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The map label for this gene is 66045130

Identifier: 66045130

GI number: 66045130

Start: 2158941

End: 2159597

Strand: Reverse

Name: 66045130

Synonym: Psyr_1889

Alternate gene names: NA

Gene position: 2159597-2158941 (Counterclockwise)

Preceding gene: 66045131

Following gene: 66045126

Centisome position: 35.44

GC content: 47.95

Gene sequence:

>657_bases
ATGATCACTCCGTCTCGATACCCAGGCATCTATATCGCCCCCCTCAGTAGCGAACCGACAGCAGCTCACACATTCAAAGA
ACAGGCAGAGAAAGCGCTTGACCATATCAGCGCCGGCCCCTCTGGCCGTGAGCTGTTACAAGAAATATCCAAGCTTGCCA
GTAAAAAAGATAGAAAAGTCACCCTTAAAGAGATTGAAATAAATAACCAATGTTATACCGATGCTGTTCTGAGCAGGAGG
CAACTGGAAAAGTACGAACCCGAAGACTTTAACGAGAATCGGCGCATTGCATCACGGCTATCACGAAAGGGGACCTTTAC
CAAAGGTGAAGGAAGCAATGCGATTATTGGCTGGTCACCAGACAAAGCAAGCATACGCTTAAATCAGAATGGCTCACCGT
TACGCCTTGGAATGGATAACGACGACAAAATCACGACCTTGGCTCATGAGCTAGTTCATGTTCGACACGTGTTGAGTGGG
AGTTCCTTAGCGGATGACGGAGATCGCTATAATCCACGTACGGGATCTGGCAAAGAGGAACTTAGGGCCGTTGGATTAGA
TAAGTACAGCTATTCACTTACAAAAGAACCGTCAGAGAACTCCATCCGAGCTGAACACGGTCTGCCTCTGCGCATGAAGT
ACAGGCCACATCAATAG

Upstream 100 bases:

>100_bases
CATTGGACTCCCTGCCAAACCATGTCAGCAACAATTGGGGTAGCGCCAATAGTTGCAATTTCAAGCGATCATATAGCTCA
ATTAACTTCTTAGGATAGTC

Downstream 100 bases:

>100_bases
GACAACCTACTGTAAGTAAATTCAAAGTGGTCTTCGGATCCCGGTGACCTGCATAGGCTGTCAATTCATGCAGTTTCCAC
CCCGCACGGGCCAAATGGGG

Product: type III effector HopH1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MITPSRYPGIYIAPLSSEPTAAHTFKEQAEKALDHISAGPSGRELLQEISKLASKKDRKVTLKEIEINNQCYTDAVLSRR
QLEKYEPEDFNENRRIASRLSRKGTFTKGEGSNAIIGWSPDKASIRLNQNGSPLRLGMDNDDKITTLAHELVHVRHVLSG
SSLADDGDRYNPRTGSGKEELRAVGLDKYSYSLTKEPSENSIRAEHGLPLRMKYRPHQ

Sequences:

>Translated_218_residues
MITPSRYPGIYIAPLSSEPTAAHTFKEQAEKALDHISAGPSGRELLQEISKLASKKDRKVTLKEIEINNQCYTDAVLSRR
QLEKYEPEDFNENRRIASRLSRKGTFTKGEGSNAIIGWSPDKASIRLNQNGSPLRLGMDNDDKITTLAHELVHVRHVLSG
SSLADDGDRYNPRTGSGKEELRAVGLDKYSYSLTKEPSENSIRAEHGLPLRMKYRPHQ
>Mature_218_residues
MITPSRYPGIYIAPLSSEPTAAHTFKEQAEKALDHISAGPSGRELLQEISKLASKKDRKVTLKEIEINNQCYTDAVLSRR
QLEKYEPEDFNENRRIASRLSRKGTFTKGEGSNAIIGWSPDKASIRLNQNGSPLRLGMDNDDKITTLAHELVHVRHVLSG
SSLADDGDRYNPRTGSGKEELRAVGLDKYSYSLTKEPSENSIRAEHGLPLRMKYRPHQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24443; Mature: 24443

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPSRYPGIYIAPLSSEPTAAHTFKEQAEKALDHISAGPSGRELLQEISKLASKKDRKV
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
TLKEIEINNQCYTDAVLSRRQLEKYEPEDFNENRRIASRLSRKGTFTKGEGSNAIIGWSP
EEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECC
DKASIRLNQNGSPLRLGMDNDDKITTLAHELVHVRHVLSGSSLADDGDRYNPRTGSGKEE
CCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
LRAVGLDKYSYSLTKEPSENSIRAEHGLPLRMKYRPHQ
HHHHCCCCCEEEECCCCCCCCEECCCCCCEEECCCCCC
>Mature Secondary Structure
MITPSRYPGIYIAPLSSEPTAAHTFKEQAEKALDHISAGPSGRELLQEISKLASKKDRKV
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
TLKEIEINNQCYTDAVLSRRQLEKYEPEDFNENRRIASRLSRKGTFTKGEGSNAIIGWSP
EEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECC
DKASIRLNQNGSPLRLGMDNDDKITTLAHELVHVRHVLSGSSLADDGDRYNPRTGSGKEE
CCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
LRAVGLDKYSYSLTKEPSENSIRAEHGLPLRMKYRPHQ
HHHHCCCCCEEEECCCCCCCCEECCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA