| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yegU [H]
Identifier: 66046152
GI number: 66046152
Start: 3509282
End: 3510295
Strand: Direct
Name: yegU [H]
Synonym: Psyr_2921
Alternate gene names: 66046152
Gene position: 3509282-3510295 (Clockwise)
Preceding gene: 66046151
Following gene: 66046153
Centisome position: 57.59
GC content: 66.27
Gene sequence:
>1014_bases ATGAGCGCAACATTTCTGCAAGACCGAGGCCTGGGCGCCTTTTATGGCCTGGCCCTGGGCGACGCCTTGGGCATGCCGAC GCAGTCGCTGCCGCGCGCGTTGATCCTGCAACGCTATGGCCGTATCACTACGCTGATCGGCGCCGATGCCGACCAGCCGA TCGCACCCAACATGCCGGCCGGCGCCATCACCGATGACACCGAGCAGGCCATCCTGGTGGCACAGTTGCTGGTGGCTGGC GGCGGCAGCATTGACCCGACAGCATTGGCCCACAGCCTGATCGAGTGGGAAGCCGCGATGAAAGCCAAGGGCTCCTACGA CCTGCTGGGGCCTTCGACCAAGCGCGCGATTGAAATGATCCTTGACGGCCACAGCCCTGAAGAGGCTGGCCGCTTCGGCA CCACCAATGGCGCGGCAATGCGTATCACCCCGGTAGGCATCGCGGCCGACGTGAGCAACCGCGAGGCCTTCATGGCGCTG GTGGTGCAAGCCTGTCAGGTCACCCATAACACCACGCTGGGCATCTCCAGCGCGGCGGCGGTCGCGGCCGTGGTGTCCGC CGGGATCAATGGCGCGCCCCTGGCCGAAGCGCTGGAGACAGGCGCCGAGGTAGCCCTGAGTGCCGAACGCCATGGCCATT GGGTTGCGGGTGGGCGTATCGCCGCGCGCATTCAATGGGCCAAGGCACTGTGCGCTGACTGCACAGACGAACAGCTGGCC GACCGGGTGCACGATGTGATTGGTACCTCGGTCGCCTCACAGGAATCAGTGGTCGCTGCCTTCACCCTCGCCCACCGCGT GGCGAGCAGCCAGCTCAGTCCGTTCGATGCAGTGTGCATGGCGGCCAGCCTGGGCGGTGACACCGACACGATTGCCGCCA TTCTCGGTGCCATGCTGGGCGCCTGCAACGGCATGCACGCCTGGCCGGCGGCGCTGATCGAGCAAATCGATGCGGTCAAC GCGCTCGACCTCGCGCCTTTGGTCGAACAACTGCTGGCCCTGCGCGCCGGATGA
Upstream 100 bases:
>100_bases TGCGCACGACCTTTGACCGCCGTGAACGTTTTATGGAGCACGTGGAGAGCCTGTTGGACCCCGTGCATTTTCGCCTTCAT CTCGCCTTCGGATCGTCCAC
Downstream 100 bases:
>100_bases TGGACCGGGCTGTGCTCGTCCACTGTTAACGAGATCACTTTCGCCCTCAGCCTTCCGGGCGGCGATCGGGCTAACCCGAT TTCGGAAAGCCAATTTGCAC
Product: ADP-ribosylglycohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSATFLQDRGLGAFYGLALGDALGMPTQSLPRALILQRYGRITTLIGADADQPIAPNMPAGAITDDTEQAILVAQLLVAG GGSIDPTALAHSLIEWEAAMKAKGSYDLLGPSTKRAIEMILDGHSPEEAGRFGTTNGAAMRITPVGIAADVSNREAFMAL VVQACQVTHNTTLGISSAAAVAAVVSAGINGAPLAEALETGAEVALSAERHGHWVAGGRIAARIQWAKALCADCTDEQLA DRVHDVIGTSVASQESVVAAFTLAHRVASSQLSPFDAVCMAASLGGDTDTIAAILGAMLGACNGMHAWPAALIEQIDAVN ALDLAPLVEQLLALRAG
Sequences:
>Translated_337_residues MSATFLQDRGLGAFYGLALGDALGMPTQSLPRALILQRYGRITTLIGADADQPIAPNMPAGAITDDTEQAILVAQLLVAG GGSIDPTALAHSLIEWEAAMKAKGSYDLLGPSTKRAIEMILDGHSPEEAGRFGTTNGAAMRITPVGIAADVSNREAFMAL VVQACQVTHNTTLGISSAAAVAAVVSAGINGAPLAEALETGAEVALSAERHGHWVAGGRIAARIQWAKALCADCTDEQLA DRVHDVIGTSVASQESVVAAFTLAHRVASSQLSPFDAVCMAASLGGDTDTIAAILGAMLGACNGMHAWPAALIEQIDAVN ALDLAPLVEQLLALRAG >Mature_336_residues SATFLQDRGLGAFYGLALGDALGMPTQSLPRALILQRYGRITTLIGADADQPIAPNMPAGAITDDTEQAILVAQLLVAGG GSIDPTALAHSLIEWEAAMKAKGSYDLLGPSTKRAIEMILDGHSPEEAGRFGTTNGAAMRITPVGIAADVSNREAFMALV VQACQVTHNTTLGISSAAAVAAVVSAGINGAPLAEALETGAEVALSAERHGHWVAGGRIAARIQWAKALCADCTDEQLAD RVHDVIGTSVASQESVVAAFTLAHRVASSQLSPFDAVCMAASLGGDTDTIAAILGAMLGACNGMHAWPAALIEQIDAVNA LDLAPLVEQLLALRAG
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP-ribosylglycohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788416, Length=330, Percent_Identity=32.4242424242424, Blast_Score=157, Evalue=9e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005502 [H]
Pfam domain/function: PF03747 ADP_ribosyl_GH [H]
EC number: NA
Molecular weight: Translated: 34464; Mature: 34332
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATFLQDRGLGAFYGLALGDALGMPTQSLPRALILQRYGRITTLIGADADQPIAPNMPA CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC GAITDDTEQAILVAQLLVAGGGSIDPTALAHSLIEWEAAMKAKGSYDLLGPSTKRAIEMI CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LDGHSPEEAGRFGTTNGAAMRITPVGIAADVSNREAFMALVVQACQVTHNTTLGISSAAA HCCCCHHHHCCCCCCCCCEEEEEECEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH VAAVVSAGINGAPLAEALETGAEVALSAERHGHWVAGGRIAARIQWAKALCADCTDEQLA HHHHHHCCCCCCHHHHHHHCCHHEEEEHHHCCCEEECCHHHHHHHHHHHHHHCCCHHHHH DRVHDVIGTSVASQESVVAAFTLAHRVASSQLSPFDAVCMAASLGGDTDTIAAILGAMLG HHHHHHHHCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH ACNGMHAWPAALIEQIDAVNALDLAPLVEQLLALRAG HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SATFLQDRGLGAFYGLALGDALGMPTQSLPRALILQRYGRITTLIGADADQPIAPNMPA CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC GAITDDTEQAILVAQLLVAGGGSIDPTALAHSLIEWEAAMKAKGSYDLLGPSTKRAIEMI CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LDGHSPEEAGRFGTTNGAAMRITPVGIAADVSNREAFMALVVQACQVTHNTTLGISSAAA HCCCCHHHHCCCCCCCCCEEEEEECEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH VAAVVSAGINGAPLAEALETGAEVALSAERHGHWVAGGRIAARIQWAKALCADCTDEQLA HHHHHHCCCCCCHHHHHHHCCHHEEEEHHHCCCEEECCHHHHHHHHHHHHHHCCCHHHHH DRVHDVIGTSVASQESVVAAFTLAHRVASSQLSPFDAVCMAASLGGDTDTIAAILGAMLG HHHHHHHHCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH ACNGMHAWPAALIEQIDAVNALDLAPLVEQLLALRAG HCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]