Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yxlA [H]

Identifier: 66046153

GI number: 66046153

Start: 3510456

End: 3511925

Strand: Direct

Name: yxlA [H]

Synonym: Psyr_2922

Alternate gene names: 66046153

Gene position: 3510456-3511925 (Clockwise)

Preceding gene: 66046152

Following gene: 66046154

Centisome position: 57.61

GC content: 62.52

Gene sequence:

>1470_bases
ATGACTACATCGTCCCCCTCTCAAGGTGCGGGTCAGCTGGAAACCCGCGGTATCGAGCCGGTTCCTGAAAACGAATGCAA
CGGCCACCCGCTGCAGTTGTTCTGGGTCTGGTTCGCCGCCAATATCAGCATCCTCGGCTTGCCGCTCGGTGCCACCCTGG
TGGCGTTCCAGGGGCTGGCCATCTGGCAGGCAATTATCGTCGCCATCCTCGGTGCCGCCGGCTCTTTCGCCGTGGTGGGC
GTGATCTCCATTGCCGGGCGCCGCGGGCGAGCCCCGAGCCTGACGCTGTCCCGGGCCATCTTCGGGGTACGAGGCAATAT
CGGTCCCACGCTGGTTTCGCTGATGTCGCGTCTGGGCTGGGAAACGGTCAACACCACCACCGCCGCTTTCGTCCTGCTGT
CACTGTTCGCAATCCTTTTCGGCACCCCCGTGAAGGCGAAAAACTCGCCTGGCCTGACCCTGGTGTTCATCGCCTTATTC
GTACTGCTGACCCTGACCGTCTCGGGTTTGGGCCATGCCACCTTGCTGGTCATCCAGAAATGGGCGACTTACCTGTTTGG
CGCTCTGAACCTGGTGGTCGGTGGCTTTCTACTCACCCACATCGATTGGAGCCTGGTCTTCGACGCGCCGGCAGCGCCAC
TGAGTGCCATGATTATTGGCGTCGGCACCATGGCCGCAGGCACCGGTATCGGTTGGGCCAATGCGGGCGCCGACATGTCG
CGCTATCAGCACGCCAGCGTGAAGGCCACTCGCCTGGTGGCCTCGGCGGCACTTGGCGCAGGGATCCCTCTGGTTTTGCT
GATCACCCTCGGCGGCTTGCTGTCGGTGGGCAACGATCATCTGGCGTCAGCCACCGACCCGATCATCGCCATTCGCGAGA
TGTTGCCCACCTGGATGGCCGTGCCCTACCTGATCACGGCGTTCGGCGGCCTGCTGTTGTCCAACAACCTGTCGGTCTAC
TCGGCCGGCCTGACGACCTTGACCCTCGGCCTGAAGGTCAAGCGAGTACACGCAGTCATCGTCGATATCATCGCGATCTT
TGCCGGTTCGATCTACTTCATGCTGATCGCCGACAGCTTCTACGGCCCCTTCATTACGTTCATCTCGATGTTGGCAGTGC
CCATTACCGCGTGGGTCGGCATCTTTGTCGTCGACCTGCTGCACCGCCACATCTACTCCCCAAAAGACCTGCTGGACCAG
ACCCCACGCAGCGCTTACTGGTATCGCGGCGGCGTCGAATGGCGCGCGCTGGGCTCGTGGGCATTGGCAATCGTGCTTGG
CTTCAGCTTCACCACCGTGGCCACCACCCCGGAGCATGTGCTGTTCAAAGGCTTCCTCGCCGATTCCTGGCTGGGCCATA
ACGGCCTGGGCTGGATCGTGACCTTCATTGTCGCCGGTGGCCTGTATGCGCTGCTCGGCGGGGCGCGTGATCGCCGTGTC
GTTACCGAAGAGGCTGCCCATGCCCGCTAA

Upstream 100 bases:

>100_bases
GGCGATCGGGCTAACCCGATTTCGGAAAGCCAATTTGCACTGGATTGCACCTGCTGACGTACTGCCACAACCACAATAAA
AGGCAATAGGAGCAACGCAA

Downstream 100 bases:

>100_bases
ATTGTTCTACACCGGCCAAGTCGTGGTTGACTTGGTGATGGCCATCGACCGCCTGCCGCCGTCGGGCGGAGACGTGTTGG
CTACCAGCGCTACGTTCGAG

Product: permease for cytosine/purines, uracil, thiamine, allantoin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 488

Protein sequence:

>489_residues
MTTSSPSQGAGQLETRGIEPVPENECNGHPLQLFWVWFAANISILGLPLGATLVAFQGLAIWQAIIVAILGAAGSFAVVG
VISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGWETVNTTTAAFVLLSLFAILFGTPVKAKNSPGLTLVFIALF
VLLTLTVSGLGHATLLVIQKWATYLFGALNLVVGGFLLTHIDWSLVFDAPAAPLSAMIIGVGTMAAGTGIGWANAGADMS
RYQHASVKATRLVASAALGAGIPLVLLITLGGLLSVGNDHLASATDPIIAIREMLPTWMAVPYLITAFGGLLLSNNLSVY
SAGLTTLTLGLKVKRVHAVIVDIIAIFAGSIYFMLIADSFYGPFITFISMLAVPITAWVGIFVVDLLHRHIYSPKDLLDQ
TPRSAYWYRGGVEWRALGSWALAIVLGFSFTTVATTPEHVLFKGFLADSWLGHNGLGWIVTFIVAGGLYALLGGARDRRV
VTEEAAHAR

Sequences:

>Translated_489_residues
MTTSSPSQGAGQLETRGIEPVPENECNGHPLQLFWVWFAANISILGLPLGATLVAFQGLAIWQAIIVAILGAAGSFAVVG
VISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGWETVNTTTAAFVLLSLFAILFGTPVKAKNSPGLTLVFIALF
VLLTLTVSGLGHATLLVIQKWATYLFGALNLVVGGFLLTHIDWSLVFDAPAAPLSAMIIGVGTMAAGTGIGWANAGADMS
RYQHASVKATRLVASAALGAGIPLVLLITLGGLLSVGNDHLASATDPIIAIREMLPTWMAVPYLITAFGGLLLSNNLSVY
SAGLTTLTLGLKVKRVHAVIVDIIAIFAGSIYFMLIADSFYGPFITFISMLAVPITAWVGIFVVDLLHRHIYSPKDLLDQ
TPRSAYWYRGGVEWRALGSWALAIVLGFSFTTVATTPEHVLFKGFLADSWLGHNGLGWIVTFIVAGGLYALLGGARDRRV
VTEEAAHAR
>Mature_488_residues
TTSSPSQGAGQLETRGIEPVPENECNGHPLQLFWVWFAANISILGLPLGATLVAFQGLAIWQAIIVAILGAAGSFAVVGV
ISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGWETVNTTTAAFVLLSLFAILFGTPVKAKNSPGLTLVFIALFV
LLTLTVSGLGHATLLVIQKWATYLFGALNLVVGGFLLTHIDWSLVFDAPAAPLSAMIIGVGTMAAGTGIGWANAGADMSR
YQHASVKATRLVASAALGAGIPLVLLITLGGLLSVGNDHLASATDPIIAIREMLPTWMAVPYLITAFGGLLLSNNLSVYS
AGLTTLTLGLKVKRVHAVIVDIIAIFAGSIYFMLIADSFYGPFITFISMLAVPITAWVGIFVVDLLHRHIYSPKDLLDQT
PRSAYWYRGGVEWRALGSWALAIVLGFSFTTVATTPEHVLFKGFLADSWLGHNGLGWIVTFIVAGGLYALLGGARDRRVV
TEEAAHAR

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the purine-cytosine permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001248 [H]

Pfam domain/function: PF02133 Transp_cyt_pur [H]

EC number: NA

Molecular weight: Translated: 51701; Mature: 51570

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSPSQGAGQLETRGIEPVPENECNGHPLQLFWVWFAANISILGLPLGATLVAFQGLA
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHEEHHCCCEEEEECHHHHHHHHHHHH
IWQAIIVAILGAAGSFAVVGVISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGW
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
ETVNTTTAAFVLLSLFAILFGTPVKAKNSPGLTLVFIALFVLLTLTVSGLGHATLLVIQK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WATYLFGALNLVVGGFLLTHIDWSLVFDAPAAPLSAMIIGVGTMAAGTGIGWANAGADMS
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH
RYQHASVKATRLVASAALGAGIPLVLLITLGGLLSVGNDHLASATDPIIAIREMLPTWMA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VPYLITAFGGLLLSNNLSVYSAGLTTLTLGLKVKRVHAVIVDIIAIFAGSIYFMLIADSF
HHHHHHHHHHHHHCCCCCEEECCHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGPFITFISMLAVPITAWVGIFVVDLLHRHIYSPKDLLDQTPRSAYWYRGGVEWRALGSW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCCCEEHHHHH
ALAIVLGFSFTTVATTPEHVLFKGFLADSWLGHNGLGWIVTFIVAGGLYALLGGARDRRV
HHHHHHHCCHHEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
VTEEAAHAR
HHHHHCCCC
>Mature Secondary Structure 
TTSSPSQGAGQLETRGIEPVPENECNGHPLQLFWVWFAANISILGLPLGATLVAFQGLA
CCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHEEHHCCCEEEEECHHHHHHHHHHHH
IWQAIIVAILGAAGSFAVVGVISIAGRRGRAPSLTLSRAIFGVRGNIGPTLVSLMSRLGW
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCC
ETVNTTTAAFVLLSLFAILFGTPVKAKNSPGLTLVFIALFVLLTLTVSGLGHATLLVIQK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WATYLFGALNLVVGGFLLTHIDWSLVFDAPAAPLSAMIIGVGTMAAGTGIGWANAGADMS
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH
RYQHASVKATRLVASAALGAGIPLVLLITLGGLLSVGNDHLASATDPIIAIREMLPTWMA
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VPYLITAFGGLLLSNNLSVYSAGLTTLTLGLKVKRVHAVIVDIIAIFAGSIYFMLIADSF
HHHHHHHHHHHHHCCCCCEEECCHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGPFITFISMLAVPITAWVGIFVVDLLHRHIYSPKDLLDQTPRSAYWYRGGVEWRALGSW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCCCEEHHHHH
ALAIVLGFSFTTVATTPEHVLFKGFLADSWLGHNGLGWIVTFIVAGGLYALLGGARDRRV
HHHHHHHCCHHEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
VTEEAAHAR
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]