| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is zwf [H]
Identifier: 66046219
GI number: 66046219
Start: 3579407
End: 3580939
Strand: Reverse
Name: zwf [H]
Synonym: Psyr_2988
Alternate gene names: 66046219
Gene position: 3580939-3579407 (Counterclockwise)
Preceding gene: 66046220
Following gene: 66046218
Centisome position: 58.76
GC content: 59.75
Gene sequence:
>1533_bases ATGGGCCTGTCGCGTGGCAGTGCCGAGCAAAAAACCGAGGTAGCACCACCCACGACGCTGTTTCTGTTCGGTGCCCATGG CGACCTGGTCAAGCGCCTGTTGATGCCGGCGCTTTACAACCTGTCACGCGACGGTCTGGTGGATGAAGGGCTGCATATCG TCGGCGTCGATCACAATGCGATCAGCGATGCCGATTTTGCGAAAAAGCTCGAGAACTTCATTCGTGATGAAGCCGCCGGC AAGGTTGCCGGCGGCGGCAAGGATCCGCTAGATCCTGCGTTGTGGAGCAAGCTGGCCGAGCGCATCAGTTACGTGCAGGG CGACTTCCTCGACGATTCCACCTATCAGGACATCGCCAGCAAGATCGAGAGCACCGGCACCGCGAACGCGGTGTTTTATC TGGCCACCGCGCCGCGGTTTTTCAGTGAGGTCGCCCAGCGCCTGGGCTCGTCAGGTTTGCTGCAGGAAACCGAAGAAGGG TTTCGTCGTGTCGTGATCGAAAAGCCGTTCGGCTCCGATCTGGCCAGTGCGGTCGAGCTCAATGGCTGCCTGCTCAAGGT CATGAGCGAGAAGCAGATTTATCGGATCGACCATTACCTGGGCAAGGAGACGGTGCAGAACATTCTTGTCAGCCGTTTCT CCAATGGCCTGTTCGAGTCGTTCTGGAACAATCACTACATCGATCACGTTCAGATCACGGCTGCGGAAACCGTAGGCGTT GAAACCCGTGGCAGCTTTTACGAGCACACCGGTGCCTTGCGTGACATGGTGCCCAATCACCTGTTCCAGCTGCTGGCGAT GGTGGCGATGGAGCCGCCTGCCGCTTTCGGTGCCGATGCCGTTCGCGGTGAGAAAGCCAAGGTGGTCGGCGCGATCCGGC CCTGGAGCCAGGAGGAAGCCCTGGCCAATTCGGTGCGTGGCCAGTACGCGAAGGGCGTGATGGGCGACAGGCAGGTCGTC GGTTATCGTCAGGAAGATCGCGTGGAGCCGGACAGCAGCACCGAGACCTACGTTGCACTGAAGGTCATGGTCGACAACTG GCGCTGGGTGGGTGTGCCGTTCTACCTGCGCACCGGCAAGCGTATGAGCGCACGCAGCACCGAAATCGCCATTTGCTTCA AGCCTGCTCCGTACGCGCAGTTCCGCGATACCGAGGTCGACCGGCTCAAGCCCAACTACCTGCGGATCCAGATCCAGCCT AACGAAGGCATGTGGTTCGACCTGTTTGCCAAGCGTCCAGGCCCGAAACTGGAGATGGAAGATATCGCGTTGGGCTTCGC CTACAAGGATTTCTTCGAGATGCAGCCCTCTACCGGGTACGAAACCCTCATTTATGACTGCCTGACCGGTGATCAGACGC TCTTCCAGCGTGCCGACAACATCGAGAACGGCTGGCGTGCCGTGCAGCCGTTCCTCGATGCCTGGGCCGCGCAGCCGCAA GTGCAGCTTTACGAGGCTGGCAAGGATGGCCCGCAAGCGGGTGAAGAGCTGCTGAGTCGTGACGGTCGGGAATGGAGAGA ATTGAATGTCTGA
Upstream 100 bases:
>100_bases CCCTGTTTGCGCGTTTCCGTTCCCGCCAGACAAGCTCGTACGCAGACAAGATGCTGTCCGCCATGCGCTTTGGATTTGGT GGCCACAAGGAACCCAAGTA
Downstream 100 bases:
>100_bases ACTGCCTGTACAGTTCCTGTTGTCCGACATCGACGGCACGTTACTGCGCCGTGATCACAGCCTTAGCCAAGCCAATATCG ACGCCGTCAAGCGCCTGCGT
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MGLSRGSAEQKTEVAPPTTLFLFGAHGDLVKRLLMPALYNLSRDGLVDEGLHIVGVDHNAISDADFAKKLENFIRDEAAG KVAGGGKDPLDPALWSKLAERISYVQGDFLDDSTYQDIASKIESTGTANAVFYLATAPRFFSEVAQRLGSSGLLQETEEG FRRVVIEKPFGSDLASAVELNGCLLKVMSEKQIYRIDHYLGKETVQNILVSRFSNGLFESFWNNHYIDHVQITAAETVGV ETRGSFYEHTGALRDMVPNHLFQLLAMVAMEPPAAFGADAVRGEKAKVVGAIRPWSQEEALANSVRGQYAKGVMGDRQVV GYRQEDRVEPDSSTETYVALKVMVDNWRWVGVPFYLRTGKRMSARSTEIAICFKPAPYAQFRDTEVDRLKPNYLRIQIQP NEGMWFDLFAKRPGPKLEMEDIALGFAYKDFFEMQPSTGYETLIYDCLTGDQTLFQRADNIENGWRAVQPFLDAWAAQPQ VQLYEAGKDGPQAGEELLSRDGREWRELNV
Sequences:
>Translated_510_residues MGLSRGSAEQKTEVAPPTTLFLFGAHGDLVKRLLMPALYNLSRDGLVDEGLHIVGVDHNAISDADFAKKLENFIRDEAAG KVAGGGKDPLDPALWSKLAERISYVQGDFLDDSTYQDIASKIESTGTANAVFYLATAPRFFSEVAQRLGSSGLLQETEEG FRRVVIEKPFGSDLASAVELNGCLLKVMSEKQIYRIDHYLGKETVQNILVSRFSNGLFESFWNNHYIDHVQITAAETVGV ETRGSFYEHTGALRDMVPNHLFQLLAMVAMEPPAAFGADAVRGEKAKVVGAIRPWSQEEALANSVRGQYAKGVMGDRQVV GYRQEDRVEPDSSTETYVALKVMVDNWRWVGVPFYLRTGKRMSARSTEIAICFKPAPYAQFRDTEVDRLKPNYLRIQIQP NEGMWFDLFAKRPGPKLEMEDIALGFAYKDFFEMQPSTGYETLIYDCLTGDQTLFQRADNIENGWRAVQPFLDAWAAQPQ VQLYEAGKDGPQAGEELLSRDGREWRELNV >Mature_509_residues GLSRGSAEQKTEVAPPTTLFLFGAHGDLVKRLLMPALYNLSRDGLVDEGLHIVGVDHNAISDADFAKKLENFIRDEAAGK VAGGGKDPLDPALWSKLAERISYVQGDFLDDSTYQDIASKIESTGTANAVFYLATAPRFFSEVAQRLGSSGLLQETEEGF RRVVIEKPFGSDLASAVELNGCLLKVMSEKQIYRIDHYLGKETVQNILVSRFSNGLFESFWNNHYIDHVQITAAETVGVE TRGSFYEHTGALRDMVPNHLFQLLAMVAMEPPAAFGADAVRGEKAKVVGAIRPWSQEEALANSVRGQYAKGVMGDRQVVG YRQEDRVEPDSSTETYVALKVMVDNWRWVGVPFYLRTGKRMSARSTEIAICFKPAPYAQFRDTEVDRLKPNYLRIQIQPN EGMWFDLFAKRPGPKLEMEDIALGFAYKDFFEMQPSTGYETLIYDCLTGDQTLFQRADNIENGWRAVQPFLDAWAAQPQV QLYEAGKDGPQAGEELLSRDGREWRELNV
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=496, Percent_Identity=34.8790322580645, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI108773793, Length=496, Percent_Identity=34.8790322580645, Blast_Score=279, Evalue=6e-75, Organism=Homo sapiens, GI52145310, Length=392, Percent_Identity=32.6530612244898, Blast_Score=155, Evalue=6e-38, Organism=Escherichia coli, GI1788158, Length=505, Percent_Identity=37.029702970297, Blast_Score=346, Evalue=2e-96, Organism=Caenorhabditis elegans, GI17538218, Length=508, Percent_Identity=35.4330708661417, Blast_Score=281, Evalue=8e-76, Organism=Saccharomyces cerevisiae, GI6324088, Length=498, Percent_Identity=33.1325301204819, Blast_Score=266, Evalue=5e-72, Organism=Drosophila melanogaster, GI24643352, Length=486, Percent_Identity=32.3045267489712, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24643350, Length=486, Percent_Identity=32.3045267489712, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI221513548, Length=484, Percent_Identity=26.8595041322314, Blast_Score=183, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 57058; Mature: 56927
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSRGSAEQKTEVAPPTTLFLFGAHGDLVKRLLMPALYNLSRDGLVDEGLHIVGVDHNA CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC ISDADFAKKLENFIRDEAAGKVAGGGKDPLDPALWSKLAERISYVQGDFLDDSTYQDIAS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KIESTGTANAVFYLATAPRFFSEVAQRLGSSGLLQETEEGFRRVVIEKPFGSDLASAVEL HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHH NGCLLKVMSEKQIYRIDHYLGKETVQNILVSRFSNGLFESFWNNHYIDHVQITAAETVGV HHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCC ETRGSFYEHTGALRDMVPNHLFQLLAMVAMEPPAAFGADAVRGEKAKVVGAIRPWSQEEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCHHHH LANSVRGQYAKGVMGDRQVVGYRQEDRVEPDSSTETYVALKVMVDNWRWVGVPFYLRTGK HHHHHHHHHHHCCCCCCHHCCCCHHCCCCCCCCCCEEEEEEEEECCCEEEECEEEEECCC RMSARSTEIAICFKPAPYAQFRDTEVDRLKPNYLRIQIQPNEGMWFDLFAKRPGPKLEME CCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCHH DIALGFAYKDFFEMQPSTGYETLIYDCLTGDQTLFQRADNIENGWRAVQPFLDAWAAQPQ HHHHHHHHHHHHHCCCCCCHHHHEEEHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC VQLYEAGKDGPQAGEELLSRDGREWRELNV EEEEECCCCCHHHHHHHHHCCCCHHHHCCC >Mature Secondary Structure GLSRGSAEQKTEVAPPTTLFLFGAHGDLVKRLLMPALYNLSRDGLVDEGLHIVGVDHNA CCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC ISDADFAKKLENFIRDEAAGKVAGGGKDPLDPALWSKLAERISYVQGDFLDDSTYQDIAS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KIESTGTANAVFYLATAPRFFSEVAQRLGSSGLLQETEEGFRRVVIEKPFGSDLASAVEL HHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHH NGCLLKVMSEKQIYRIDHYLGKETVQNILVSRFSNGLFESFWNNHYIDHVQITAAETVGV HHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCCC ETRGSFYEHTGALRDMVPNHLFQLLAMVAMEPPAAFGADAVRGEKAKVVGAIRPWSQEEA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCHHHH LANSVRGQYAKGVMGDRQVVGYRQEDRVEPDSSTETYVALKVMVDNWRWVGVPFYLRTGK HHHHHHHHHHHCCCCCCHHCCCCHHCCCCCCCCCCEEEEEEEEECCCEEEECEEEEECCC RMSARSTEIAICFKPAPYAQFRDTEVDRLKPNYLRIQIQPNEGMWFDLFAKRPGPKLEME CCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCHH DIALGFAYKDFFEMQPSTGYETLIYDCLTGDQTLFQRADNIENGWRAVQPFLDAWAAQPQ HHHHHHHHHHHHHCCCCCCHHHHEEEHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC VQLYEAGKDGPQAGEELLSRDGREWRELNV EEEEECCCCCHHHHHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1643289 [H]