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The map label for this gene is 66045557

Identifier: 66045557

GI number: 66045557

Start: 2695281

End: 2696807

Strand: Direct

Name: 66045557

Synonym: Psyr_2320

Alternate gene names: NA

Gene position: 2695281-2696807 (Clockwise)

Preceding gene: 66045556

Following gene: 66045558

Centisome position: 44.23

GC content: 46.04

Gene sequence:

>1527_bases
ATGTTTAGGTTTATTGTTTTTGAATGTGGTTGTATTTCGGCTTTTCGGTCTTCAGTTATAGGGGTTTTTGTTTTTTCTTC
TGCTTTTTCAGTGGTGGCTGCCGCTGATACCTATAGCTATTGGTGGGAGCCTAACAGTCAATTAGGATTTAACGATCCCC
GTAAGGCGTGTGACTACCTATACTCAGAGTATTATTGGTCTCATTTGATTTCTAATTACAGGCCTGAGCTGAATCGTTAT
CGTGCCGGAGTTTACGACTGTGGATGGAACGATGGCGTTGAGGATGGTCATTTTGGCGGTGCCCAGTTTACGACTGTAGA
TTGCGATATTGATACATCACCTGATCGCCGTACAAAGAGTTGCAGTAGTAAGGCTCAGGTGGGTAATCCAATAGAAATTG
CCTCATGCTCAAATCCTTCTTCTGGTGTAGGTAATCCACTAAATGCTGCCAACGGCAACAAGTATCAGGAAGAAATTGAT
TTTAAAAGCGGCGGGGCAAACCCTATCATTATTGGTCGCTCATACAATAGCTTGGATGGAGTATGGAGGCATAATTTTTC
TACATCACTGTACTTTGGGAGTAAGACGGTAGTTTTGGTCAGCGCGGATGGTCGTGAGTCGATATTTTTGACAGATGGTC
GAGAATATAGGTCTAGCACTGATTCTGGTATATTGATCGCTCAGGCTGATGGTTGGCTATATAGATCTTCTGCGAATATA
GAAATGTATTTTACATCTAAGGGTTACCTGAGTTCGGTGACTGCTCTTAATGGTGATAAGTACACGTTAACATACCGGCA
TCAAAATGCAGATCGTGTAATAGCTATTGATAATGGGGTGGGAGTGATGGTTGAATTGATTGAGGATCCTCTTCATCAGC
TTAAAGCTCTCTCTGCTGGCCCTAAGAAAGTTGCATATCTTTATGGCTCTCGGCGACTGTTGAAGCGTGCTACGACCATG
GGGAGCTTTGTCTCAGTCCGTGAGTATCATTATGAAGATAGTCGAAATAACAGTTTGCTAACTGGTATTACCGACGAGAG
AGGAGTTCGTTTTGCTACTTGGAGCTACGATGTTCAAGGCCGCGCTGTGTCCAGTCAGCATGGTGATGGCGCTGGCCTAA
CTCAGATCGCCTACGGTGAGGATGGAGCCAGTACGATCACGAATGAGCTCGGCAAGCAGACCATTTATCGCTACCAAAAA
ATCTCCGGAGTAAAACGAATTGTTGCTATTGAGGGGGAGCCTACCCCTGACTGCCCAGCCAGCAACTCCACTTATACTTA
TAACGACCGTGGCCTCGTGCTCACCAAAACTGATGCTAAAGGCTTGGTCACTACCTACGACTACAACGACCGAGGCTTGG
AGGTCAGCCGTACCGAGGCCAGTGGTACTACTTTAGCGCGCACCACCACAACGGAATGGGATCCTGATCGTTTTCTCCCG
ATCAAGGTAATTGAACCCAATCGAATCACTGTGTATAGCTACGACAATCAAGGACGTGAGCTCACTCGGCAGAGCGCATC
CCGATGA

Upstream 100 bases:

>100_bases
ATTTTAGTTGGTGTTTTTTATGTGTGCCAATGAAGAAGGCATTGTTGCAGTTAGAGGTTTTTAGTGAGAGCTGATTTTAT
TAGGGTTTTTAGGGGGTGGA

Downstream 100 bases:

>100_bases
GTAGTATGGTATGGACTAAGATGAGATATAAAATAGTTGGTTTTCTGCTCATCGTCGGCCTTTCTATTGCGGGACCTGTT
GAGGCTTTAGAATTTAACGT

Product: YD repeat-containing protein

Products: NA

Alternate protein names: YD Repeat-Containing Protein; Rhs Family Protein; RhsD Protein; YD Repeat Protein; RHS-Related Protein; Rhs Family Transmembrane Protein; Rhs-Like Protein; RHS-Related Transmembrane Protein; Core Protein; Rhs Family Exported Protein; Rhs Family Protein-Like Protein; Hypothethical Protein RHS_repeat

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MFRFIVFECGCISAFRSSVIGVFVFSSAFSVVAAADTYSYWWEPNSQLGFNDPRKACDYLYSEYYWSHLISNYRPELNRY
RAGVYDCGWNDGVEDGHFGGAQFTTVDCDIDTSPDRRTKSCSSKAQVGNPIEIASCSNPSSGVGNPLNAANGNKYQEEID
FKSGGANPIIIGRSYNSLDGVWRHNFSTSLYFGSKTVVLVSADGRESIFLTDGREYRSSTDSGILIAQADGWLYRSSANI
EMYFTSKGYLSSVTALNGDKYTLTYRHQNADRVIAIDNGVGVMVELIEDPLHQLKALSAGPKKVAYLYGSRRLLKRATTM
GSFVSVREYHYEDSRNNSLLTGITDERGVRFATWSYDVQGRAVSSQHGDGAGLTQIAYGEDGASTITNELGKQTIYRYQK
ISGVKRIVAIEGEPTPDCPASNSTYTYNDRGLVLTKTDAKGLVTTYDYNDRGLEVSRTEASGTTLARTTTTEWDPDRFLP
IKVIEPNRITVYSYDNQGRELTRQSASR

Sequences:

>Translated_508_residues
MFRFIVFECGCISAFRSSVIGVFVFSSAFSVVAAADTYSYWWEPNSQLGFNDPRKACDYLYSEYYWSHLISNYRPELNRY
RAGVYDCGWNDGVEDGHFGGAQFTTVDCDIDTSPDRRTKSCSSKAQVGNPIEIASCSNPSSGVGNPLNAANGNKYQEEID
FKSGGANPIIIGRSYNSLDGVWRHNFSTSLYFGSKTVVLVSADGRESIFLTDGREYRSSTDSGILIAQADGWLYRSSANI
EMYFTSKGYLSSVTALNGDKYTLTYRHQNADRVIAIDNGVGVMVELIEDPLHQLKALSAGPKKVAYLYGSRRLLKRATTM
GSFVSVREYHYEDSRNNSLLTGITDERGVRFATWSYDVQGRAVSSQHGDGAGLTQIAYGEDGASTITNELGKQTIYRYQK
ISGVKRIVAIEGEPTPDCPASNSTYTYNDRGLVLTKTDAKGLVTTYDYNDRGLEVSRTEASGTTLARTTTTEWDPDRFLP
IKVIEPNRITVYSYDNQGRELTRQSASR
>Mature_508_residues
MFRFIVFECGCISAFRSSVIGVFVFSSAFSVVAAADTYSYWWEPNSQLGFNDPRKACDYLYSEYYWSHLISNYRPELNRY
RAGVYDCGWNDGVEDGHFGGAQFTTVDCDIDTSPDRRTKSCSSKAQVGNPIEIASCSNPSSGVGNPLNAANGNKYQEEID
FKSGGANPIIIGRSYNSLDGVWRHNFSTSLYFGSKTVVLVSADGRESIFLTDGREYRSSTDSGILIAQADGWLYRSSANI
EMYFTSKGYLSSVTALNGDKYTLTYRHQNADRVIAIDNGVGVMVELIEDPLHQLKALSAGPKKVAYLYGSRRLLKRATTM
GSFVSVREYHYEDSRNNSLLTGITDERGVRFATWSYDVQGRAVSSQHGDGAGLTQIAYGEDGASTITNELGKQTIYRYQK
ISGVKRIVAIEGEPTPDCPASNSTYTYNDRGLVLTKTDAKGLVTTYDYNDRGLEVSRTEASGTTLARTTTTEWDPDRFLP
IKVIEPNRITVYSYDNQGRELTRQSASR

Specific function: Unknown

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56376; Mature: 56376

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRFIVFECGCISAFRSSVIGVFVFSSAFSVVAAADTYSYWWEPNSQLGFNDPRKACDYL
CEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCHHHHHHHH
YSEYYWSHLISNYRPELNRYRAGVYDCGWNDGVEDGHFGGAQFTTVDCDIDTSPDRRTKS
HHHHHHHHHHHHCCCCHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH
CSSKAQVGNPIEIASCSNPSSGVGNPLNAANGNKYQEEIDFKSGGANPIIIGRSYNSLDG
CCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCC
VWRHNFSTSLYFGSKTVVLVSADGRESIFLTDGREYRSSTDSGILIAQADGWLYRSSANI
HHHCCCCEEEEECCEEEEEEECCCCCEEEEECCHHHCCCCCCCEEEEECCCEEEEECCCE
EMYFTSKGYLSSVTALNGDKYTLTYRHQNADRVIAIDNGVGVMVELIEDPLHQLKALSAG
EEEEECCCCEEEEEEECCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
PKKVAYLYGSRRLLKRATTMGSFVSVREYHYEDSRNNSLLTGITDERGVRFATWSYDVQG
CCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEECC
RAVSSQHGDGAGLTQIAYGEDGASTITNELGKQTIYRYQKISGVKRIVAIEGEPTPDCPA
CEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
SNSTYTYNDRGLVLTKTDAKGLVTTYDYNDRGLEVSRTEASGTTLARTTTTEWDPDRFLP
CCCEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCEEE
IKVIEPNRITVYSYDNQGRELTRQSASR
EEEECCCEEEEEEECCCCHHHHHHHCCC
>Mature Secondary Structure
MFRFIVFECGCISAFRSSVIGVFVFSSAFSVVAAADTYSYWWEPNSQLGFNDPRKACDYL
CEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCCCCCHHHHHHHH
YSEYYWSHLISNYRPELNRYRAGVYDCGWNDGVEDGHFGGAQFTTVDCDIDTSPDRRTKS
HHHHHHHHHHHHCCCCHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHH
CSSKAQVGNPIEIASCSNPSSGVGNPLNAANGNKYQEEIDFKSGGANPIIIGRSYNSLDG
CCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCC
VWRHNFSTSLYFGSKTVVLVSADGRESIFLTDGREYRSSTDSGILIAQADGWLYRSSANI
HHHCCCCEEEEECCEEEEEEECCCCCEEEEECCHHHCCCCCCCEEEEECCCEEEEECCCE
EMYFTSKGYLSSVTALNGDKYTLTYRHQNADRVIAIDNGVGVMVELIEDPLHQLKALSAG
EEEEECCCCEEEEEEECCCEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
PKKVAYLYGSRRLLKRATTMGSFVSVREYHYEDSRNNSLLTGITDERGVRFATWSYDVQG
CCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEECC
RAVSSQHGDGAGLTQIAYGEDGASTITNELGKQTIYRYQKISGVKRIVAIEGEPTPDCPA
CEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
SNSTYTYNDRGLVLTKTDAKGLVTTYDYNDRGLEVSRTEASGTTLARTTTTEWDPDRFLP
CCCEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCEEE
IKVIEPNRITVYSYDNQGRELTRQSASR
EEEECCCEEEEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA