| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045539
Identifier: 66045539
GI number: 66045539
Start: 2671963
End: 2673390
Strand: Reverse
Name: 66045539
Synonym: Psyr_2299
Alternate gene names: NA
Gene position: 2673390-2671963 (Counterclockwise)
Preceding gene: 66045540
Following gene: 66045534
Centisome position: 43.87
GC content: 59.8
Gene sequence:
>1428_bases ATGCCACTCGATTCGCGCACATCGATGTGTATCCCCCTGTTTTTGCTAGGTGCCGCCATCACGGCAAGTTTTCTGGCCTC CAGTGGTCCGGTGCAATGGATGGACAATGGCATGTTCCTGGCCAACGCCCATGAGGGTCAGTATTTCAGCCAGTCGCTCG GGCCGCTGGAGCACCCGTTTTATCAGCTGTTCAATACGGTTTTTTTCAACCTGTTCGGTGCACGCTCGCTCAGCCTGCTG AATTCGGTGCTTTTCCTGCCGCTGGCTTGGGTCGTCTACCGATTGGCGCAGAGCGTTGGCGCGGGTGCACGCCAGGCGCT GCTCGCTGCCGCGGCGATAACACTGGCCCATGGTGTGTTCTGGGTGTCGACCAAGGCTGAGGTCTACCTGTTGCACACGC TGATCGTGCTACTGGCCTATGCGCTGTACTTCAATGACAGTCCGCTTCTGACGCCGCTGAAAAAACTCTTCGCGATTGGC GTACTCACCGGGCTGGCGGCCTCGGTTCATCAACTGACGTTCGTGGTTCTGCTGCCGCTTTACCTGCACCTGCTGTTTCA GCACAAGGCGCGAGTATTGATCACCCTGCCCGGCTTCATGCTTGGTTTCGCGGCGGCCGCTGTTGCGGTAATCAATGACC TGAACGCCGGGATGGGCCTGCTGGATATTGCGCATCGTTACATGACCGGGACCAGCGCGACCGTTGCAGGGCCGGAGTGG GAAGGCAGTCTGTTGCGTTTCGACAAACTCCTCGAGGAGAAGAGCGCGGTAGCGCTGTTGCTGCTGTCGCTGATCGGGCC GCAACTGGCGGGGCTGCTGCTGTTTCCCAAGGGAAGCCGGCTGCGCTTGTTATGGAGCGCCGCGCTGCTGAATCTGGTGT TCGCCATTTCCTACAATGTGACCGACCGCTTTACCTTTTTTCTACCCGGTGCAGCGATACTGACGATCCTCGGCATGATT CAGTTGCGGCGTATCCTGCCCCGCACAGCGGCACGCGGCACGTTGCTCAATCTCTCGGCATTGTCGGCACCGGCAGTCAT CCTGCTGACGTATTCACTCTACGCCAACGGGGTCATCACCCTTCCGGCGCACAAGGAGCAGCTGCCCTATCGTGACGATA TTCGCTACTTCATGGTGCCCTACCTGCGCGACCGGTCCGCTGAGCATTTCGTGCGCGCCTACGAGCCGGTAGTGCCCAAA GGTGCGTTGATCATTGCCGACTGGACACCGATGGGCGCGATGCGCTCGGGGCAAGCGATCGGGCTGCTTGCCGGACGCAC GCTGGCGACCTGTGATGACGACGTGGCGATTCGGGCAGCCATGCGCAGCAACGGCGTTTATCTGCCGCGGTTGAGTTATT GCGCGACTGTGGCGCAAGACCACCGACTTGAAGAACAGCCAGTGGGGTATTCATTGCACGCCAAGTGA
Upstream 100 bases:
>100_bases TCTCGCGCTTTACCGGCGCGAAACCCGTACCGAATCCTCAGTCTTGAGGCCATAACTCAGACGCTCGACATTTTTGTTCA CCTCACGGAGGAGCGGTTCA
Downstream 100 bases:
>100_bases AACGAATCATGGCTGAAGCGTTGAACGTTCATTTCATGATCCGTTTCTTCACCGTGTCAAGGCTGCCAGAGCGCCTGTCC ACCGCCCAGTTTGCGGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MPLDSRTSMCIPLFLLGAAITASFLASSGPVQWMDNGMFLANAHEGQYFSQSLGPLEHPFYQLFNTVFFNLFGARSLSLL NSVLFLPLAWVVYRLAQSVGAGARQALLAAAAITLAHGVFWVSTKAEVYLLHTLIVLLAYALYFNDSPLLTPLKKLFAIG VLTGLAASVHQLTFVVLLPLYLHLLFQHKARVLITLPGFMLGFAAAAVAVINDLNAGMGLLDIAHRYMTGTSATVAGPEW EGSLLRFDKLLEEKSAVALLLLSLIGPQLAGLLLFPKGSRLRLLWSAALLNLVFAISYNVTDRFTFFLPGAAILTILGMI QLRRILPRTAARGTLLNLSALSAPAVILLTYSLYANGVITLPAHKEQLPYRDDIRYFMVPYLRDRSAEHFVRAYEPVVPK GALIIADWTPMGAMRSGQAIGLLAGRTLATCDDDVAIRAAMRSNGVYLPRLSYCATVAQDHRLEEQPVGYSLHAK
Sequences:
>Translated_475_residues MPLDSRTSMCIPLFLLGAAITASFLASSGPVQWMDNGMFLANAHEGQYFSQSLGPLEHPFYQLFNTVFFNLFGARSLSLL NSVLFLPLAWVVYRLAQSVGAGARQALLAAAAITLAHGVFWVSTKAEVYLLHTLIVLLAYALYFNDSPLLTPLKKLFAIG VLTGLAASVHQLTFVVLLPLYLHLLFQHKARVLITLPGFMLGFAAAAVAVINDLNAGMGLLDIAHRYMTGTSATVAGPEW EGSLLRFDKLLEEKSAVALLLLSLIGPQLAGLLLFPKGSRLRLLWSAALLNLVFAISYNVTDRFTFFLPGAAILTILGMI QLRRILPRTAARGTLLNLSALSAPAVILLTYSLYANGVITLPAHKEQLPYRDDIRYFMVPYLRDRSAEHFVRAYEPVVPK GALIIADWTPMGAMRSGQAIGLLAGRTLATCDDDVAIRAAMRSNGVYLPRLSYCATVAQDHRLEEQPVGYSLHAK >Mature_474_residues PLDSRTSMCIPLFLLGAAITASFLASSGPVQWMDNGMFLANAHEGQYFSQSLGPLEHPFYQLFNTVFFNLFGARSLSLLN SVLFLPLAWVVYRLAQSVGAGARQALLAAAAITLAHGVFWVSTKAEVYLLHTLIVLLAYALYFNDSPLLTPLKKLFAIGV LTGLAASVHQLTFVVLLPLYLHLLFQHKARVLITLPGFMLGFAAAAVAVINDLNAGMGLLDIAHRYMTGTSATVAGPEWE GSLLRFDKLLEEKSAVALLLLSLIGPQLAGLLLFPKGSRLRLLWSAALLNLVFAISYNVTDRFTFFLPGAAILTILGMIQ LRRILPRTAARGTLLNLSALSAPAVILLTYSLYANGVITLPAHKEQLPYRDDIRYFMVPYLRDRSAEHFVRAYEPVVPKG ALIIADWTPMGAMRSGQAIGLLAGRTLATCDDDVAIRAAMRSNGVYLPRLSYCATVAQDHRLEEQPVGYSLHAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51831; Mature: 51700
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDSRTSMCIPLFLLGAAITASFLASSGPVQWMDNGMFLANAHEGQYFSQSLGPLEHPF CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHCCCCCHHH YQLFNTVFFNLFGARSLSLLNSVLFLPLAWVVYRLAQSVGAGARQALLAAAAITLAHGVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEE WVSTKAEVYLLHTLIVLLAYALYFNDSPLLTPLKKLFAIGVLTGLAASVHQLTFVVLLPL EEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLHLLFQHKARVLITLPGFMLGFAAAAVAVINDLNAGMGLLDIAHRYMTGTSATVAGPEW HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCC EGSLLRFDKLLEEKSAVALLLLSLIGPQLAGLLLFPKGSRLRLLWSAALLNLVFAISYNV CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCEEEECCCCCCHHHHHHHHHHHHHHHCCCC TDRFTFFLPGAAILTILGMIQLRRILPRTAARGTLLNLSALSAPAVILLTYSLYANGVIT CCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHEEHHHHHCCEEE LPAHKEQLPYRDDIRYFMVPYLRDRSAEHFVRAYEPVVPKGALIIADWTPMGAMRSGQAI CCCCCCCCCCHHCCHHHEEHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEE GLLAGRTLATCDDDVAIRAAMRSNGVYLPRLSYCATVAQDHRLEEQPVGYSLHAK EEEECCEEECCCCHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCCCCCCEEECCC >Mature Secondary Structure PLDSRTSMCIPLFLLGAAITASFLASSGPVQWMDNGMFLANAHEGQYFSQSLGPLEHPF CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHHHCCCCCHHH YQLFNTVFFNLFGARSLSLLNSVLFLPLAWVVYRLAQSVGAGARQALLAAAAITLAHGVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEE WVSTKAEVYLLHTLIVLLAYALYFNDSPLLTPLKKLFAIGVLTGLAASVHQLTFVVLLPL EEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLHLLFQHKARVLITLPGFMLGFAAAAVAVINDLNAGMGLLDIAHRYMTGTSATVAGPEW HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCC EGSLLRFDKLLEEKSAVALLLLSLIGPQLAGLLLFPKGSRLRLLWSAALLNLVFAISYNV CCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCEEEECCCCCCHHHHHHHHHHHHHHHCCCC TDRFTFFLPGAAILTILGMIQLRRILPRTAARGTLLNLSALSAPAVILLTYSLYANGVIT CCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHEEHHHHHCCEEE LPAHKEQLPYRDDIRYFMVPYLRDRSAEHFVRAYEPVVPKGALIIADWTPMGAMRSGQAI CCCCCCCCCCHHCCHHHEEHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEE GLLAGRTLATCDDDVAIRAAMRSNGVYLPRLSYCATVAQDHRLEEQPVGYSLHAK EEEECCEEECCCCHHHHHHHHHCCCEECCHHHHHHHHHHHCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA