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The map label for this gene is phnF [C]

Identifier: 66046151

GI number: 66046151

Start: 3508566

End: 3509285

Strand: Direct

Name: phnF [C]

Synonym: Psyr_2920

Alternate gene names: 66046151

Gene position: 3508566-3509285 (Clockwise)

Preceding gene: 66046150

Following gene: 66046152

Centisome position: 57.58

GC content: 63.33

Gene sequence:

>720_bases
ATGTACATGACTAGACAGGTTCGATTTGACAAGAAAACCCAGGTGATCAATGAGCTGATCCGCCGTATCGAAAGCGGCCA
GATGAGCTCGGGTGCCCTGCTTCCCGGGGAAAATCTCCTGGCCCAGGAATTCAACGTCAGCCGCGGCACGCTGCGCGAGG
CGTTGTCCGAGCTCAAGCGGCGTAACTTCATTGCCACGCAGACCGGCGTGGGCTCGATCGTCACCTACGACGGCTTCAGC
CTGGACCAGCGTGCCGGCTGGGCCCAGGCCCTGGCCGACACGGGTGCTGGCGTGCGTACGGAAATCCTGCGCCTGGTGGC
GGTGCAACGCCCCGACATGGAAGTGCGCCTGGGCACTTCCAGTCTGGTGGCTCTGGACCGCCGACGTATCGCCGCCGACG
GCAGTATCGTTTCCCTGGAGCGCGCACTGATCCCGGCGGTCGACGGCCTGGAAAACCTGCCGCAAAACGGCCTGCTGGAA
CAGTCACTCACGGTGACCATGGCCGCGCACGGCTTCATTGGCGACAAGGGTGACCAGTGGATCGGCGCAGGCCCCTTGAA
CCGTGATGACGCCGCGCTGCTGGCACGCGAGCCCGGCACGGTGTTTCTCAAGGCCGTGCGCACGACCTTTGACCGCCGTG
AACGTTTTATGGAGCACGTGGAGAGCCTGTTGGACCCCGTGCATTTTCGCCTTCATCTCGCCTTCGGATCGTCCACATGA

Upstream 100 bases:

>100_bases
TGTGCGCAGACGATGAGACCAATGCCTTAAGCACGGTACGTCGCATGACAATGTGCCACGCAAAAACAGCTTGCATTCCG
ATCCAACATGCCACTATAAA

Downstream 100 bases:

>100_bases
GCGCAACATTTCTGCAAGACCGAGGCCTGGGCGCCTTTTATGGCCTGGCCCTGGGCGACGCCTTGGGCATGCCGACGCAG
TCGCTGCCGCGCGCGTTGAT

Product: transcriptional regulator GntR

Products: NA

Alternate protein names: Transcription Regulator; Transcriptional Regulator GntR Family; Transcriptional Regulator GntR; Transcriptional Regulator; GntR Family Regulatory Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MYMTRQVRFDKKTQVINELIRRIESGQMSSGALLPGENLLAQEFNVSRGTLREALSELKRRNFIATQTGVGSIVTYDGFS
LDQRAGWAQALADTGAGVRTEILRLVAVQRPDMEVRLGTSSLVALDRRRIAADGSIVSLERALIPAVDGLENLPQNGLLE
QSLTVTMAAHGFIGDKGDQWIGAGPLNRDDAALLAREPGTVFLKAVRTTFDRRERFMEHVESLLDPVHFRLHLAFGSST

Sequences:

>Translated_239_residues
MYMTRQVRFDKKTQVINELIRRIESGQMSSGALLPGENLLAQEFNVSRGTLREALSELKRRNFIATQTGVGSIVTYDGFS
LDQRAGWAQALADTGAGVRTEILRLVAVQRPDMEVRLGTSSLVALDRRRIAADGSIVSLERALIPAVDGLENLPQNGLLE
QSLTVTMAAHGFIGDKGDQWIGAGPLNRDDAALLAREPGTVFLKAVRTTFDRRERFMEHVESLLDPVHFRLHLAFGSST
>Mature_239_residues
MYMTRQVRFDKKTQVINELIRRIESGQMSSGALLPGENLLAQEFNVSRGTLREALSELKRRNFIATQTGVGSIVTYDGFS
LDQRAGWAQALADTGAGVRTEILRLVAVQRPDMEVRLGTSSLVALDRRRIAADGSIVSLERALIPAVDGLENLPQNGLLE
QSLTVTMAAHGFIGDKGDQWIGAGPLNRDDAALLAREPGTVFLKAVRTTFDRRERFMEHVESLLDPVHFRLHLAFGSST

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. By Similarity Could Be A Transcriptional Regulator. [C]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26330; Mature: 26330

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMTRQVRFDKKTQVINELIRRIESGQMSSGALLPGENLLAQEFNVSRGTLREALSELKR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
RNFIATQTGVGSIVTYDGFSLDQRAGWAQALADTGAGVRTEILRLVAVQRPDMEVRLGTS
CCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCH
SLVALDRRRIAADGSIVSLERALIPAVDGLENLPQNGLLEQSLTVTMAAHGFIGDKGDQW
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCCCCCCCE
IGAGPLNRDDAALLAREPGTVFLKAVRTTFDRRERFMEHVESLLDPVHFRLHLAFGSST
ECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEECCCC
>Mature Secondary Structure
MYMTRQVRFDKKTQVINELIRRIESGQMSSGALLPGENLLAQEFNVSRGTLREALSELKR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
RNFIATQTGVGSIVTYDGFSLDQRAGWAQALADTGAGVRTEILRLVAVQRPDMEVRLGTS
CCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCH
SLVALDRRRIAADGSIVSLERALIPAVDGLENLPQNGLLEQSLTVTMAAHGFIGDKGDQW
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEECCCCCCCCCCE
IGAGPLNRDDAALLAREPGTVFLKAVRTTFDRRERFMEHVESLLDPVHFRLHLAFGSST
ECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA