| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045534
Identifier: 66045534
GI number: 66045534
Start: 2665760
End: 2666185
Strand: Reverse
Name: 66045534
Synonym: Psyr_2294
Alternate gene names: NA
Gene position: 2666185-2665760 (Counterclockwise)
Preceding gene: 66045539
Following gene: 66045523
Centisome position: 43.75
GC content: 58.45
Gene sequence:
>426_bases ATGAAAGATACTTACAACCTGCAACGCTTCGTCGATGCCCAGCAGCCGCTGTTCCAGCAGGTGTTAACGGAACTTGAAGC CGGGCAGAAACGCTCCCACTGGATGTGGTTTGTGTTCCCGCAGATCCAGGGGCTGGGGCGCAGCGACACGGCGCGACACT ACGCAATCACCGACCTCGATGAAGCGCGGGCTTACCTGCAACACCCCGTGCTGGGCCCGCGTCTGGAACAGTGCGCCGCC ATCATTGCGCCTCAGGTAGAACGTTCGGCGCGACAGATCTTCAGTTCGCCGGATGACATGAAACTGCATTCGAGCATGAC CCTGTTCAGCATCGCAGCACCTGAGCGGCCTGTGTTTCAAAAGGTGCTGGATACGTTTTTCGAGGGCGAGCGGGATGCAA TGACGGTGAACCTCCTGTCACGATGA
Upstream 100 bases:
>100_bases GAAAACCGGCATACGCTTAAAAACTCTTCAGACAGGTCGAACCCCCTTGAGGGGCGGCCATCATACGACCACAGGTTCGT TGAAAAACAGGAAACTCATC
Downstream 100 bases:
>100_bases TTCGACTTCACTTGGGCGCACGCTGCACGCAGCGTTCGCGTCGGTCGTCGACGCGCTCGGCAAACCAGGCGGTAGTAAGG TTGCGGGTGATTTTCGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase With Conserved Domain; NUDIX Family Protein Hydrolase
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MKDTYNLQRFVDAQQPLFQQVLTELEAGQKRSHWMWFVFPQIQGLGRSDTARHYAITDLDEARAYLQHPVLGPRLEQCAA IIAPQVERSARQIFSSPDDMKLHSSMTLFSIAAPERPVFQKVLDTFFEGERDAMTVNLLSR
Sequences:
>Translated_141_residues MKDTYNLQRFVDAQQPLFQQVLTELEAGQKRSHWMWFVFPQIQGLGRSDTARHYAITDLDEARAYLQHPVLGPRLEQCAA IIAPQVERSARQIFSSPDDMKLHSSMTLFSIAAPERPVFQKVLDTFFEGERDAMTVNLLSR >Mature_141_residues MKDTYNLQRFVDAQQPLFQQVLTELEAGQKRSHWMWFVFPQIQGLGRSDTARHYAITDLDEARAYLQHPVLGPRLEQCAA IIAPQVERSARQIFSSPDDMKLHSSMTLFSIAAPERPVFQKVLDTFFEGERDAMTVNLLSR
Specific function: Unknown
COG id: COG5579
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16240; Mature: 16240
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTYNLQRFVDAQQPLFQQVLTELEAGQKRSHWMWFVFPQIQGLGRSDTARHYAITDLD CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHH EARAYLQHPVLGPRLEQCAAIIAPQVERSARQIFSSPDDMKLHSSMTLFSIAAPERPVFQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEECCCCCHHHH KVLDTFFEGERDAMTVNLLSR HHHHHHHCCCCCEEEEEECCC >Mature Secondary Structure MKDTYNLQRFVDAQQPLFQQVLTELEAGQKRSHWMWFVFPQIQGLGRSDTARHYAITDLD CCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHH EARAYLQHPVLGPRLEQCAAIIAPQVERSARQIFSSPDDMKLHSSMTLFSIAAPERPVFQ HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEECCCCCHHHH KVLDTFFEGERDAMTVNLLSR HHHHHHHCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA