| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ycgS [C]
Identifier: 66045801
GI number: 66045801
Start: 2978988
End: 2979650
Strand: Reverse
Name: ycgS [C]
Synonym: Psyr_2565
Alternate gene names: 66045801
Gene position: 2979650-2978988 (Counterclockwise)
Preceding gene: 66045802
Following gene: 66045784
Centisome position: 48.9
GC content: 63.95
Gene sequence:
>663_bases ATGAGCGAGCAATTCTCTACGCATCTCCCTGCACAACAGGGCACTCCTATCGTTGCCGACCTGGTGAGCGTGATCGTCGC CAACCGCGACTACCTCAGCGAAGTGGATGGCGCGATCGGTGACGGCGACCATGGCATCAACATGGCCAAGGGCTTCGCCC ACTGTGGTCGTACCATCGAAGGCCGCCAACTGAGCCTCGCCGAAGCGCTGGACGAACTGACCCTGAGCCTGATGGAAGGC ATCGGCGGCTCGATGGGCCCGCTGTACGGCAGTCTGTTCATCGGCATGGCCGATCAGGTGCGCGGCTGCGAACAGATCGA CGCCGCGGCCTTCGCCAGCCTGCTGCGCGGCGGTCTCACCTCACTGCAGGACATCACCGAAGCCGGGGTCGGCGACAAAT GCTTGATGGATACCTTGATTCCGGCCGTCGAAGCCTTCGAGCAGGCCCACGCCCGGGGTGAATCGTTCAGCGCAGCGCTC GATGCGATGAAAAGCGCCGCATCACAAGGGCGCGACTCCACCCGTGATCTGGTGGCGAAGATAGGCCGGGCGAGTCGCCT CGGCGAACGGTCGCTCGGCGTGCTGGATGCAGGCGCGGTGTCGTGCTGCCTGATACTGACGCAACTGGCGGATTCGGTGC AGCCGAGGCTGACAGACAGCTAA
Upstream 100 bases:
>100_bases GATGGGGGTAACCCTGACGCTGCTGGGCCTGGACGCCGAACTGAAAACCCTGATCGACCACCCTTGCCGGTCCATCGGCA TGACCCAGGCGGAGTAAACC
Downstream 100 bases:
>100_bases AGCACCGCGCCATCAAAGCTCGAATCGAATCCGCCGCTCGCGGCGCTGTGCTTCCGGCAGCGCCTCGCCGCGCGGGCCAT CCTGAGCGCAGGTCTATACA
Product: Dak phosphatase
Products: ADP; glycerone phosphate
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSEQFSTHLPAQQGTPIVADLVSVIVANRDYLSEVDGAIGDGDHGINMAKGFAHCGRTIEGRQLSLAEALDELTLSLMEG IGGSMGPLYGSLFIGMADQVRGCEQIDAAAFASLLRGGLTSLQDITEAGVGDKCLMDTLIPAVEAFEQAHARGESFSAAL DAMKSAASQGRDSTRDLVAKIGRASRLGERSLGVLDAGAVSCCLILTQLADSVQPRLTDS
Sequences:
>Translated_220_residues MSEQFSTHLPAQQGTPIVADLVSVIVANRDYLSEVDGAIGDGDHGINMAKGFAHCGRTIEGRQLSLAEALDELTLSLMEG IGGSMGPLYGSLFIGMADQVRGCEQIDAAAFASLLRGGLTSLQDITEAGVGDKCLMDTLIPAVEAFEQAHARGESFSAAL DAMKSAASQGRDSTRDLVAKIGRASRLGERSLGVLDAGAVSCCLILTQLADSVQPRLTDS >Mature_219_residues SEQFSTHLPAQQGTPIVADLVSVIVANRDYLSEVDGAIGDGDHGINMAKGFAHCGRTIEGRQLSLAEALDELTLSLMEGI GGSMGPLYGSLFIGMADQVRGCEQIDAAAFASLLRGGLTSLQDITEAGVGDKCLMDTLIPAVEAFEQAHARGESFSAALD AMKSAASQGRDSTRDLVAKIGRASRLGERSLGVLDAGAVSCCLILTQLADSVQPRLTDS
Specific function: Unknown
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
Organism=Escherichia coli, GI1787449, Length=182, Percent_Identity=32.967032967033, Blast_Score=94, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR012737 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: 2.7.1.29
Molecular weight: Translated: 22885; Mature: 22754
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQFSTHLPAQQGTPIVADLVSVIVANRDYLSEVDGAIGDGDHGINMAKGFAHCGRTIE CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC GRQLSLAEALDELTLSLMEGIGGSMGPLYGSLFIGMADQVRGCEQIDAAAFASLLRGGLT CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SLQDITEAGVGDKCLMDTLIPAVEAFEQAHARGESFSAALDAMKSAASQGRDSTRDLVAK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH IGRASRLGERSLGVLDAGAVSCCLILTQLADSVQPRLTDS HHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEQFSTHLPAQQGTPIVADLVSVIVANRDYLSEVDGAIGDGDHGINMAKGFAHCGRTIE CCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC GRQLSLAEALDELTLSLMEGIGGSMGPLYGSLFIGMADQVRGCEQIDAAAFASLLRGGLT CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SLQDITEAGVGDKCLMDTLIPAVEAFEQAHARGESFSAALDAMKSAASQGRDSTRDLVAK HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH IGRASRLGERSLGVLDAGAVSCCLILTQLADSVQPRLTDS HHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; glycerone
Specific reaction: ATP + glycerone = ADP + glycerone phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7703858 [H]