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The map label for this gene is 66046278

Identifier: 66046278

GI number: 66046278

Start: 3645369

End: 3645818

Strand: Direct

Name: 66046278

Synonym: Psyr_3047

Alternate gene names: NA

Gene position: 3645369-3645818 (Clockwise)

Preceding gene: 66046277

Following gene: 66046280

Centisome position: 59.82

GC content: 56.44

Gene sequence:

>450_bases
ATGACAGGGATCGGACCACGACTTAAAAAGGAACGTTTGCGCCTCAAGCTTTCGCAGAGTGCATTGGGGGCGATAGGTGG
CGTGGAAACCAACGCCCAGGGCAACTACGAAAATGGCGTCCGCTCCCCCCGTGCGGATTATCTGTCCAGCATTTCGAATG
CCGGAGTGGATGTTGCCTATGTGGTCACCGGCCTCAGCGCTACACGTAACGTCCCCGCTGTCATAACGTCAGACAGTCAG
AGCAGCGCCCCGCTCAACCGCGTCGTCGAACGCCTGCACGGCAACCTGCACGACGTGACCCAGAATCTGTACCACTTCAC
CCGCCTGATCGAATCGAACTCAGGCATTGGCAATGTGGACAGCAATCAGCTGGAAAACATCAAGAACGACGCCGAAGCGA
TCACCGTCGCCACTGTTCGGCTGATCTACATGACGTCACGAATCAAGTAA

Upstream 100 bases:

>100_bases
CACGCAATTCCTCGCCCTAGCAGGGATGTCTGATCAGTCGACGCCAGAAACGCTTGTTAACCCTGACTGTAGCGGTGCAC
AGTTTATCGAGGACAAACGG

Downstream 100 bases:

>100_bases
CGCGCAAGTATCGCGTGCCGCCAAGGCTGTTCAGCGCGCCGGAAACGCCTTGTCCCTGAGTTTGTCCATCACCAACGCAA
TGAATGCCGACACCGCTGGC

Product: helix-hairpin-helix DNA-binding motif-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MTGIGPRLKKERLRLKLSQSALGAIGGVETNAQGNYENGVRSPRADYLSSISNAGVDVAYVVTGLSATRNVPAVITSDSQ
SSAPLNRVVERLHGNLHDVTQNLYHFTRLIESNSGIGNVDSNQLENIKNDAEAITVATVRLIYMTSRIK

Sequences:

>Translated_149_residues
MTGIGPRLKKERLRLKLSQSALGAIGGVETNAQGNYENGVRSPRADYLSSISNAGVDVAYVVTGLSATRNVPAVITSDSQ
SSAPLNRVVERLHGNLHDVTQNLYHFTRLIESNSGIGNVDSNQLENIKNDAEAITVATVRLIYMTSRIK
>Mature_148_residues
TGIGPRLKKERLRLKLSQSALGAIGGVETNAQGNYENGVRSPRADYLSSISNAGVDVAYVVTGLSATRNVPAVITSDSQS
SAPLNRVVERLHGNLHDVTQNLYHFTRLIESNSGIGNVDSNQLENIKNDAEAITVATVRLIYMTSRIK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16079; Mature: 15948

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIGPRLKKERLRLKLSQSALGAIGGVETNAQGNYENGVRSPRADYLSSISNAGVDVAY
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
VVTGLSATRNVPAVITSDSQSSAPLNRVVERLHGNLHDVTQNLYHFTRLIESNSGIGNVD
HHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
SNQLENIKNDAEAITVATVRLIYMTSRIK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGIGPRLKKERLRLKLSQSALGAIGGVETNAQGNYENGVRSPRADYLSSISNAGVDVAY
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHH
VVTGLSATRNVPAVITSDSQSSAPLNRVVERLHGNLHDVTQNLYHFTRLIESNSGIGNVD
HHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
SNQLENIKNDAEAITVATVRLIYMTSRIK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA