| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is umuC [C]
Identifier: 66045128
GI number: 66045128
Start: 2155794
End: 2155952
Strand: Direct
Name: umuC [C]
Synonym: Psyr_1885
Alternate gene names: 66045128
Gene position: 2155794-2155952 (Clockwise)
Preceding gene: 66045127
Following gene: 66045129
Centisome position: 35.38
GC content: 52.83
Gene sequence:
>159_bases ATGGCGTGCGTACCTTCGACCTCACCTCCTGACCAGGTCTTCGCTCTGATTGATTGCAACAGCTTTTACGCCAGTTGCGA GCGCGTATTTCGCCCTGATCTGGCAAAGGTCCCGATCGTAGTGCTGAGGAACAACAATCTGAGCGATACCGATTGTTAG
Upstream 100 bases:
>100_bases CATACAAGGGCAGAGCGTCGTTTGATCTCGGAGAATCCTGGCTATGCGCCGCGCTACATTCTGGAAGGGGAGGAATTGGT AATTTTTTTGGGGGGCAAGC
Downstream 100 bases:
>100_bases GAAATCTTGAGCCACAATCACGGTCTGTATGATGCTGTAATGAGTGCGCTCATCGATGTGAGCCCTTGCATTCAGGCAGG GCCGAGCAGTCCATCCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: DNA-Directed DNA Polymerase
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MACVPSTSPPDQVFALIDCNSFYASCERVFRPDLAKVPIVVLRNNNLSDTDC
Sequences:
>Translated_52_residues MACVPSTSPPDQVFALIDCNSFYASCERVFRPDLAKVPIVVLRNNNLSDTDC >Mature_51_residues ACVPSTSPPDQVFALIDCNSFYASCERVFRPDLAKVPIVVLRNNNLSDTDC
Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5734; Mature: 5602
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS50173 UMUC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACVPSTSPPDQVFALIDCNSFYASCERVFRPDLAKVPIVVLRNNNLSDTDC CCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure ACVPSTSPPDQVFALIDCNSFYASCERVFRPDLAKVPIVVLRNNNLSDTDC CCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA