| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ywrD [H]
Identifier: 66045917
GI number: 66045917
Start: 3252821
End: 3254470
Strand: Direct
Name: ywrD [H]
Synonym: Psyr_2681
Alternate gene names: 66045917
Gene position: 3252821-3254470 (Clockwise)
Preceding gene: 66045916
Following gene: 66045919
Centisome position: 53.38
GC content: 62.97
Gene sequence:
>1650_bases ATGCGCTGGACCCCAAGGGCTAAACCTTTCGTCTTCTGCCAAAGAGAAACGCTTATGTTCGATGATCTGGATTACAACCA ACCGTACGCGTCGGCCCGCTCGCCGGTGATGGGCAACAACATGGTCGCCTGCTCTCAGCCATTGGCCGCTCAGGCCGGGC TGGACATGCTGCGCCGTGGCGGTAACGCGGTCGACGCCGCCATCGCCGCGGCCATGGTGCTGACTGTGGTCGAGCCCACC GGCTGCGGAATCGGCAGCGATGCCTTCGCCATCGTCTGGGACGGCAGCAAGCTGCAAGGCTTGAACGCGTCCGGCCGCGC GCCACAAGCCTGGACACCGGAATACTTCGAAGGCCAGAGCCAGATGGCGCAACGCGGCTGGCCTGCGGTCAGCGTGCCAG GTGCGGTATCGGCCTGGGTGGAACTGTCAGCGCGCTACGGCAAACTGCCCTTCGCGACCCTGGCCGAACCGGCGATTGGC TACGCCCGCGACGGCTATCAGGTCACGCCGATCATCGCCGAGTTGTGGAAACGCGGCGCGCATCTGCTCAAAGACCAACC GGGCTTTGCCGAGTGCTTCATGCCGGGTGGCAAGGCCCCTATGGCCGGAGAAAAAATCCGGCTCAAGGATCACGCCCGCA CGCTGGAACTGATCGCGCAGACCAAAGGCGAAGCGTTCTATCGCGGCGAACTGGCGCAAACCATCATCGCCCATGCCAAC GCCAATGGCAGCGTAATGAGCCTCGACGACCTGGCGACGCATACCGTGGACTGGATCGACACCCTGTCGGTGCCCTACGC AGGCGCTGTGGTGCATGAACTCCCGCCGAATGGCCAGGGCATTGCCACCTTGGCCGGCCTGACCATGCTCGAAGCACTGG GCGTCGGCGAACACCCGGTGGACAGCCTTGAAACGGTTCACCCGGTGCTGGAAGCAATGAAACTGGCCTTGGCCGACCTC GACGAACATGTCGCCGACAGCGAGCACATGCGCGTGCCCTCAGCCGATTTGCTGGGCAAGGCGTACCTGACAGAACGCGC GGGCCTGATCACCGATCAGGCCGCCAATCCCGGGCACGGCTCGCCAAAACCGGGCGGCACGGTGTACCTCTCGGCAGCGG ACGAAAGCGGCATGATGATCTCGTTCATCCAGTCCAACTACATGGGCTTCGGTTCGGGTGTGGTGGTACCCGGTACGGGC ATCAGCATGCAGAACCGTGGCGCGGGCTTCTCGCTGGATCCGCAACACGTCAATTACGTTGCGCCGCGCAAACGCCCGTT CCATACCATCATCCCCGGTTTTGTCATGAATGCCGACGGCACGCCGCTGATGTCCTTCGGTTTGATGGGCGGCCCGATGC AGGCGCAGGGTCATTTGCAGATGATGATGCGCATCCTGCGCTACAAACAGAACCCGCAAGCCGCTGCCGACGCACCGCGC TGGAGAATCGAAGCCGGTCTGAAAGTCGCCGTGGAGCGTGCGTTTGACCCCGAAGTGGTGAAAGCACTGCGCGCCAAAGG TCACGACATCGATGTCGAAGAACCGAGCGGCGTGTTTGCCTTCGGCGGTGCGCAGATTATTCAGCGCACCGCGCATGGAT ACGTGGGCGGGACCGATCCGAGAAAGGACGGAACGGTCGCAGCTTATTAA
Upstream 100 bases:
>100_bases AAGAATTTCATGGAGCAGGCTCCGTGGATGTCGATTGCGCCTGGCGTGGCGATCTACATCACGGTCCTGTGTTTCAACCT GCTGGGTGACGGCCTGCGCG
Downstream 100 bases:
>100_bases CCGAGGCCTCTAGCGCTTGGCAGGCGGCGACCGGTCGTGCGCAGTGAGCGAATCCGTTCAAAGTAGCGGTGGTTTTTTTA CTTTAAAGCGACTTAACTCA
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MRWTPRAKPFVFCQRETLMFDDLDYNQPYASARSPVMGNNMVACSQPLAAQAGLDMLRRGGNAVDAAIAAAMVLTVVEPT GCGIGSDAFAIVWDGSKLQGLNASGRAPQAWTPEYFEGQSQMAQRGWPAVSVPGAVSAWVELSARYGKLPFATLAEPAIG YARDGYQVTPIIAELWKRGAHLLKDQPGFAECFMPGGKAPMAGEKIRLKDHARTLELIAQTKGEAFYRGELAQTIIAHAN ANGSVMSLDDLATHTVDWIDTLSVPYAGAVVHELPPNGQGIATLAGLTMLEALGVGEHPVDSLETVHPVLEAMKLALADL DEHVADSEHMRVPSADLLGKAYLTERAGLITDQAANPGHGSPKPGGTVYLSAADESGMMISFIQSNYMGFGSGVVVPGTG ISMQNRGAGFSLDPQHVNYVAPRKRPFHTIIPGFVMNADGTPLMSFGLMGGPMQAQGHLQMMMRILRYKQNPQAAADAPR WRIEAGLKVAVERAFDPEVVKALRAKGHDIDVEEPSGVFAFGGAQIIQRTAHGYVGGTDPRKDGTVAAY
Sequences:
>Translated_549_residues MRWTPRAKPFVFCQRETLMFDDLDYNQPYASARSPVMGNNMVACSQPLAAQAGLDMLRRGGNAVDAAIAAAMVLTVVEPT GCGIGSDAFAIVWDGSKLQGLNASGRAPQAWTPEYFEGQSQMAQRGWPAVSVPGAVSAWVELSARYGKLPFATLAEPAIG YARDGYQVTPIIAELWKRGAHLLKDQPGFAECFMPGGKAPMAGEKIRLKDHARTLELIAQTKGEAFYRGELAQTIIAHAN ANGSVMSLDDLATHTVDWIDTLSVPYAGAVVHELPPNGQGIATLAGLTMLEALGVGEHPVDSLETVHPVLEAMKLALADL DEHVADSEHMRVPSADLLGKAYLTERAGLITDQAANPGHGSPKPGGTVYLSAADESGMMISFIQSNYMGFGSGVVVPGTG ISMQNRGAGFSLDPQHVNYVAPRKRPFHTIIPGFVMNADGTPLMSFGLMGGPMQAQGHLQMMMRILRYKQNPQAAADAPR WRIEAGLKVAVERAFDPEVVKALRAKGHDIDVEEPSGVFAFGGAQIIQRTAHGYVGGTDPRKDGTVAAY >Mature_549_residues MRWTPRAKPFVFCQRETLMFDDLDYNQPYASARSPVMGNNMVACSQPLAAQAGLDMLRRGGNAVDAAIAAAMVLTVVEPT GCGIGSDAFAIVWDGSKLQGLNASGRAPQAWTPEYFEGQSQMAQRGWPAVSVPGAVSAWVELSARYGKLPFATLAEPAIG YARDGYQVTPIIAELWKRGAHLLKDQPGFAECFMPGGKAPMAGEKIRLKDHARTLELIAQTKGEAFYRGELAQTIIAHAN ANGSVMSLDDLATHTVDWIDTLSVPYAGAVVHELPPNGQGIATLAGLTMLEALGVGEHPVDSLETVHPVLEAMKLALADL DEHVADSEHMRVPSADLLGKAYLTERAGLITDQAANPGHGSPKPGGTVYLSAADESGMMISFIQSNYMGFGSGVVVPGTG ISMQNRGAGFSLDPQHVNYVAPRKRPFHTIIPGFVMNADGTPLMSFGLMGGPMQAQGHLQMMMRILRYKQNPQAAADAPR WRIEAGLKVAVERAFDPEVVKALRAKGHDIDVEEPSGVFAFGGAQIIQRTAHGYVGGTDPRKDGTVAAY
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=535, Percent_Identity=27.4766355140187, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI73915090, Length=535, Percent_Identity=27.4766355140187, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI73915096, Length=535, Percent_Identity=27.4766355140187, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI73915094, Length=535, Percent_Identity=27.4766355140187, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI113429324, Length=524, Percent_Identity=26.7175572519084, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI113429326, Length=529, Percent_Identity=26.4650283553875, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI153266885, Length=551, Percent_Identity=24.6823956442831, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI153266901, Length=552, Percent_Identity=24.4565217391304, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI109148539, Length=523, Percent_Identity=26.3862332695985, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI153266907, Length=547, Percent_Identity=23.5831809872029, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI30581157, Length=198, Percent_Identity=28.7878787878788, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI30581155, Length=198, Percent_Identity=28.7878787878788, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1789856, Length=538, Percent_Identity=28.4386617100372, Blast_Score=186, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17506189, Length=502, Percent_Identity=25.2988047808765, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI212646519, Length=480, Percent_Identity=24.375, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI72000294, Length=480, Percent_Identity=24.375, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI193208245, Length=478, Percent_Identity=25.9414225941423, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI193208247, Length=478, Percent_Identity=25.9414225941423, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17542894, Length=543, Percent_Identity=23.3885819521179, Blast_Score=116, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6323330, Length=454, Percent_Identity=23.1277533039648, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI18859893, Length=509, Percent_Identity=25.5402750491159, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24642670, Length=555, Percent_Identity=24.1441441441441, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24642666, Length=555, Percent_Identity=24.1441441441441, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI45551474, Length=555, Percent_Identity=24.1441441441441, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI161077878, Length=555, Percent_Identity=24.1441441441441, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI161077880, Length=555, Percent_Identity=24.1441441441441, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI161077496, Length=519, Percent_Identity=23.6994219653179, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI18859741, Length=522, Percent_Identity=23.7547892720307, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 58589; Mature: 58589
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWTPRAKPFVFCQRETLMFDDLDYNQPYASARSPVMGNNMVACSQPLAAQAGLDMLRRG CCCCCCCCCEEEEECCEEEECCCCCCCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHHCC GNAVDAAIAAAMVLTVVEPTGCGIGSDAFAIVWDGSKLQGLNASGRAPQAWTPEYFEGQS CCHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCHHHCCHH QMAQRGWPAVSVPGAVSAWVELSARYGKLPFATLAEPAIGYARDGYQVTPIIAELWKRGA HHHHCCCCCEECCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEECHHHHHHHHCCH HLLKDQPGFAECFMPGGKAPMAGEKIRLKDHARTLELIAQTKGEAFYRGELAQTIIAHAN HHHCCCCCHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCC ANGSVMSLDDLATHTVDWIDTLSVPYAGAVVHELPPNGQGIATLAGLTMLEALGVGEHPV CCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCH DSLETVHPVLEAMKLALADLDEHVADSEHMRVPSADLLGKAYLTERAGLITDQAANPGHG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCC SPKPGGTVYLSAADESGMMISFIQSNYMGFGSGVVVPGTGISMQNRGAGFSLDPQHVNYV CCCCCCEEEEEECCCCCCEEEEEHHCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCEE APRKRPFHTIIPGFVMNADGTPLMSFGLMGGPMQAQGHLQMMMRILRYKQNPQAAADAPR CCCCCCCCEECCCEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCC WRIEAGLKVAVERAFDPEVVKALRAKGHDIDVEEPSGVFAFGGAQIIQRTAHGYVGGTDP EEECCCCEEEEHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCC RKDGTVAAY CCCCCEECC >Mature Secondary Structure MRWTPRAKPFVFCQRETLMFDDLDYNQPYASARSPVMGNNMVACSQPLAAQAGLDMLRRG CCCCCCCCCEEEEECCEEEECCCCCCCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHHCC GNAVDAAIAAAMVLTVVEPTGCGIGSDAFAIVWDGSKLQGLNASGRAPQAWTPEYFEGQS CCHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCHHHCCHH QMAQRGWPAVSVPGAVSAWVELSARYGKLPFATLAEPAIGYARDGYQVTPIIAELWKRGA HHHHCCCCCEECCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEECHHHHHHHHCCH HLLKDQPGFAECFMPGGKAPMAGEKIRLKDHARTLELIAQTKGEAFYRGELAQTIIAHAN HHHCCCCCHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCC ANGSVMSLDDLATHTVDWIDTLSVPYAGAVVHELPPNGQGIATLAGLTMLEALGVGEHPV CCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCH DSLETVHPVLEAMKLALADLDEHVADSEHMRVPSADLLGKAYLTERAGLITDQAANPGHG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCC SPKPGGTVYLSAADESGMMISFIQSNYMGFGSGVVVPGTGISMQNRGAGFSLDPQHVNYV CCCCCCEEEEEECCCCCCEEEEEHHCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCEE APRKRPFHTIIPGFVMNADGTPLMSFGLMGGPMQAQGHLQMMMRILRYKQNPQAAADAPR CCCCCCCCEECCCEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCC WRIEAGLKVAVERAFDPEVVKALRAKGHDIDVEEPSGVFAFGGAQIIQRTAHGYVGGTDP EEECCCCEEEEHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCC RKDGTVAAY CCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]