| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045556
Identifier: 66045556
GI number: 66045556
Start: 2692836
End: 2693231
Strand: Direct
Name: 66045556
Synonym: Psyr_2316
Alternate gene names: NA
Gene position: 2692836-2693231 (Clockwise)
Preceding gene: 66045555
Following gene: 66045557
Centisome position: 44.19
GC content: 63.89
Gene sequence:
>396_bases ATGTGTGAGAGCCGAGCCGACCCCGCACGCTACCAGCGTGGGTTCACCTTGCTGGAGATGCTTGCCGCATCGACCCTTAT GGCCATTTGCAGCACGGCCGTGCTGGTCGCCTTCGGCCAGAGCGTGCATTCCCTGTCGCAGGCCGAGCAGAGCGACCGCC TGACCGAAGCCGCCATGAGCGTGATGGATCAGGAAGCAGCAGGGCCGTTGGCTGACGGTATCCGCCAGGGCAGTCTGGGT GGCGGTATCAACTGGCAACTGAGCGTCGCCCGGCAACCGACACGTCAAGGCCAACTGCGCCTGTTTCGCCTAGACCTGAC GGTAAGCGACGCCCGGCATCAGGCGCGTTTCAGTACCTTGAGACTGCGTCCGGCGACTGATCAGGTGCACCTGTGA
Upstream 100 bases:
>100_bases TGGCAGTTCTTGTGCGACGGCTTGGCTCGGCATACTTTCGGAACTAAAAGAAAATAGCATCGTCCTGAAGGGCCCTACCG CGACCCCGAGGCTGAACCGC
Downstream 100 bases:
>100_bases ATCCCCAACGATGGCGTGTGTGCATGATGCCGCAGCGTGGCATTGCATTGCTGGTGGTGCTTTGGGTCATGGCTTTGCTC AGCCTGCTGCTGGGGTCACT
Product: general secretion pathway protein I, putative
Products: NA
Alternate protein names: General Secretion Pathway Protein GspI
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MCESRADPARYQRGFTLLEMLAASTLMAICSTAVLVAFGQSVHSLSQAEQSDRLTEAAMSVMDQEAAGPLADGIRQGSLG GGINWQLSVARQPTRQGQLRLFRLDLTVSDARHQARFSTLRLRPATDQVHL
Sequences:
>Translated_131_residues MCESRADPARYQRGFTLLEMLAASTLMAICSTAVLVAFGQSVHSLSQAEQSDRLTEAAMSVMDQEAAGPLADGIRQGSLG GGINWQLSVARQPTRQGQLRLFRLDLTVSDARHQARFSTLRLRPATDQVHL >Mature_131_residues MCESRADPARYQRGFTLLEMLAASTLMAICSTAVLVAFGQSVHSLSQAEQSDRLTEAAMSVMDQEAAGPLADGIRQGSLG GGINWQLSVARQPTRQGQLRLFRLDLTVSDARHQARFSTLRLRPATDQVHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14284; Mature: 14284
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCESRADPARYQRGFTLLEMLAASTLMAICSTAVLVAFGQSVHSLSQAEQSDRLTEAAMS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMDQEAAGPLADGIRQGSLGGGINWQLSVARQPTRQGQLRLFRLDLTVSDARHQARFSTL HHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEHHHHHHHHHHHHE RLRPATDQVHL ECCCCCCCCCC >Mature Secondary Structure MCESRADPARYQRGFTLLEMLAASTLMAICSTAVLVAFGQSVHSLSQAEQSDRLTEAAMS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMDQEAAGPLADGIRQGSLGGGINWQLSVARQPTRQGQLRLFRLDLTVSDARHQARFSTL HHHHHCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEHHHHHHHHHHHHE RLRPATDQVHL ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA