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The map label for this gene is algE5 [H]

Identifier: 66045129

GI number: 66045129

Start: 2156083

End: 2157570

Strand: Direct

Name: algE5 [H]

Synonym: Psyr_1886

Alternate gene names: 66045129

Gene position: 2156083-2157570 (Clockwise)

Preceding gene: 66045128

Following gene: 66045134

Centisome position: 35.38

GC content: 56.79

Gene sequence:

>1488_bases
ATGTCTACCGTCTTACAATCTGCTCTGTCATCAGAACTAGATGAACAAATTACGTTTCATAAACGGCCTTCTTTCAATAC
CTACACGGGTACGTCAGGCGACGACGCACTTGCCGGTACGTATTGGGACGATCACCTGCTCGGCGGCGCCGGGGATGACA
CCCTGGATGGACATAGTGGCAGCGACACATTGATAGGCGGCGCTGGGGTAGATACCCTCACCGGCGGAGAAACCTACGGA
TACGGGGTGAAATTCGTGTTCACGTCGCTTACCGATAGTTACGCCAACGCCCAAGGCTCCCACTCGGACCTGATTACCAG
CTTCAGCGAATACGACGTATTGGACCTGACCACCCTGCACTTGGAGCGGATCGGTAACGGCCATAATGGCGACCTGGCCG
TAAGCTATGACGCGGCCTCGGATATCACCTACCTGCGCTCGCTGGACAAAGACGCCAGCGGTAATTTCTTCGAGGTACGC
CTGGCGGGCGATTATCAAGGCAAGCTAAGCACCTCCAACTTTGTACTGCGTAATGACGGCACGGCCGGCAACGACACGCT
CTATAGCCTCAGCACCAAGCAATACGTGCTCAATGGCCTGGACGGCGACGATACGCTGTATGCCGGGAAAACCGGCAGTG
TACTGGACGGTGGCGCCGGTGCTGATCACCTGATCGGCAATACCAACGCCGAAACCTTCCTCTATCACCAGATCAGCGAC
AGTTTCGTCAATGACGCCTCGGGTGTGGCCAGCGTTGACCTTATCAGCGATTTCAACCTGTTCCGTGGGGATGTATTGGA
CGTTTCCGCGCTAGGCTTCACTGGCCTGGGCGATGGCTATGACGGCACGCTGAATTACGCCTATGACAAGACCCTTGGGC
ATATCGTGGTGCAGTCTTTCGAAGCTGATGCCCAGGGCAACCGCTTCGAAGTGTATATCGACCAGTCCAACCGCCACGGT
AGCATTGCTTACCAAGATGCCGATGGTTTTATCTTCGCCGGTGACAACAGCCATGACGATGCAGACCAGACCCTGACCGG
GAAGCCGGGTTGGGATTCGCTGCACACGCAAGACGCGGGCGGTGTTCTGATTGGTGGCGGCGCGGGCGATGCGCTGACAG
GCGGTTCAGGGGTAGATACCTTCCGCTATCTGGACAGCAGCGACAGCGTCCATGGCGCCGCCGACCTGATCAAAAACTTC
GATGTAGCCCACGACAAGATTGACGTGGCCGCCCTCGGCTACACGGGCCTCGGTGACGGCACCAACGGCACCTTGAAGCT
GGTCTACGACAAGGAGCTCCACCACACCTACCTCAAGGATTACGACTTGAACGCCGACGGTCAACGCTTTGAGATCGGTT
TGGTCGGTACCTTCACTAAGACCTTCACAGCAGACAACCTGATCGTTGCAGGCACCGTTTCAACAGCCGAGCACGCTACC
GTTGAATTGGTAGGCGTTGCGCCAGCAGATAACCATCTGGTGGGATAG

Upstream 100 bases:

>100_bases
GATGCTGTAATGAGTGCGCTCATCGATGTGAGCCCTTGCATTCAGGCAGGGCCGAGCAGTCCATCCATGGGAAATTTCCG
TCCTGTTCAGGCGAACTATC

Downstream 100 bases:

>100_bases
TGCAATAATCCACACTGGCTGATCGTCGAGATGTTAGTGAATCGCGGCGAGCTCAGCCAGTGTCTCTTGGACAGGCACTG
ATACGTGGCTTCTCGGCCAA

Product: hemolysin-type calcium-binding region

Products: NA

Alternate protein names: Mannuronan epimerase 5 [H]

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MSTVLQSALSSELDEQITFHKRPSFNTYTGTSGDDALAGTYWDDHLLGGAGDDTLDGHSGSDTLIGGAGVDTLTGGETYG
YGVKFVFTSLTDSYANAQGSHSDLITSFSEYDVLDLTTLHLERIGNGHNGDLAVSYDAASDITYLRSLDKDASGNFFEVR
LAGDYQGKLSTSNFVLRNDGTAGNDTLYSLSTKQYVLNGLDGDDTLYAGKTGSVLDGGAGADHLIGNTNAETFLYHQISD
SFVNDASGVASVDLISDFNLFRGDVLDVSALGFTGLGDGYDGTLNYAYDKTLGHIVVQSFEADAQGNRFEVYIDQSNRHG
SIAYQDADGFIFAGDNSHDDADQTLTGKPGWDSLHTQDAGGVLIGGGAGDALTGGSGVDTFRYLDSSDSVHGAADLIKNF
DVAHDKIDVAALGYTGLGDGTNGTLKLVYDKELHHTYLKDYDLNADGQRFEIGLVGTFTKTFTADNLIVAGTVSTAEHAT
VELVGVAPADNHLVG

Sequences:

>Translated_495_residues
MSTVLQSALSSELDEQITFHKRPSFNTYTGTSGDDALAGTYWDDHLLGGAGDDTLDGHSGSDTLIGGAGVDTLTGGETYG
YGVKFVFTSLTDSYANAQGSHSDLITSFSEYDVLDLTTLHLERIGNGHNGDLAVSYDAASDITYLRSLDKDASGNFFEVR
LAGDYQGKLSTSNFVLRNDGTAGNDTLYSLSTKQYVLNGLDGDDTLYAGKTGSVLDGGAGADHLIGNTNAETFLYHQISD
SFVNDASGVASVDLISDFNLFRGDVLDVSALGFTGLGDGYDGTLNYAYDKTLGHIVVQSFEADAQGNRFEVYIDQSNRHG
SIAYQDADGFIFAGDNSHDDADQTLTGKPGWDSLHTQDAGGVLIGGGAGDALTGGSGVDTFRYLDSSDSVHGAADLIKNF
DVAHDKIDVAALGYTGLGDGTNGTLKLVYDKELHHTYLKDYDLNADGQRFEIGLVGTFTKTFTADNLIVAGTVSTAEHAT
VELVGVAPADNHLVG
>Mature_494_residues
STVLQSALSSELDEQITFHKRPSFNTYTGTSGDDALAGTYWDDHLLGGAGDDTLDGHSGSDTLIGGAGVDTLTGGETYGY
GVKFVFTSLTDSYANAQGSHSDLITSFSEYDVLDLTTLHLERIGNGHNGDLAVSYDAASDITYLRSLDKDASGNFFEVRL
AGDYQGKLSTSNFVLRNDGTAGNDTLYSLSTKQYVLNGLDGDDTLYAGKTGSVLDGGAGADHLIGNTNAETFLYHQISDS
FVNDASGVASVDLISDFNLFRGDVLDVSALGFTGLGDGYDGTLNYAYDKTLGHIVVQSFEADAQGNRFEVYIDQSNRHGS
IAYQDADGFIFAGDNSHDDADQTLTGKPGWDSLHTQDAGGVLIGGGAGDALTGGSGVDTFRYLDSSDSVHGAADLIKNFD
VAHDKIDVAALGYTGLGDGTNGTLKLVYDKELHHTYLKDYDLNADGQRFEIGLVGTFTKTFTADNLIVAGTVSTAEHATV
ELVGVAPADNHLVG

Specific function: Converts beta-D-mannuronic acid (M) to alpha-L-guluronic acid (G), producing a polymer with gel-forming capacity, required for the formation of the cyst coat [H]

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Secreted, extracellular space. Note=Probably exported via the hemolysin-type secretion pathway [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 7 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00353 HemolysinCabind [H]

EC number: NA

Molecular weight: Translated: 52151; Mature: 52020

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVLQSALSSELDEQITFHKRPSFNTYTGTSGDDALAGTYWDDHLLGGAGDDTLDGHSG
CHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
SDTLIGGAGVDTLTGGETYGYGVKFVFTSLTDSYANAQGSHSDLITSFSEYDVLDLTTLH
CCCEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHCCCCCCEEEEHHHH
LERIGNGHNGDLAVSYDAASDITYLRSLDKDASGNFFEVRLAGDYQGKLSTSNFVLRNDG
HHHCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCC
TAGNDTLYSLSTKQYVLNGLDGDDTLYAGKTGSVLDGGAGADHLIGNTNAETFLYHQISD
CCCCCEEEEECCCHHEEECCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEEHHH
SFVNDASGVASVDLISDFNLFRGDVLDVSALGFTGLGDGYDGTLNYAYDKTLGHIVVQSF
HHHCCCCCCEEEEEECCCCHHCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHEEEE
EADAQGNRFEVYIDQSNRHGSIAYQDADGFIFAGDNSHDDADQTLTGKPGWDSLHTQDAG
CCCCCCCEEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCC
GVLIGGGAGDALTGGSGVDTFRYLDSSDSVHGAADLIKNFDVAHDKIDVAALGYTGLGDG
CEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCC
TNGTLKLVYDKELHHTYLKDYDLNADGQRFEIGLVGTFTKTFTADNLIVAGTVSTAEHAT
CCCEEEEEEECCHHHHHHHCCCCCCCCCEEEEEEEEEEEHEECCCCEEEEEECCCCCCCE
VELVGVAPADNHLVG
EEEEEECCCCCCCCC
>Mature Secondary Structure 
STVLQSALSSELDEQITFHKRPSFNTYTGTSGDDALAGTYWDDHLLGGAGDDTLDGHSG
HHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
SDTLIGGAGVDTLTGGETYGYGVKFVFTSLTDSYANAQGSHSDLITSFSEYDVLDLTTLH
CCCEEECCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHCCCCCCEEEEHHHH
LERIGNGHNGDLAVSYDAASDITYLRSLDKDASGNFFEVRLAGDYQGKLSTSNFVLRNDG
HHHCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCC
TAGNDTLYSLSTKQYVLNGLDGDDTLYAGKTGSVLDGGAGADHLIGNTNAETFLYHQISD
CCCCCEEEEECCCHHEEECCCCCCEEEECCCCCEECCCCCCCCCCCCCCCCEEEEEEHHH
SFVNDASGVASVDLISDFNLFRGDVLDVSALGFTGLGDGYDGTLNYAYDKTLGHIVVQSF
HHHCCCCCCEEEEEECCCCHHCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHEEEE
EADAQGNRFEVYIDQSNRHGSIAYQDADGFIFAGDNSHDDADQTLTGKPGWDSLHTQDAG
CCCCCCCEEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCCC
GVLIGGGAGDALTGGSGVDTFRYLDSSDSVHGAADLIKNFDVAHDKIDVAALGYTGLGDG
CEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCC
TNGTLKLVYDKELHHTYLKDYDLNADGQRFEIGLVGTFTKTFTADNLIVAGTVSTAEHAT
CCCEEEEEEECCHHHHHHHCCCCCCCCCEEEEEEEEEEEHEECCCCEEEEEECCCCCCCE
VELVGVAPADNHLVG
EEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476166; 11243259; 10937941 [H]