| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045883
Identifier: 66045883
GI number: 66045883
Start: 3218352
End: 3219233
Strand: Direct
Name: 66045883
Synonym: Psyr_2647
Alternate gene names: NA
Gene position: 3218352-3219233 (Clockwise)
Preceding gene: 66045882
Following gene: 66045884
Centisome position: 52.81
GC content: 54.76
Gene sequence:
>882_bases TTGAGTTGGTCTGATGACCCCTACCGCTATGTCGATCCTCGACTCGATGAAGGGCTGGCATGGTGGGGCGCAGATGTTCA ATATCAGGACATGGCCAAGGCTCGTAAGCGTAGAGGAAAGTTGTTGTTGGCGCTCAACGATACGTGGACTTTGCAAAGCT GGAGCGAGTGGCTAGCGCGAACCCCTCATCATGAAGATATCGTCGTCCTCCACGTCGATGATCATAAAGACTTGGATGCG CCTCGCTTCTTCAACCGTCCGGATGGCTGGTTTGATCCCATCGGTTGCCGACCTGTCGACCTGCATGTGCCGCATTCAGT AACAGATGCCATCATGAGTGGAGCACTGGGCATGGGAAGTTTCCTGACACCCTTTCTGCACAGGCATCCCGACACCGAGG TGCGACAGCTCTGCCAAGGGCCCAAATGCACTCGAACTATCGACTCGCAGATCATACTGGAGTCGGTGGCTGATACCTTG CTTGACCCGTCCGCTTTGCGTCCCGCTGTTTCACTCATCGCTGATGATCAGGGGACTGGGAATGGTCGGTACCGATTTAC CCATGACCTTGATTTATGGCTTGAAGGCCTGTCGAAAACTTGCGCTCCCATTCTTCTTCACGTGGACATGGATTACTTCT GCAACCGGTACGATGGAGATAGCGATCACATTGATCATCCCGGCCCGCTAAATGATGCGCTGCCGCAGATTCTGAGCAGC ATCGATGCACTGACCAAAGCGTTACACCGGCACGGCCTGGCCGAACGACTCGTTGATATCGTTATCGCGTTTTCCCCTGG GTTTTTCCCCGCGGAATTCTGGGCTGAGAGCTGTGATCGGCTTCTGATTGGTCTGGGAGAGCAGCCGTGGGGCGATCAGT GA
Upstream 100 bases:
>100_bases CCTGTCGGCTGATCTGCGTCAGAGGCATGCCCAGCTTCGCGATTACTTTTGTGACAAGGACGCGCAAGCAAACTGTATTG ATGGGCAGTGGGCACTGGCT
Downstream 100 bases:
>100_bases GTACTCCAAGATCCAAGGTAACAGCGCGGACGACTCCTAAGCCCCCTTCGGTGAAAGCAAAGTCTAGACTCGGCCCGGTA TTGCCGGAAGATCTGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSWSDDPYRYVDPRLDEGLAWWGADVQYQDMAKARKRRGKLLLALNDTWTLQSWSEWLARTPHHEDIVVLHVDDHKDLDA PRFFNRPDGWFDPIGCRPVDLHVPHSVTDAIMSGALGMGSFLTPFLHRHPDTEVRQLCQGPKCTRTIDSQIILESVADTL LDPSALRPAVSLIADDQGTGNGRYRFTHDLDLWLEGLSKTCAPILLHVDMDYFCNRYDGDSDHIDHPGPLNDALPQILSS IDALTKALHRHGLAERLVDIVIAFSPGFFPAEFWAESCDRLLIGLGEQPWGDQ
Sequences:
>Translated_293_residues MSWSDDPYRYVDPRLDEGLAWWGADVQYQDMAKARKRRGKLLLALNDTWTLQSWSEWLARTPHHEDIVVLHVDDHKDLDA PRFFNRPDGWFDPIGCRPVDLHVPHSVTDAIMSGALGMGSFLTPFLHRHPDTEVRQLCQGPKCTRTIDSQIILESVADTL LDPSALRPAVSLIADDQGTGNGRYRFTHDLDLWLEGLSKTCAPILLHVDMDYFCNRYDGDSDHIDHPGPLNDALPQILSS IDALTKALHRHGLAERLVDIVIAFSPGFFPAEFWAESCDRLLIGLGEQPWGDQ >Mature_292_residues SWSDDPYRYVDPRLDEGLAWWGADVQYQDMAKARKRRGKLLLALNDTWTLQSWSEWLARTPHHEDIVVLHVDDHKDLDAP RFFNRPDGWFDPIGCRPVDLHVPHSVTDAIMSGALGMGSFLTPFLHRHPDTEVRQLCQGPKCTRTIDSQIILESVADTLL DPSALRPAVSLIADDQGTGNGRYRFTHDLDLWLEGLSKTCAPILLHVDMDYFCNRYDGDSDHIDHPGPLNDALPQILSSI DALTKALHRHGLAERLVDIVIAFSPGFFPAEFWAESCDRLLIGLGEQPWGDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33126; Mature: 32994
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWSDDPYRYVDPRLDEGLAWWGADVQYQDMAKARKRRGKLLLALNDTWTLQSWSEWLAR CCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHC TPHHEDIVVLHVDDHKDLDAPRFFNRPDGWFDPIGCRPVDLHVPHSVTDAIMSGALGMGS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHH FLTPFLHRHPDTEVRQLCQGPKCTRTIDSQIILESVADTLLDPSALRPAVSLIADDQGTG HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC NGRYRFTHDLDLWLEGLSKTCAPILLHVDMDYFCNRYDGDSDHIDHPGPLNDALPQILSS CCCEEEECHHHHHHHHHHHHHHHEEEEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH IDALTKALHRHGLAERLVDIVIAFSPGFFPAEFWAESCDRLLIGLGEQPWGDQ HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SWSDDPYRYVDPRLDEGLAWWGADVQYQDMAKARKRRGKLLLALNDTWTLQSWSEWLAR CCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHC TPHHEDIVVLHVDDHKDLDAPRFFNRPDGWFDPIGCRPVDLHVPHSVTDAIMSGALGMGS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHH FLTPFLHRHPDTEVRQLCQGPKCTRTIDSQIILESVADTLLDPSALRPAVSLIADDQGTG HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC NGRYRFTHDLDLWLEGLSKTCAPILLHVDMDYFCNRYDGDSDHIDHPGPLNDALPQILSS CCCEEEECHHHHHHHHHHHHHHHEEEEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH IDALTKALHRHGLAERLVDIVIAFSPGFFPAEFWAESCDRLLIGLGEQPWGDQ HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA