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The map label for this gene is yecD [C]

Identifier: 66045134

GI number: 66045134

Start: 2163038

End: 2163604

Strand: Direct

Name: yecD [C]

Synonym: Psyr_1893

Alternate gene names: 66045134

Gene position: 2163038-2163604 (Clockwise)

Preceding gene: 66045129

Following gene: 66045138

Centisome position: 35.5

GC content: 59.79

Gene sequence:

>567_bases
ATGGATATTCAAGGCAACAGCGCGCTGATCCTGATCGACCTGCAGCAGGGCATCCATCATCCCAGGCTAGGGCGACGCAA
TAACCCGCTGGCTGAGACCCATGTAAGCGCTCTGCTCGATGCCTGGCGGCAATCCGGGCGGGCGGTGATTCACGTCCGGC
ATTTTTCGACGTCACCCGAATCAGTGTTCTGGCCGCAACAGTCAGGGGTCGAGTACCAGCCAGCGTTCGTGCCGCAAGCC
GATGAGCGTGAGCTGAGCAAGCAGGTCCCCGATGCGTTTTGCGGGTCCTTTCTGGAAATGTGGTTACGCTCCGACGGGAT
CAGGCAGCTGGTGATCGCCGGTGTGGTCACCAACAACTCTGTCGAGTCGACCGCGCGCAGTGGCGGTAATCTGGGGTTTG
ACGTGCTGGTTGCGCACGATGCCTGCTTTACCTTTGATCAAAAGGACTTCTTCGGCACGCCGCGCAGTGCCGAAGAGGTG
CACGCAATGTCGCTGGCCAATCTGCATGGCGAGTACGCTACGGTCCTGTCGACGGCGCAGATTCTCCAGCAGGTGGCTGT
CGAATAA

Upstream 100 bases:

>100_bases
GGGGCAGGTCTCGGACAAGCCTGAGGCTGTCGACGATTGCGACCAGAATAGACCTTGATTGCGATAGTCTTGCTGAACCA
AAAGTTCGGATTGATTCATC

Downstream 100 bases:

>100_bases
GCGCCTGACGGGCTTACTTGCGGGTTTTCTTCGGTGCGGCGGGCAATGGGGCGAACAGCGCCTGCAAATCTTCGTCGCGC
AGCTTCCAGTCACCGGTTGT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDIQGNSALILIDLQQGIHHPRLGRRNNPLAETHVSALLDAWRQSGRAVIHVRHFSTSPESVFWPQQSGVEYQPAFVPQA
DERELSKQVPDAFCGSFLEMWLRSDGIRQLVIAGVVTNNSVESTARSGGNLGFDVLVAHDACFTFDQKDFFGTPRSAEEV
HAMSLANLHGEYATVLSTAQILQQVAVE

Sequences:

>Translated_188_residues
MDIQGNSALILIDLQQGIHHPRLGRRNNPLAETHVSALLDAWRQSGRAVIHVRHFSTSPESVFWPQQSGVEYQPAFVPQA
DERELSKQVPDAFCGSFLEMWLRSDGIRQLVIAGVVTNNSVESTARSGGNLGFDVLVAHDACFTFDQKDFFGTPRSAEEV
HAMSLANLHGEYATVLSTAQILQQVAVE
>Mature_188_residues
MDIQGNSALILIDLQQGIHHPRLGRRNNPLAETHVSALLDAWRQSGRAVIHVRHFSTSPESVFWPQQSGVEYQPAFVPQA
DERELSKQVPDAFCGSFLEMWLRSDGIRQLVIAGVVTNNSVESTARSGGNLGFDVLVAHDACFTFDQKDFFGTPRSAEEV
HAMSLANLHGEYATVLSTAQILQQVAVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=189, Percent_Identity=31.7460317460317, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20724; Mature: 20724

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQGNSALILIDLQQGIHHPRLGRRNNPLAETHVSALLDAWRQSGRAVIHVRHFSTSPE
CCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
SVFWPQQSGVEYQPAFVPQADERELSKQVPDAFCGSFLEMWLRSDGIRQLVIAGVVTNNS
CEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHEEHHHHHHCCCC
VESTARSGGNLGFDVLVAHDACFTFDQKDFFGTPRSAEEVHAMSLANLHGEYATVLSTAQ
HHHHHHCCCCCCEEEEEECCHHEEECCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
ILQQVAVE
HHHHHHCC
>Mature Secondary Structure
MDIQGNSALILIDLQQGIHHPRLGRRNNPLAETHVSALLDAWRQSGRAVIHVRHFSTSPE
CCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
SVFWPQQSGVEYQPAFVPQADERELSKQVPDAFCGSFLEMWLRSDGIRQLVIAGVVTNNS
CEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHEEHHHHHHCCCC
VESTARSGGNLGFDVLVAHDACFTFDQKDFFGTPRSAEEVHAMSLANLHGEYATVLSTAQ
HHHHHHCCCCCCEEEEEECCHHEEECCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
ILQQVAVE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA