| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is dhaK [H]
Identifier: 66045802
GI number: 66045802
Start: 2979654
End: 2980655
Strand: Reverse
Name: dhaK [H]
Synonym: Psyr_2566
Alternate gene names: 66045802
Gene position: 2980655-2979654 (Counterclockwise)
Preceding gene: 66045803
Following gene: 66045801
Centisome position: 48.91
GC content: 61.78
Gene sequence:
>1002_bases ATGAACCGAGTGATAAACGATCCGGACCAGGTGGTCGAGGACATGCTGCGCGGCATTCTGGTAGCGCACCCCGAGCTGTC GCAAAGTGAAGGTAACCCGCGGGTCATCAGCAAAACCCGTCCCTCTGATCAAGGACGCGTCGGTATCGTTACCGGCGGCG GCTCGGGTCATGAACCGGCCTTTCTTGGCTATGTCGGCCCTGGGCTGGTGGATGCGGTAGCGGTCGGCGAGATTTTTTCC TCGCCTACGGCCAAGAGCTTTTTCGACGCCTTCCGCGCGGCCGATCACGGTGCGGGCATCGCCTGCCTGTACGGCAACTA CGCGGGCGACAACATGAACGTGAAGCTGGCGATGAAAATGGCCGCCAGCAAAGACCTGCAAGTGCGTACCGTGGTGGCCA ACGACGATGTGGCCTCGGCACCGAAATCCGATATCGCCAAGCGACGCGGAGTGGCCGGGGAAATTTTCATGTGGAAGATC GGCGGCGCTGCGGCCGCAAACGGTTACGATCTGGACGGCGTGATCCGCGTCGCGCAGAAGGCCGTGGATCAATGCCGATC CATCGGTATCGGCCTGACGCCCTGCACCATCGCGGCGGTCGGCAAGCCCAACTTTCAGATCCCCGACGGCAAAATGGAGC TGGGCATCGGTCACCATGGCGAACCGGGTATCGAAGTCATCGACATCGAGCCTGCAGCGGCCATGGCCGAGCGCATGCTG GAGCCGATCCTGGCCGACCGGGATTTCAGCGTGGACGACAGCGTAGTCGTGCTGGTTTCAGGCCTCGGTGCCACGCCGGT GATGGAACTCTACGTGTTCTACGCCGAAGTGGAGCGCCTGCTCAAGGCCCGGGGCTTGAAAATCCATCGTTGCTACGTGG GCAATTACTTCACGTCGCTGGAGATGATGGGGGTAACCCTGACGCTGCTGGGCCTGGACGCCGAACTGAAAACCCTGATC GACCACCCTTGCCGGTCCATCGGCATGACCCAGGCGGAGTAA
Upstream 100 bases:
>100_bases GAGGCGTTTGCCGTCATGGAACGCGGTGATAAATCATTGAAGGTGGTTCTGGAACCCTGATCCGCCCGATCCTTATAAAA AGAACACAGGAAATCGCGTT
Downstream 100 bases:
>100_bases ACCATGAGCGAGCAATTCTCTACGCATCTCCCTGCACAACAGGGCACTCCTATCGTTGCCGACCTGGTGAGCGTGATCGT CGCCAACCGCGACTACCTCA
Product: Glycerone kinase
Products: ADP; glycerone phosphate
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNRVINDPDQVVEDMLRGILVAHPELSQSEGNPRVISKTRPSDQGRVGIVTGGGSGHEPAFLGYVGPGLVDAVAVGEIFS SPTAKSFFDAFRAADHGAGIACLYGNYAGDNMNVKLAMKMAASKDLQVRTVVANDDVASAPKSDIAKRRGVAGEIFMWKI GGAAAANGYDLDGVIRVAQKAVDQCRSIGIGLTPCTIAAVGKPNFQIPDGKMELGIGHHGEPGIEVIDIEPAAAMAERML EPILADRDFSVDDSVVVLVSGLGATPVMELYVFYAEVERLLKARGLKIHRCYVGNYFTSLEMMGVTLTLLGLDAELKTLI DHPCRSIGMTQAE
Sequences:
>Translated_333_residues MNRVINDPDQVVEDMLRGILVAHPELSQSEGNPRVISKTRPSDQGRVGIVTGGGSGHEPAFLGYVGPGLVDAVAVGEIFS SPTAKSFFDAFRAADHGAGIACLYGNYAGDNMNVKLAMKMAASKDLQVRTVVANDDVASAPKSDIAKRRGVAGEIFMWKI GGAAAANGYDLDGVIRVAQKAVDQCRSIGIGLTPCTIAAVGKPNFQIPDGKMELGIGHHGEPGIEVIDIEPAAAMAERML EPILADRDFSVDDSVVVLVSGLGATPVMELYVFYAEVERLLKARGLKIHRCYVGNYFTSLEMMGVTLTLLGLDAELKTLI DHPCRSIGMTQAE >Mature_333_residues MNRVINDPDQVVEDMLRGILVAHPELSQSEGNPRVISKTRPSDQGRVGIVTGGGSGHEPAFLGYVGPGLVDAVAVGEIFS SPTAKSFFDAFRAADHGAGIACLYGNYAGDNMNVKLAMKMAASKDLQVRTVVANDDVASAPKSDIAKRRGVAGEIFMWKI GGAAAANGYDLDGVIRVAQKAVDQCRSIGIGLTPCTIAAVGKPNFQIPDGKMELGIGHHGEPGIEVIDIEPAAAMAERML EPILADRDFSVDDSVVVLVSGLGATPVMELYVFYAEVERLLKARGLKIHRCYVGNYFTSLEMMGVTLTLLGLDAELKTLI DHPCRSIGMTQAE
Specific function: Dihydroxyacetone binding subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone [H]
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaK domain [H]
Homologues:
Organism=Homo sapiens, GI20149621, Length=327, Percent_Identity=32.7217125382263, Blast_Score=173, Evalue=2e-43, Organism=Escherichia coli, GI87081857, Length=350, Percent_Identity=35.4285714285714, Blast_Score=217, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17565018, Length=331, Percent_Identity=31.1178247734139, Blast_Score=163, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6323570, Length=330, Percent_Identity=31.5151515151515, Blast_Score=146, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6321055, Length=338, Percent_Identity=30.4733727810651, Blast_Score=145, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004006 - InterPro: IPR012736 [H]
Pfam domain/function: PF02733 Dak1 [H]
EC number: 2.7.1.29
Molecular weight: Translated: 35342; Mature: 35342
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVINDPDQVVEDMLRGILVAHPELSQSEGNPRVISKTRPSDQGRVGIVTGGGSGHEPA CCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCE FLGYVGPGLVDAVAVGEIFSSPTAKSFFDAFRAADHGAGIACLYGNYAGDNMNVKLAMKM EEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEE AASKDLQVRTVVANDDVASAPKSDIAKRRGVAGEIFMWKIGGAAAANGYDLDGVIRVAQK CCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH AVDQCRSIGIGLTPCTIAAVGKPNFQIPDGKMELGIGHHGEPGIEVIDIEPAAAMAERML HHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHH EPILADRDFSVDDSVVVLVSGLGATPVMELYVFYAEVERLLKARGLKIHRCYVGNYFTSL HHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHH EMMGVTLTLLGLDAELKTLIDHPCRSIGMTQAE HHHCEEEEEEECCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNRVINDPDQVVEDMLRGILVAHPELSQSEGNPRVISKTRPSDQGRVGIVTGGGSGHEPA CCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCE FLGYVGPGLVDAVAVGEIFSSPTAKSFFDAFRAADHGAGIACLYGNYAGDNMNVKLAMKM EEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEE AASKDLQVRTVVANDDVASAPKSDIAKRRGVAGEIFMWKIGGAAAANGYDLDGVIRVAQK CCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH AVDQCRSIGIGLTPCTIAAVGKPNFQIPDGKMELGIGHHGEPGIEVIDIEPAAAMAERML HHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHH EPILADRDFSVDDSVVVLVSGLGATPVMELYVFYAEVERLLKARGLKIHRCYVGNYFTSL HHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHH EMMGVTLTLLGLDAELKTLIDHPCRSIGMTQAE HHHCEEEEEEECCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; glycerone
Specific reaction: ATP + glycerone = ADP + glycerone phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11337471 [H]