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The map label for this gene is 66045126

Identifier: 66045126

GI number: 66045126

Start: 2153993

End: 2154496

Strand: Reverse

Name: 66045126

Synonym: Psyr_1882

Alternate gene names: NA

Gene position: 2154496-2153993 (Counterclockwise)

Preceding gene: 66045130

Following gene: 66045125

Centisome position: 35.36

GC content: 58.53

Gene sequence:

>504_bases
ATGAATGAACGCGCACGTGAACTGGCGTCTCGTCTGATTCGCAATTTCAACGAAGCTCCCCTCGAACATGAAGTTCGTGA
ACCGCTCTATGAAAGCTCTGCAGCTCGCCTGGGCACAGGCACGGCAGCGCAAAAGCTGGGGGCGTCGATTGACGTGGTGG
CGCCGGGCAAGCGCTCCTGCCCTTATCACTTTCATCATGTGCAGGAAGAGATGTTCGTGATCATCGAGGGCGAAGGCAGT
TTGCGTGTTGCGGGTGAGATGCTGCCGATCAAGGCGGGGGACGTCTTGTTTATCCCCGCGGGTGCCGACTACCCGCACCA
GATAATCAATACCTCGCAGGCGCCGCTGAAATACCTGTCGATCAGCACCCGGGAAACACCGGAAGTGTGTGAGTACCCGG
ACTCGGGCAAGTACCAGGCCATGGTGTCCGTTCAAGGGACCCGAGTGTTCACCGCCAACCAGCGGACCACGGAAAACCTC
GATTACTGGGACGGAGAGCCCTGA

Upstream 100 bases:

>100_bases
TGCCTGGGGCTGTTTTTGCCTGATCGAGGTAACTGCCTGCAACACCTCACGCTCTCTGGTCTAAAGTACCCTCTTCTGAA
CTCCCCGAGCCTCGACCGAC

Downstream 100 bases:

>100_bases
TTTGAATTGTTTGTAAATTGTATCCGGCAGTTCACGCTTTTTTCACGTTCGCGGGTTTATTGTTAACTCAATTCCCAGCA
AGACCTTAAGCCCGCTACCC

Product: auxin-binding protein, putative

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Region; Cupin Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Protein; Mannose-6-Phosphate Isomerase; Sugar Oxidoreductase

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNERARELASRLIRNFNEAPLEHEVREPLYESSAARLGTGTAAQKLGASIDVVAPGKRSCPYHFHHVQEEMFVIIEGEGS
LRVAGEMLPIKAGDVLFIPAGADYPHQIINTSQAPLKYLSISTRETPEVCEYPDSGKYQAMVSVQGTRVFTANQRTTENL
DYWDGEP

Sequences:

>Translated_167_residues
MNERARELASRLIRNFNEAPLEHEVREPLYESSAARLGTGTAAQKLGASIDVVAPGKRSCPYHFHHVQEEMFVIIEGEGS
LRVAGEMLPIKAGDVLFIPAGADYPHQIINTSQAPLKYLSISTRETPEVCEYPDSGKYQAMVSVQGTRVFTANQRTTENL
DYWDGEP
>Mature_167_residues
MNERARELASRLIRNFNEAPLEHEVREPLYESSAARLGTGTAAQKLGASIDVVAPGKRSCPYHFHHVQEEMFVIIEGEGS
LRVAGEMLPIKAGDVLFIPAGADYPHQIINTSQAPLKYLSISTRETPEVCEYPDSGKYQAMVSVQGTRVFTANQRTTENL
DYWDGEP

Specific function: Unknown

COG id: COG3837

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18550; Mature: 18550

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERARELASRLIRNFNEAPLEHEVREPLYESSAARLGTGTAAQKLGASIDVVAPGKRSC
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHCCCCHHHHHHCCEEEEECCCCCCC
PYHFHHVQEEMFVIIEGEGSLRVAGEMLPIKAGDVLFIPAGADYPHQIINTSQAPLKYLS
CHHHHCCCCEEEEEEECCCCEEEECEEEEECCCCEEEEECCCCCCHHHHCCCCCCEEEEE
ISTRETPEVCEYPDSGKYQAMVSVQGTRVFTANQRTTENLDYWDGEP
ECCCCCCHHHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNERARELASRLIRNFNEAPLEHEVREPLYESSAARLGTGTAAQKLGASIDVVAPGKRSC
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHCCCCHHHHHHCCEEEEECCCCCCC
PYHFHHVQEEMFVIIEGEGSLRVAGEMLPIKAGDVLFIPAGADYPHQIINTSQAPLKYLS
CHHHHCCCCEEEEEEECCCCEEEECEEEEECCCCEEEEECCCCCCHHHHCCCCCCEEEEE
ISTRETPEVCEYPDSGKYQAMVSVQGTRVFTANQRTTENLDYWDGEP
ECCCCCCHHHCCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA