC AGCCTGCCGGCGCCGGAAGGCATGAATTATCTGGCAGTACAGCTAAAGGATGGCGAGCACTGGCGCTACACACCGCCAGC GGGCCATAGCGTAGGCTGGCTGGCAGTCAACACTGGACAGCTCGACGCGGGCGGCCAGGTCGGCGCGGGTGAACTGGTGA TTTTCGAGGAATCGGATCGCCCCATCGACATCGTCGCCAAGGGTGATACCCACTTCGTGCTGGGATCGGCAGTCAAGCAT CCGCACGAACTGGTCACAGGTTACTACTCGGTGCACACCAGCAAAGCCGCGCTGATTCAGGGCGAGCTGGAAATAGAACG TATCGGCGCACTGTTGCGCGAGGAAGGCAGGCTCTGA
Upstream 100 bases:
>100_bases CGTATTTATGGATCAGTCCAAGCGAACTATACCGGCTAATCAAGCAATCCATTGACGCTTATTCTTTGCGCTCAGGCATC AAGGCCCAGAGGAGAACGCC
Downstream 100 bases:
>100_bases TTGAGCAGCAGCCTTTAAAACAGACCCACCCGAAAGCATTCAGGTGGGTTGCTCAACAGCTATCCCTCTAAGCAACACTA TCGAGTTCGGCGAGCAATTG
Product: Pirin, N-terminal
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMHPHSGIATLTYMIEGELTYED TTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLWVALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKS SLPAPEGMNYLAVQLKDGEHWRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL
Sequences:
>Translated_278_residues MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMHPHSGIATLTYMIEGELTYED TTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLWVALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKS SLPAPEGMNYLAVQLKDGEHWRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL >Mature_278_residues MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMHPHSGIATLTYMIEGELTYED TTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLWVALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKS SLPAPEGMNYLAVQLKDGEHWRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=109, Percent_Identity=33.9449541284404, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4505823, Length=109, Percent_Identity=33.9449541284404, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 29618; Mature: 29618
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMH CCCCEEECCEEEEEECCCCCCCCHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC PHSGIATLTYMIEGELTYEDTTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLW CCCCCEEEEEEEECEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCEEEEEEE VALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKSSLPAPEGMNYLAVQLKDGEH EECCCCCCCCCHHHEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCC WRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH EEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEECHHHCC PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL CHHHHHEEHEEECCCEEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNSIVSIRPRAIVHRTTGRTRGPITRLVSPGDLGQVLKPFVFLDRIGFTSEPGKTGFGMH CCCCEEECCEEEEEECCCCCCCCHHEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC PHSGIATLTYMIEGELTYEDTTGKSGTLLSGGVEWMSAGNGVWHDAQPISGSAVRGFQLW CCCCCEEEEEEEECEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCCCCCCEEEEEEE VALPEAQENGPAQSVYLSAAQVAQQGPASVLLGRYGSAKSSLPAPEGMNYLAVQLKDGEH EECCCCCCCCCHHHEEHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCC WRYTPPAGHSVGWLAVNTGQLDAGGQVGAGELVIFEESDRPIDIVAKGDTHFVLGSAVKH EEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCEEEECHHHCC PHELVTGYYSVHTSKAALIQGELEIERIGALLREEGRL CHHHHHEEHEEECCCEEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]