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The map label for this gene is dppC [H]

Identifier: 66045916

GI number: 66045916

Start: 3251971

End: 3252843

Strand: Direct

Name: dppC [H]

Synonym: Psyr_2680

Alternate gene names: 66045916

Gene position: 3251971-3252843 (Clockwise)

Preceding gene: 66045915

Following gene: 66045917

Centisome position: 53.37

GC content: 61.86

Gene sequence:

>873_bases
ATGACCGCTATTGCCAGCCTCCCGCACAGCGCGATCCTGCCCCGCAGTCGCTCGCCTTTTCTGAAGAAATTCCTTGCCAA
CAAAGGCGCGGTACTTGGCGCGGCGGTGTTGCTGCTGTTTGTCCTGGCGGCGGTTCTGGCGCCCTGGATTGCGCCGCATG
ATCCGCTCAAAGCCAACTTCCTCGCCGTACGCAAGGCCCCCTCATTGATCTACTGGATGGGCACCGATGAATTGGGGCGC
GATCTGTTCTCACGCTTGCTGTATGGCGCACGCAGTTCACTGCTGGCCGGTGGTGTTTCGGTGGCCATCGCCATGTTCAT
CGGCGTGCCTCTGGGTCTGTTGGCCGGGTACTTTGGCGGCAAGCTGGACATGATCATTTCGCAGGTCATGGAAGCGCTGC
TGTCCTGCCCGTTTCTGGTGCTGGCCATCGCTTTGGGCGCCTTTCTCGGCCCCAGCCTGACCAACGCGATGATCGCCATC
GGCCTGTCCGCGATGCCGATCTTTGCCAGGCTGACCCGCGGCCAGGTGCTGTCGATCAAGCACGAGGATTACCTCGAAGG
TGCCCGCGCCATTGGTCTGCCGGATCGCTGGATCATCCTGCGTTATGTGCTGCCCAACGTGATGTCGCCATTGGTCGTGC
AGGCAACGCTGACCATCGCCTCGGCGATTCTGGCTGAAGCCAGCCTGTCGTTCCTCGGCCTGGGCCAGCAACCGCCGTCG
CCGTCCTGGGGCTCGATGCTCAATACTGCGAAGAATTTCATGGAGCAGGCTCCGTGGATGTCGATTGCGCCTGGCGTGGC
GATCTACATCACGGTCCTGTGTTTCAACCTGCTGGGTGACGGCCTGCGCGATGCGCTGGACCCCAAGGGCTAA

Upstream 100 bases:

>100_bases
TGCAAGGCGTGGTGTTGTGTGTCGCGATTGGCTTCCTGATGTTGAACCTGCTGGCCGACGTGCTTTATCGCCTGATCAAC
CCACGTCTGAGGACTGCCTG

Downstream 100 bases:

>100_bases
ACCTTTCGTCTTCTGCCAAAGAGAAACGCTTATGTTCGATGATCTGGATTACAACCAACCGTACGCGTCGGCCCGCTCGC
CGGTGATGGGCAACAACATG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTAIASLPHSAILPRSRSPFLKKFLANKGAVLGAAVLLLFVLAAVLAPWIAPHDPLKANFLAVRKAPSLIYWMGTDELGR
DLFSRLLYGARSSLLAGGVSVAIAMFIGVPLGLLAGYFGGKLDMIISQVMEALLSCPFLVLAIALGAFLGPSLTNAMIAI
GLSAMPIFARLTRGQVLSIKHEDYLEGARAIGLPDRWIILRYVLPNVMSPLVVQATLTIASAILAEASLSFLGLGQQPPS
PSWGSMLNTAKNFMEQAPWMSIAPGVAIYITVLCFNLLGDGLRDALDPKG

Sequences:

>Translated_290_residues
MTAIASLPHSAILPRSRSPFLKKFLANKGAVLGAAVLLLFVLAAVLAPWIAPHDPLKANFLAVRKAPSLIYWMGTDELGR
DLFSRLLYGARSSLLAGGVSVAIAMFIGVPLGLLAGYFGGKLDMIISQVMEALLSCPFLVLAIALGAFLGPSLTNAMIAI
GLSAMPIFARLTRGQVLSIKHEDYLEGARAIGLPDRWIILRYVLPNVMSPLVVQATLTIASAILAEASLSFLGLGQQPPS
PSWGSMLNTAKNFMEQAPWMSIAPGVAIYITVLCFNLLGDGLRDALDPKG
>Mature_289_residues
TAIASLPHSAILPRSRSPFLKKFLANKGAVLGAAVLLLFVLAAVLAPWIAPHDPLKANFLAVRKAPSLIYWMGTDELGRD
LFSRLLYGARSSLLAGGVSVAIAMFIGVPLGLLAGYFGGKLDMIISQVMEALLSCPFLVLAIALGAFLGPSLTNAMIAIG
LSAMPIFARLTRGQVLSIKHEDYLEGARAIGLPDRWIILRYVLPNVMSPLVVQATLTIASAILAEASLSFLGLGQQPPSP
SWGSMLNTAKNFMEQAPWMSIAPGVAIYITVLCFNLLGDGLRDALDPKG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=46.2093862815885, Blast_Score=243, Evalue=9e-66,
Organism=Escherichia coli, GI1787760, Length=290, Percent_Identity=45.1724137931035, Blast_Score=235, Evalue=2e-63,
Organism=Escherichia coli, GI1789964, Length=276, Percent_Identity=45.2898550724638, Blast_Score=201, Evalue=6e-53,
Organism=Escherichia coli, GI1787498, Length=270, Percent_Identity=39.2592592592593, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787549, Length=292, Percent_Identity=34.5890410958904, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=34.9794238683128, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1788505, Length=275, Percent_Identity=33.8181818181818, Blast_Score=128, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30780; Mature: 30649

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIASLPHSAILPRSRSPFLKKFLANKGAVLGAAVLLLFVLAAVLAPWIAPHDPLKANF
CCCCHHCCCHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LAVRKAPSLIYWMGTDELGRDLFSRLLYGARSSLLAGGVSVAIAMFIGVPLGLLAGYFGG
HHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KLDMIISQVMEALLSCPFLVLAIALGAFLGPSLTNAMIAIGLSAMPIFARLTRGQVLSIK
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
HEDYLEGARAIGLPDRWIILRYVLPNVMSPLVVQATLTIASAILAEASLSFLGLGQQPPS
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PSWGSMLNTAKNFMEQAPWMSIAPGVAIYITVLCFNLLGDGLRDALDPKG
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAIASLPHSAILPRSRSPFLKKFLANKGAVLGAAVLLLFVLAAVLAPWIAPHDPLKANF
CCCHHCCCHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LAVRKAPSLIYWMGTDELGRDLFSRLLYGARSSLLAGGVSVAIAMFIGVPLGLLAGYFGG
HHEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KLDMIISQVMEALLSCPFLVLAIALGAFLGPSLTNAMIAIGLSAMPIFARLTRGQVLSIK
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
HEDYLEGARAIGLPDRWIILRYVLPNVMSPLVVQATLTIASAILAEASLSFLGLGQQPPS
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PSWGSMLNTAKNFMEQAPWMSIAPGVAIYITVLCFNLLGDGLRDALDPKG
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]