| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045884
Identifier: 66045884
GI number: 66045884
Start: 3219218
End: 3220411
Strand: Direct
Name: 66045884
Synonym: Psyr_2648
Alternate gene names: NA
Gene position: 3219218-3220411 (Clockwise)
Preceding gene: 66045883
Following gene: 66045885
Centisome position: 52.83
GC content: 54.69
Gene sequence:
>1194_bases GTGGGGCGATCAGTGAGTACTCCAAGATCCAAGGTAACAGCGCGGACGACTCCTAAGCCCCCTTCGGTGAAAGCAAAGTC TAGACTCGGCCCGGTATTGCCGGAAGATCTGGAGTTTACGCGCACCCCGGGAAGCCGCGAGCGCGGCGGAGGGCCTGGGG GAGAAGCTTGGGTCATCTCGGTTAAAGGCAAGCGGGCGGGCATCGCATACATTAATCTGGTGAAGGACGAGGTTCGAGGC CGCCACGCGTCGTTCCATGTCTTCCTCAACCGACCAAGCCAAGGGCGACAGATTGGCCGGAGCGCTTACCAGTATTGCTG TCAGAACAGCCAATACGATGTCATCTACGCGCACATGCGTAAGTCCAACTTGGCGTCACGCAAGGCGGCTGAGCATGCCG GGTTCATAGAGGCGCCGGTAGGCGACTCCCAACTCGTCCTGGTCTGGTATCGAGATAATAACCGACCTGCCAAACCTGAA TGCGCAGAGGTCTCTTCAGACAGGCACGACAAGGGTGCGCACGAACATGTCACTCAGACTCAACCTACTACAGCGGTGAG AACTTTCGACGAGGTGCCTGTGAGTTCGTTGGAGCTGCAGTTTGACGAAAAAAACAGCGATGTCCTTGTCTGGAACGGTC AGGTAGTTATGTCACGTACTGAAGAAGCGTACTTTGAAATGCTTTTTTCCAGGCTTGGATACCTCAATCCTCGCACTGTA CTTGAGATAGGGTTTGGCTTAGGAATCTCCGCTACGTTGATCCAGCAGTACCTCAAACCTGAGCGTCACGCCATTTTTGA AATAGAGACCACCATCTACCAAGACCTGCTAGCTTTCTCCCAGCGCCATCCTTCAGTGCAACCGTTTTGCGGTGACTGGA ACCGCTGTCACATCGCAGGGAACTACGACTTCATTTTCTTCGACCCCTTTGACTATCACATGGAGGAGGGCGCTCAAGTT GAAGGGCTTCACTGTGAGAAGGCTCAGCGAGCGACCCGAGCTCTGAAAATGCGGGCGCTGTTGAATCCTAATGGTGTTCT CTGCCATCCGCATTTCGGCGATGGCGATGTGCCTGAACTCCCCGGATTTGCGACTGTGATTGTCGAACGGGCGAAAGTTT CACCCATCCGGATGGCGGATGAGACGCTGTGTGAGGATGTGGCAATCGTCTATCACAAGCCTCTCGATTGCTGA
Upstream 100 bases:
>100_bases GACTCGTTGATATCGTTATCGCGTTTTCCCCTGGGTTTTTCCCCGCGGAATTCTGGGCTGAGAGCTGTGATCGGCTTCTG ATTGGTCTGGGAGAGCAGCC
Downstream 100 bases:
>100_bases TCCGGGCCTCGGTCAGCGCGTTCTTATGACCAGACGCTGGCACGGCTTTTTGGAGAAAGATTCGTCGTACGCTTTTTCAG AATGCCTCGATGGCAACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MGRSVSTPRSKVTARTTPKPPSVKAKSRLGPVLPEDLEFTRTPGSRERGGGPGGEAWVISVKGKRAGIAYINLVKDEVRG RHASFHVFLNRPSQGRQIGRSAYQYCCQNSQYDVIYAHMRKSNLASRKAAEHAGFIEAPVGDSQLVLVWYRDNNRPAKPE CAEVSSDRHDKGAHEHVTQTQPTTAVRTFDEVPVSSLELQFDEKNSDVLVWNGQVVMSRTEEAYFEMLFSRLGYLNPRTV LEIGFGLGISATLIQQYLKPERHAIFEIETTIYQDLLAFSQRHPSVQPFCGDWNRCHIAGNYDFIFFDPFDYHMEEGAQV EGLHCEKAQRATRALKMRALLNPNGVLCHPHFGDGDVPELPGFATVIVERAKVSPIRMADETLCEDVAIVYHKPLDC
Sequences:
>Translated_397_residues MGRSVSTPRSKVTARTTPKPPSVKAKSRLGPVLPEDLEFTRTPGSRERGGGPGGEAWVISVKGKRAGIAYINLVKDEVRG RHASFHVFLNRPSQGRQIGRSAYQYCCQNSQYDVIYAHMRKSNLASRKAAEHAGFIEAPVGDSQLVLVWYRDNNRPAKPE CAEVSSDRHDKGAHEHVTQTQPTTAVRTFDEVPVSSLELQFDEKNSDVLVWNGQVVMSRTEEAYFEMLFSRLGYLNPRTV LEIGFGLGISATLIQQYLKPERHAIFEIETTIYQDLLAFSQRHPSVQPFCGDWNRCHIAGNYDFIFFDPFDYHMEEGAQV EGLHCEKAQRATRALKMRALLNPNGVLCHPHFGDGDVPELPGFATVIVERAKVSPIRMADETLCEDVAIVYHKPLDC >Mature_396_residues GRSVSTPRSKVTARTTPKPPSVKAKSRLGPVLPEDLEFTRTPGSRERGGGPGGEAWVISVKGKRAGIAYINLVKDEVRGR HASFHVFLNRPSQGRQIGRSAYQYCCQNSQYDVIYAHMRKSNLASRKAAEHAGFIEAPVGDSQLVLVWYRDNNRPAKPEC AEVSSDRHDKGAHEHVTQTQPTTAVRTFDEVPVSSLELQFDEKNSDVLVWNGQVVMSRTEEAYFEMLFSRLGYLNPRTVL EIGFGLGISATLIQQYLKPERHAIFEIETTIYQDLLAFSQRHPSVQPFCGDWNRCHIAGNYDFIFFDPFDYHMEEGAQVE GLHCEKAQRATRALKMRALLNPNGVLCHPHFGDGDVPELPGFATVIVERAKVSPIRMADETLCEDVAIVYHKPLDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44529; Mature: 44398
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRSVSTPRSKVTARTTPKPPSVKAKSRLGPVLPEDLEFTRTPGSRERGGGPGGEAWVIS CCCCCCCCHHHEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE VKGKRAGIAYINLVKDEVRGRHASFHVFLNRPSQGRQIGRSAYQYCCQNSQYDVIYAHMR ECCCCCCEEEEEEEHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEH KSNLASRKAAEHAGFIEAPVGDSQLVLVWYRDNNRPAKPECAEVSSDRHDKGAHEHVTQT HHHHHHHHHHHHCCEEECCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCCCHHHCCCC QPTTAVRTFDEVPVSSLELQFDEKNSDVLVWNGQVVMSRTEEAYFEMLFSRLGYLNPRTV CCCHHHHHHHCCCCCEEEEEECCCCCCEEEECCEEEEECHHHHHHHHHHHHHCCCCCCEE LEIGFGLGISATLIQQYLKPERHAIFEIETTIYQDLLAFSQRHPSVQPFCGDWNRCHIAG EEECCCCCHHHHHHHHHHCCCHHEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC NYDFIFFDPFDYHMEEGAQVEGLHCEKAQRATRALKMRALLNPNGVLCHPHFGDGDVPEL CCCEEEECCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCC PGFATVIVERAKVSPIRMADETLCEDVAIVYHKPLDC CCHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure GRSVSTPRSKVTARTTPKPPSVKAKSRLGPVLPEDLEFTRTPGSRERGGGPGGEAWVIS CCCCCCCHHHEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE VKGKRAGIAYINLVKDEVRGRHASFHVFLNRPSQGRQIGRSAYQYCCQNSQYDVIYAHMR ECCCCCCEEEEEEEHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEH KSNLASRKAAEHAGFIEAPVGDSQLVLVWYRDNNRPAKPECAEVSSDRHDKGAHEHVTQT HHHHHHHHHHHHCCEEECCCCCCEEEEEEEECCCCCCCCHHHHCCCCCCCCCCHHHCCCC QPTTAVRTFDEVPVSSLELQFDEKNSDVLVWNGQVVMSRTEEAYFEMLFSRLGYLNPRTV CCCHHHHHHHCCCCCEEEEEECCCCCCEEEECCEEEEECHHHHHHHHHHHHHCCCCCCEE LEIGFGLGISATLIQQYLKPERHAIFEIETTIYQDLLAFSQRHPSVQPFCGDWNRCHIAG EEECCCCCHHHHHHHHHHCCCHHEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC NYDFIFFDPFDYHMEEGAQVEGLHCEKAQRATRALKMRALLNPNGVLCHPHFGDGDVPEL CCCEEEECCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCCCC PGFATVIVERAKVSPIRMADETLCEDVAIVYHKPLDC CCHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA