| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gutB [H]
Identifier: 66045803
GI number: 66045803
Start: 2980696
End: 2981811
Strand: Reverse
Name: gutB [H]
Synonym: Psyr_2567
Alternate gene names: 66045803
Gene position: 2981811-2980696 (Counterclockwise)
Preceding gene: 66045804
Following gene: 66045802
Centisome position: 48.93
GC content: 60.93
Gene sequence:
>1116_bases ATGTCCACCGTCACCGAACGCACTGCCGAACAACTTTCACCGGTCATCCCGAAAACCATGCAGGCCGTGGTCTGCCACGG TCCGGAAGACTACCGGCTGGAAACCGTGGATGTGCCGACTCCCGGCCCCGACGAAATCCTCACCAAGGTCGAGCTGTGTG GCATCTGCATGGGCGACATCAAGACCTATCGCGGCGCGCCCTCGTTCTGGGGCGATGCCGAGCAGCCTCGCTACGTCAAA CCACCGATGATTCCCGGCCATGAATTCGTCTGTCGCGTGGTGGCGCTCGGCCCTGGCGCCGAAAAGCGTGGCGTGCAGAT CGGCGACCGGGTGATCTCCGAGCAGATCGTGCCGTGCTGGGGCTGCCGCTTCTGTAACCACGGACAGTACTGGATGTGCC AGAAGCACGACCTTTACGGCTTTCAGAACAACGTGCAGGGCGCCATGGCCCAGTACATGATTTTTACCAGGGAAGGCATC ATTCACAAGGTGCCCGACTCGATTGCCCCGGACGAAGCCATCCTCATCGAACCACTGGCCTGCTCGCTGCACGCAGCCGA ACGGGCCGACGTCGATTTCGACGACATTGTGGTCGTCGCCGGTGCCGGCACACTGGGCCTTGGGATCATTGGCGCGGTGC GCATGCGTAACCCGAAAAAACTCATCGTTCTCGACATGAAGCCCGAGCGCGCCGCCCTCGCCCTGCGCATGGGCGCCGAT GAGGTGTGGAACCCGGCCGAGGTCGACGTGCTGGCGAAGATCCGCGAGATAACCGACGGCTACGGTTGCGACATCTATAT AGAAGCCACCGGACACCACAAGGCGGTCAACCAAGGCCTGGCGATGCTGCGCAAACTCGGACGCTTTGTGGAGTTCAGCG TATTCAACGATGAGGCCACGGTGGACTGGTCGATCATCGGTGACCGCAAGGAGCTGGACGTGCTCGGTTCTCACCTCGGC CCTTACATGTACCCGCGCGCCATCGACTTTATCGGCAACCGCAAGATCGACATGCGCGACGTCGTCACGCACAAATTTCC CCTGGCGCAGTTCAAGGAGGCGTTTGCCGTCATGGAACGCGGTGATAAATCATTGAAGGTGGTTCTGGAACCCTGA
Upstream 100 bases:
>100_bases TGCTCAGCGACGCCGCCAGCATGATCACCGGCGAAAACGTAGTGATCGACGGCGGCTACAGCATCCAGTAATTCATTTTT CTGTCGTGAGGTTCATCGTC
Downstream 100 bases:
>100_bases TCCGCCCGATCCTTATAAAAAGAACACAGGAAATCGCGTTATGAACCGAGTGATAAACGATCCGGACCAGGTGGTCGAGG ACATGCTGCGCGGCATTCTG
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSTVTERTAEQLSPVIPKTMQAVVCHGPEDYRLETVDVPTPGPDEILTKVELCGICMGDIKTYRGAPSFWGDAEQPRYVK PPMIPGHEFVCRVVALGPGAEKRGVQIGDRVISEQIVPCWGCRFCNHGQYWMCQKHDLYGFQNNVQGAMAQYMIFTREGI IHKVPDSIAPDEAILIEPLACSLHAAERADVDFDDIVVVAGAGTLGLGIIGAVRMRNPKKLIVLDMKPERAALALRMGAD EVWNPAEVDVLAKIREITDGYGCDIYIEATGHHKAVNQGLAMLRKLGRFVEFSVFNDEATVDWSIIGDRKELDVLGSHLG PYMYPRAIDFIGNRKIDMRDVVTHKFPLAQFKEAFAVMERGDKSLKVVLEP
Sequences:
>Translated_371_residues MSTVTERTAEQLSPVIPKTMQAVVCHGPEDYRLETVDVPTPGPDEILTKVELCGICMGDIKTYRGAPSFWGDAEQPRYVK PPMIPGHEFVCRVVALGPGAEKRGVQIGDRVISEQIVPCWGCRFCNHGQYWMCQKHDLYGFQNNVQGAMAQYMIFTREGI IHKVPDSIAPDEAILIEPLACSLHAAERADVDFDDIVVVAGAGTLGLGIIGAVRMRNPKKLIVLDMKPERAALALRMGAD EVWNPAEVDVLAKIREITDGYGCDIYIEATGHHKAVNQGLAMLRKLGRFVEFSVFNDEATVDWSIIGDRKELDVLGSHLG PYMYPRAIDFIGNRKIDMRDVVTHKFPLAQFKEAFAVMERGDKSLKVVLEP >Mature_370_residues STVTERTAEQLSPVIPKTMQAVVCHGPEDYRLETVDVPTPGPDEILTKVELCGICMGDIKTYRGAPSFWGDAEQPRYVKP PMIPGHEFVCRVVALGPGAEKRGVQIGDRVISEQIVPCWGCRFCNHGQYWMCQKHDLYGFQNNVQGAMAQYMIFTREGII HKVPDSIAPDEAILIEPLACSLHAAERADVDFDDIVVVAGAGTLGLGIIGAVRMRNPKKLIVLDMKPERAALALRMGADE VWNPAEVDVLAKIREITDGYGCDIYIEATGHHKAVNQGLAMLRKLGRFVEFSVFNDEATVDWSIIGDRKELDVLGSHLGP YMYPRAIDFIGNRKIDMRDVVTHKFPLAQFKEAFAVMERGDKSLKVVLEP
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=352, Percent_Identity=27.8409090909091, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI4501929, Length=383, Percent_Identity=23.7597911227154, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4501933, Length=384, Percent_Identity=23.1770833333333, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1788073, Length=334, Percent_Identity=29.6407185628743, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1790045, Length=339, Percent_Identity=27.4336283185841, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1787863, Length=353, Percent_Identity=27.1954674220963, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI226510992, Length=339, Percent_Identity=27.1386430678466, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI87082125, Length=361, Percent_Identity=27.9778393351801, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788407, Length=338, Percent_Identity=23.9644970414201, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1788075, Length=367, Percent_Identity=25.3405994550409, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786825, Length=409, Percent_Identity=25.9168704156479, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790718, Length=344, Percent_Identity=25.2906976744186, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562876, Length=345, Percent_Identity=28.9855072463768, Blast_Score=147, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17562878, Length=351, Percent_Identity=28.2051282051282, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71988145, Length=368, Percent_Identity=25.8152173913043, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562584, Length=366, Percent_Identity=25.1366120218579, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6323099, Length=344, Percent_Identity=26.1627906976744, Blast_Score=105, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6322619, Length=344, Percent_Identity=25, Blast_Score=100, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6319257, Length=275, Percent_Identity=29.0909090909091, Blast_Score=100, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6319955, Length=344, Percent_Identity=25, Blast_Score=100, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6319258, Length=286, Percent_Identity=26.2237762237762, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323729, Length=363, Percent_Identity=24.7933884297521, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6319621, Length=379, Percent_Identity=27.1767810026385, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17137530, Length=342, Percent_Identity=26.9005847953216, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI17737897, Length=341, Percent_Identity=26.9794721407625, Blast_Score=110, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 41179; Mature: 41048
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVTERTAEQLSPVIPKTMQAVVCHGPEDYRLETVDVPTPGPDEILTKVELCGICMGDI CCCHHHHHHHHHCCCCCHHHHHEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH KTYRGAPSFWGDAEQPRYVKPPMIPGHEFVCRVVALGPGAEKRGVQIGDRVISEQIVPCW HHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCHH GCRFCNHGQYWMCQKHDLYGFQNNVQGAMAQYMIFTREGIIHKVPDSIAPDEAILIEPLA CCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECHH CSLHAAERADVDFDDIVVVAGAGTLGLGIIGAVRMRNPKKLIVLDMKPERAALALRMGAD HHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHEECCCCEEEEEECCCCCEEEEEECCCC EVWNPAEVDVLAKIREITDGYGCDIYIEATGHHKAVNQGLAMLRKLGRFVEFSVFNDEAT CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEECCCCE VDWSIIGDRKELDVLGSHLGPYMYPRAIDFIGNRKIDMRDVVTHKFPLAQFKEAFAVMER EEEEEECCCHHHHHHHHHCCCHHCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHC GDKSLKVVLEP CCCEEEEEECC >Mature Secondary Structure STVTERTAEQLSPVIPKTMQAVVCHGPEDYRLETVDVPTPGPDEILTKVELCGICMGDI CCHHHHHHHHHCCCCCHHHHHEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH KTYRGAPSFWGDAEQPRYVKPPMIPGHEFVCRVVALGPGAEKRGVQIGDRVISEQIVPCW HHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHCCCHH GCRFCNHGQYWMCQKHDLYGFQNNVQGAMAQYMIFTREGIIHKVPDSIAPDEAILIEPLA CCEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECHH CSLHAAERADVDFDDIVVVAGAGTLGLGIIGAVRMRNPKKLIVLDMKPERAALALRMGAD HHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHEECCCCEEEEEECCCCCEEEEEECCCC EVWNPAEVDVLAKIREITDGYGCDIYIEATGHHKAVNQGLAMLRKLGRFVEFSVFNDEAT CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEECCCCE VDWSIIGDRKELDVLGSHLGPYMYPRAIDFIGNRKIDMRDVVTHKFPLAQFKEAFAVMER EEEEEECCCHHHHHHHHHCCCHHCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHC GDKSLKVVLEP CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10086842; 11058132 [H]